Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2124 ATGAACCTCTCTCACACCTCCAACACCAACAACAACGTTAACACCTCTAACAACCAGGCTTGCGCTGCCTGTAAATATCGTCGCAGGAAGTGCACTCCTGATTGCATTCTCGCTCCTTATTTCCCTTACGATCGCCCTCGTCAATTCCTCAATGCTCACAAACTGTTCGGTGTCCGAAACATTACCAAAATCATTGAAAGCCTTGAGCCTTGTGACAAGGACCAAGCCATGCGGACCATCATTTACCAGTCCGACATGCGAGCTAATGACCCTGTCGGAGGTTGTTTTAGATACATTCAAGAGCTCGAAGCTCAGATCCATTTCCACAAGGCTAAACTTGACCTTGTTCTTCAGCACCTCGACGTTTTTCGCACTCAAGCTCATCGTCATTATCATTGCCATCATTCTCATCATATCAATATCAATATGGATAATTTGGATTTATGTAACCCTAATGATAATAATATTGCATCGCCGCTACCTCCTGGATGTTATCATCATCAGTCGCCTCAACAACAAGATCCGTATATGATGGTTCAGGAGCATCACAATAACGATGTTGTTCCTAATTTGCGGGACGATGTTAATTCTTGGGCTGTGCAAGAATCCATGTCGCTGTCGTTGCATAACAAAAAAGGCAACGATGAGAGTGGTTATGTCGGTGATGAATTGTACAATAATGATCAGAAATCTTCGTCGTCTATGCTTGAAATTCAATGCCATGACAGGAACGACATTGGTTTTGAACCTGAAGAATTAGTTGAACGGAGTGATGAAGTGATCTCGTTCAAGATAGAGAATGCAGTAGTAAATGAAGAGGTTAATTGCATCCAACAAGCTCAAGACCATGACCTAAAAGGTGCTGCAACATTGTTCGCCCTCACAAATTGTACTAGCTGA 900 0.4289 MNLSHTSNTNNNVNTSNNQACAACKYRRRKCTPDCILAPYFPYDRPRQFLNAHKLFGVRNITKIIESLEPCDKDQAMRTIIYQSDMRANDPVGGCFRYIQELEAQIHFHKAKLDLVLQHLDVFRTQAHRHYHCHHSHHININMDNLDLCNPNDNNIASPLPPGCYHHQSPQQQDPYMMVQEHHNNDVVPNLRDDVNSWAVQESMSLSLHNKKGNDESGYVGDELYNNDQKSSSSMLEIQCHDRNDIGFEPEELVERSDEVISFKIENAVVNEEVNCIQQAQDHDLKGAATLFALTNCTS 299
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2124 299 ProSiteProfiles LOB domain profile. 19 120 IPR004883 -
Prci12g2124 299 Pfam Lateral organ boundaries (LOB) domain 20 115 IPR004883 -
Prci12g2124 299 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 17 171 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2124 Prci-Chr12 38655461 38657653 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2124 19 132 AS2 family AT3G13850 66.667 1.16e-51 169
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Prci12g2124 LOB 3.2e-34 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2124 - - vum:124830493 280.411