Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2104 ATGGAGACAAAACTTGAGCTCCTCCATGGAACAATTGAAGCCACCATCTTCAATGCTACTCCTTATGCACCTGCATTTCCCTTCAATTGTATCCATGCAAATGGGAAGCCTGCATATGTGACCATCAAGTTAGGCCACAAGAAGGTAGCAAAGACAAGTCAAGAGCGAGATCGTGTGTGGAATCAAACCTTTCAGATCCCATGTGCTCACCCAGCAGATTCAATTATCACCCTCACATTGAAAACATCATGCTCCATATTGGGGAGATTCCATATTAAGGCTCAGCAGTTACTCAAGGAAGAAAGTTTAATCAATGGTTTCTTCCCTCTCCTTATGGAAAATGGAAAACGAAACCTTCAACTCAAGTTAAGGTTTCTATTGTGGTTCAAACCAGCAGGGATTGAACCAAGTTGGGAAAAGCTACTAAGGGATGGGGAATTTCATGGCTTAAGGGATGCCTCGTTTCCACAAAGGTCCAATTGTCAGGTCAAGCTTTATCATGATGCTCACCATTCTTTCACTTTTCAACCTCCTTTTGATCACTGTGGAGCTCCAAGAAGGCTATGGGAGGATGTGTATAAAGCCATTGAGGGTGCAAAGTACTTAGTTTACATTGCAGGGTGGTCCTTCAATCCTAAGATGGTTCTGGTTAGAGATCCTGAAACGGAAATCCCATATGCAAGAGGAGTAAAGCTTGGTGAGCTGTTAAAAAGGAAGGCAGAGGAAGGAGTGGCAGTGAGGGTGATGCTTTGGGATGATGAAACATCTTTGTCATTTATTAAGAACAAAGGCATGATGAATACCCATGACGAGGATGCTTTTGCATACTTCAAACATACAAGAGTTATATGCAGAAAGTGTCCCAGATTACACCATAAGTTCCCGACACTGTTTTCTCACCATCAGAAGACTATAACCGTTGATGTCAAAGCACCGAAGTCTGTGAATGATAGAGAAATTATGAGCTTTGTTGGTGGGTTGGATTTGTGTGATGGCAGGTATGACACAGAGCAGCACTCATTGTTTCAAACCCTAAATAGTGAATCCCATCGCTATGATTTCTATCAGACAAATATTGCAGGAGCTAGCCTTAATAAAGGAGGGCCAAGAGAGCCTTGGCATGATGCTCATGCTTGTGTTATAGGTGGTGCTGCTTGGGACGTGTTAACAAATTTCGAGCAAAGATGGAGAAAGCAGTGTAATCCTTCCCTTTTAGTCCCTGCAAGTGCCTTAGCAAATCTCATGCCCCAAAATTGTTCAAGCATTCCTATTGAGAGGAATTGGAAAGTTCAAGTATATAGATCAATTGACCATATCTCTGCTTACCAATTGTTTAGAAAGTTTACTGTAGAAAGGAGCATCCATGATGCTTATGTTGAAGCAATCAGGCGTGCTGATAGGTTTATATACATTGAAAACCAGTATTTCACTGGGGGATGCGATTTGTGGGACAATAACAAGAATAGTGGATGCAGAAATATTATTCCCATTGAGATAGCACTCAAGGTGGCAAGTAAGATTAAAGCGAAGAAGAGATTTGCAGTGTATGTAGTGATTCCAATGTGGCCAGAAGGATTACCTGAAAGTGAAACAGTTCAGGACATCCTGCATTGGACCAGAGAAACAGTAGCAATGATGTATAGGTTGATTGGAGAAGCAATACAAGAGAGTGGGGAAGCAGGGCACCCAAGAGACTACTTGAATTTCTTTTGCCTAGCAAATAGGGAACAGAAAGGGGAAGGGGAGTACCTGCCGCCACATTCTCCTCACCCTGAAACACAATATTGGAATGCCCAAAAAAGTAGAAGGTTCATGGTGTATGTCCACTCCAAGCTCATGATAGTGGACGACCTGTACTTGTTGATAGGGTCGGCTAACGTGAACCAGAGATCCATGGATGGGCAAAGAGACACTGAGATAGCCATAGGTTGCTACCAATGGCAAGATGCGGATTCCAGCAACCAAGTGATCAATCGCGGCGAGATTCACGCATACAGGATGTCACTGTGGTATGAGCACAGTAGGTGCGCAGAGGAATGGTTGATGGAGCCAGAGAGATTGGAATGCGTAAGGAAAATGCGATCGATAGGAGATCGAATGTGGGAAATCTACAGTGGCGAAGAAATTGTGGACATGGAAGGCGTTCATCTGGTGAGTTACCCTTTGAAGGTAACGCAGGAAGGTTTGGTGGATGTGAGTGGGAGCGGGTCCCGCTTTCCCGATACAGAGTGTCCAGTGAAGGGGAAGAGATCAAAGGTGTTGCCTCCTATTTTCACTACTTAA 2283 0.4371 