Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2122 ATGGCGCTGGGGCTGTTGTTTTTCCTGATAATTAACCTACATTTAGTTATCAGTGCCACACATTTTCATGGATATGCAGTCACCAATCAACACCATTCCAGAAGCCACAAAAGTATTGCTCTTCCCCCAACCAAGTCATCTTATGGAGTTCTTGCAAGTATTGCACTTCCACCTTCTAAGTCATTATCTAAAGCTCCTATAAAGGAACGGACCCATGGTTTAGTTGATTCTCCAATATTACCTCATAAGCATCACCATTCCAGAAGAAAGTCCAGTGAACCAGCACCAGAGCCAACTTACTCGGTTCATCCCCCTACCTACAGTCATCAAGGCATAGGTCCTTCTGTCTTCGAACCACAACCTCCTTTCTCTTTACCAACAGGCTGGAAATTACCTGCACCTGCACCTGCACCATCACCAGCAGTTCTATCAGGCCACTTAAATGTGCCCTCTCCTTCCCCTGGAATTTCATCTCAAGGTTCATCATCGAGGAAGATGAAGACTCCACCAATAGCACCTGTTTTGGGTCTGCCACCTCCACCTCCTAATAAGGATTGTATATGGGTGACTTGCTCAGAGCCCTTTACATATGCACCTCCTGGATCACCTTGTGGTTGTGTATGGCCACTTCAAGTTAAGCTTCAACTTGGCATTTCAATATACAAGTTCTTTCCATTGGTGTCAAAGCTAGCTGAGGAAATTGCTGTCAGTGTTTTACTGAATCATAACCAGGTTCGCATCGTGGGAGCTGATGAAGCTAGCCAGCAACTGGAGAAAACTATTGTTCTCGTAAACTTGGTACCCAAAGGATCAAGATTTGATGATGCAACCGCATTTTCAATATATAAGAAATTCTGGCACCGGGAGATCCACACAGATGCTTCACTTTTTGGTGCCTGTGAAGTACTATATGTTCATTATCCAGGTCTTCCTCCTTCTCCACCTTCAACTCCTTCAGGCATTTCTAATGCAGATGATAGCCCATTATTCCCCGATCATGACAACAATGGAACAATGATGAAACCTTTGGGAGTGGCTATACCAAGGAAAGAAAAGACAGGGAGCGGGAAAAGCACAATTTTAGTAATTGTGCTGTCATCTTTTACAGCTTTTATTATATTTCTTGGATTTGCTTGCCTTTGTCTGATGAAACGTTGCCCTTGTGTTCATGAATCTAAACAAATTCCAAAAGCTGTTCCATCCTCTTCAAAACTGTCAGGGACGGCCACGTCATTGACTAATAGGAGCATGCCAAGCACTGGTTCTATGCCCTCAAGTTCTAGAACAGTAACATATACAGGATCTGCCAAGACTTTTACTCTGAATGACATAGAGAAAGCAACTAATAACTTTGATGCTTCAAGAATATTAGGAGAAGGGGGCTTTGGGCCTGTTTTTAAAGGGGTCCTATGTGATGGAAGGGATGTGGCTGTGAAGATTCTCAAGAGAGATGATCAGCATGGTGGCCGTGAGTTCTTAGCAGAAGTTGAGATGCTTAGCCGTCTGCACCATAGAAATTTAGTTAAATTAATAGGTATATGCATAGAGAAACAGACTCGGTGCCTCATCTATGAGCTTGTCCCTAATGGAAGTGTAGAATCCCACTTACATGGTGCTGACAAGGAAACTAACCCACTTGATTGGAATGCCCGGATGAAGATTGCACTTGGAGCAGCTCGGGCCTTGGCTTATCTGCATGAAGATTCAAATCCATGTGTCATACATCGGGACTTCAAATCCAGCAATATCTTGTTGGAACATGATTTTACACCAAAGGTTTCAGATTTTGGATTAGCAAGAACTGCCCTGGAAGAGGGAAACAAGCACATCTCCACACATGTTATGGGAACATTTGGCTACCTAGCACCCGAATATGCAATGACGGGCCATCTTTTGGTCAAAAGTGATGTTTACAGTTATGGAGTTGTACTCCTTGAGCTCCTAACTGGAAGAAAGCCTGTAGATTTCTCACAACCACCTGGTCAAGAAAACCTTGTTACTTGGATTCGTCCACTTCTCACGAGTAAGGATGGTTTACAGATGATCATAGACCCGGTTGTAAAGTCTGAAATAACTGATGATTCAGTTGTAAAAGTTGCAGCAATTGCATCAATGTGTATACAACTGGAAGTCTCTCAACGCCCATTCATGGGCGAAGTTGTTCAGGCTTTGAAGTTGGTTTGCAGTGAGCTTGAGGAAAAAAGCACAAGAAGATTAAGGAGTTTCCGAGAAGAGGGCCCTCAAGCCAACGTTGATGAACAATCTTCTAGAATTTCAGGTGATATAGTGGACTTTTCAGATCATAAATCCAAAGTAGCATTATCAACGTCTGAGTTTTTCAGCACATCAGGCCAGTATTTTAAGTCCTTCAAGAGGCATTCAACTTCAGGGCCTCTCACTACAGGAAAGAAAAAGCATTTCTGGCAGAAACTGAGGAGTTTGTCTCGAGGGAGCATGAGTGAGCATGGTTCTTCAGCTCAACGATGGTCTGGTTCTCAGTAA 