METKLELLHGTIEATIFNATPYAPAFPFNCIHANGKPAYVTIKLGHKKVAKTSQERDRVWNQTFQIPCAHPADSIITLTLKTSCSILGRFHIKAQQLLKEESLINGFFPLLMENGKRNLQLKLRFLLWFKPAGIEPSWEKLLRDGEFHGLRDASFPQRSNCQVKLYHDAHHSFTFQPPFDHCGAPRRLWEDVYKAIEGAKYLVYIAGWSFNPKMVLVRDPETEIPYARGVKLGELLKRKAEEGVAVRVMLWDDETSLSFIKNKGMMNTHDEDAFAYFKHTRVICRKCPRLHHKFPTLFSHHQKTITVDVKAPKSVNDREIMSFVGGLDLCDGRYDTEQHSLFQTLNSESHRYDFYQTNIAGASLNKGGPREPWHDAHACVIGGAAWDVLTNFEQRWRKQCNPSLLVPASALANLMPQNCSSIPIERNWKVQVYRSIDHISAYQLFRKFTVERSIHDAYVEAIRRADRFIYIENQYFTGGCDLWDNNKNSGCRNIIPIEIALKVASKIKAKKRFAVYVVIPMWPEGLPESETVQDILHWTRETVAMMYRLIGEAIQESGEAGHPRDYLNFFCLANREQKGEGEYLPPHSPHPETQYWNAQKSRRFMVYVHSKLMIVDDLYLLIGSANVNQRSMDGQRDTEIAIGCYQWQDADSSNQVINRGEIHAYRMSLWYEHSRCAEEWLMEPERLECVRKMRSIGDRMWEIYSGEEIVDMEGVHLVSYPLKVTQEGLVDVSGSGSRFPDTECPVKGKRSKVLPPIFTT 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2104 760 PANTHER PHOSPHOLIPASE D 4 742 IPR015679 -
Prci12g2104 760 SMART pld_4 296 333 IPR001736 GO:0003824
Prci12g2104 760 SMART pld_4 604 631 IPR001736 GO:0003824
Prci12g2104 760 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 7 122 IPR035892 -
Prci12g2104 760 Pfam Phospholipase D Active site motif 297 333 IPR001736 GO:0003824
Prci12g2104 760 Pfam Phospholipase D Active site motif 607 631 IPR001736 GO:0003824
Prci12g2104 760 Gene3D C2 domain 28 128 IPR035892 -
Prci12g2104 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 296 333 IPR001736 GO:0003824
Prci12g2104 760 PIRSF PLD_plant 3 760 IPR011402 GO:0004630|GO:0005509|GO:0016020|GO:0046470
Prci12g2104 760 Gene3D Endonuclease Chain A 170 417 - -
Prci12g2104 760 Pfam Phospholipase D C terminal 679 749 IPR024632 -
Prci12g2104 760 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 604 631 IPR001736 GO:0003824
Prci12g2104 760 SUPERFAMILY Phospholipase D/nuclease 146 411 - -
Prci12g2104 760 SUPERFAMILY Phospholipase D/nuclease 424 688 - -
Prci12g2104 760 Pfam C2 domain 38 110 IPR000008 -
Prci12g2104 760 Gene3D Endonuclease Chain A 418 662 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2104 Prci-Chr12 38480663 38484745 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2104 30 760 Phospholipase D Gene Family (Wang group) AT1G55180 63.747 0.0 982
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2104 K01115 - gmx:100807431 1269.6
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2104 12 38480663 38484745 Prci12g2104 12 38480663 38484745 ECH