2502 0.4313 MALGLLFFLIINLHLVISATHFHGYAVTNQHHSRSHKSIALPPTKSSYGVLASIALPPSKSLSKAPIKERTHGLVDSPILPHKHHHSRRKSSEPAPEPTYSVHPPTYSHQGIGPSVFEPQPPFSLPTGWKLPAPAPAPSPAVLSGHLNVPSPSPGISSQGSSSRKMKTPPIAPVLGLPPPPPNKDCIWVTCSEPFTYAPPGSPCGCVWPLQVKLQLGISIYKFFPLVSKLAEEIAVSVLLNHNQVRIVGADEASQQLEKTIVLVNLVPKGSRFDDATAFSIYKKFWHREIHTDASLFGACEVLYVHYPGLPPSPPSTPSGISNADDSPLFPDHDNNGTMMKPLGVAIPRKEKTGSGKSTILVIVLSSFTAFIIFLGFACLCLMKRCPCVHESKQIPKAVPSSSKLSGTATSLTNRSMPSTGSMPSSSRTVTYTGSAKTFTLNDIEKATNNFDASRILGEGGFGPVFKGVLCDGRDVAVKILKRDDQHGGREFLAEVEMLSRLHHRNLVKLIGICIEKQTRCLIYELVPNGSVESHLHGADKETNPLDWNARMKIALGAARALAYLHEDSNPCVIHRDFKSSNILLEHDFTPKVSDFGLARTALEEGNKHISTHVMGTFGYLAPEYAMTGHLLVKSDVYSYGVVLLELLTGRKPVDFSQPPGQENLVTWIRPLLTSKDGLQMIIDPVVKSEITDDSVVKVAAIASMCIQLEVSQRPFMGEVVQALKLVCSELEEKSTRRLRSFREEGPQANVDEQSSRISGDIVDFSDHKSKVALSTSEFFSTSGQYFKSFKRHSTSGPLTTGKKKHFWQKLRSLSRGSMSEHGSSAQRWSGSQ 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2122 833 FunFam receptor-like serine/threonine-protein kinase ALE2 424 526 - -
Prci12g2122 833 PANTHER OS01G0750732 PROTEIN 178 746 - -
Prci12g2122 833 CDD STKc_IRAK 457 725 - -
Prci12g2122 833 SUPERFAMILY Protein kinase-like (PK-like) 424 724 IPR011009 -
Prci12g2122 833 Gene3D Transferase(Phosphotransferase) domain 1 527 746 - -
Prci12g2122 833 Gene3D Phosphorylase Kinase; domain 1 422 526 - -
Prci12g2122 833 MobiDBLite consensus disorder prediction 72 119 - -
Prci12g2122 833 MobiDBLite consensus disorder prediction 814 833 - -
Prci12g2122 833 FunFam Receptor-like serine/threonine-protein kinase ALE2 527 741 - -
Prci12g2122 833 ProSiteProfiles Protein kinase domain profile. 451 727 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2122 833 Pfam Protein tyrosine and serine/threonine kinase 454 724 IPR001245 GO:0004672|GO:0006468
Prci12g2122 833 MobiDBLite consensus disorder prediction 399 429 - -
Prci12g2122 833 ProSitePatterns Serine/Threonine protein kinases active-site signature. 573 585 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2122 Prci-Chr12 38629020 38634373 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2122 183 824 Receptor kinase-like Gene Family AT5G56890 58.735 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_Extensin Prci12g2122 PK_Tyr_Ser-Thr 2.4e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2122 - - gmx:100814040 1108.2