Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2102 ATGAATCGAGAACAGAAGCGAGGGAAGCAAGAAAAAGGTTCCGATGGTTCTGAGAAGGTCATTGTTGCCGTGAAGGCATCGAAGGAAATCCCTAGGACTGCTCTTGTCTGGTCTCTAACTCATGTTGTTCAACCTGGGGATTGCATTACTTTGTTAGTGGTTGTGCCTCCCCAAAGCTCAGGTAGAAGATTATGGGTGTTTCCAAGATTTGCTGGTGACTGTGCCAGCGGTAGCAAGAAGTCTCCTTCAGGAACAACTTCAGAGCAGAAGTGTGATATCACTGATTCTTGTTCCCAGATGATCCTCAGGCTTCACGACGTTTATGATCCAAATAAGATAAATGTCAAGATCAAAATTGTATCTGGATCTCCTTGTGGAGCAGTGGCTACAGAGGCCAAGAAAGTCCTGGCCAATTGGGTTGTCTTAGACAAGGATCTCAAACATGAGGAAAAACGCTGCATGGAAGAATTGCAATGCAACATTGTAGCTATGAAGCGATCTCAACCAAAAGTTCTCCGCTTGAATTTGGTTGGATCACAAAAGAAGGATCTTGAAGAAGCCAGTCCATTACCTTCTGAGAAAGAAATGCCTGGGAAACAAGCCAAACAGAAGAACGAATCTTTAAATTCCATAAAAGCACCTGTTGTCACTCCAACTAGCAGCCCAGAGCAAGAGACACCATTTACTGCAACTGAAGCTGGTACCTCATCAGTTTCGAGCTCAGATCCTGGAACCTCACCATTTTTTGTCTCAGAGATCAATGGTGAATTAAAGAAAGAGGAGACAATTAAGGAAAATGAAGAACTTGATGATAGTATTTCAGACACAGACAGTGAAAATATGTCCACATCCTCAGCAAGCTTGAGATTCCGGCCATGGATCTCAGAAATGCTTCTACATAGATCATCTCAATGCAAAGAAGACAGATCTGAGGGATCTCATGATAAGCCTCAAACATCTACAACCAGAGCCTTGCTTGAAAAGCTCTCTAGGCTTGAGAGAGATTCTGGATTTGAAATTTCAACCTATAGGAGTGACTTGGATTTCAGTGGAAATGTAAGAGATGCTATAGCATTATCTAGAAATGCCCCTCCTGGTCCACCTCCATTATGTTCAATATGTCAACACAAAGCACCGGTTTTTGGAAAACCTCCAAGGTGGTTTAGCTATGCTGAGTTGGAGCTTGCTACTGGAGGATTTTCGCAAGCCAACTTCTTGGCAGAAGGAGGATTTGGATCTGTTCACAGAGGGGTTCTATCAGATGGGCAAGTCATTGCTGTCAAGCAACATAAATTAGCTAGTTCACAGGGTGATCATGAATTTTGTTCAGAGGTAGAAGTCCTAAGCTGTGCCCAGCATCGAAATGTTGTTATGCTGATTGGGTTTTGTATAGAGGATAAGAGAAGGCTACTGGTTTATGAATATATATGCAATGGATCACTGGATTCTCATTTATATGGGAGACAACGGGGTACATTAGAGTGGTCTGCAAGGCAAAAGATTGCTGTTGGAGCTGCTCGAGGGCTGCGATATCTTCATGAAGAATGCAGAGTGGGTTGCATTATCCACAGGGACATGCGCCCAAACAATATTCTCATCACCCATGATTTTGAACCATTGGTTGGTGATTTTGGACTGGCAAGGTGGCAGCCTGATGGAGACACTGAGGTGGAAACTAGAGTCATTGGAACGTTTGGGTATTTGGCTCCAGAATATGCTCAGAGTGGCCAAATCACTGAAAAGGCTGATGTTTATTCCTTCGGAGTGGTATTAGTGGAGCTCGTTACTGGGAGAAAAGCTGTGGATCTCAATCGACCTAAAGGGCAGCAATGTCTTACTGAATGGGTAAGCTAG 1854 0.4364 MNREQKRGKQEKGSDGSEKVIVAVKASKEIPRTALVWSLTHVVQPGDCITLLVVVPPQSSGRRLWVFPRFAGDCASGSKKSPSGTTSEQKCDITDSCSQMILRLHDVYDPNKINVKIKIVSGSPCGAVATEAKKVLANWVVLDKDLKHEEKRCMEELQCNIVAMKRSQPKVLRLNLVGSQKKDLEEASPLPSEKEMPGKQAKQKNESLNSIKAPVVTPTSSPEQETPFTATEAGTSSVSSSDPGTSPFFVSEINGELKKEETIKENEELDDSISDTDSENMSTSSASLRFRPWISEMLLHRSSQCKEDRSEGSHDKPQTSTTRALLEKLSRLERDSGFEISTYRSDLDFSGNVRDAIALSRNAPPGPPPLCSICQHKAPVFGKPPRWFSYAELELATGGFSQANFLAEGGFGSVHRGVLSDGQVIAVKQHKLASSQGDHEFCSEVEVLSCAQHRNVVMLIGFCIEDKRRLLVYEYICNGSLDSHLYGRQRGTLEWSARQKIAVGAARGLRYLHEECRVGCIIHRDMRPNNILITHDFEPLVGDFGLARWQPDGDTEVETRVIGTFGYLAPEYAQSGQITEKADVYSFGVVLVELVTGRKAVDLNRPKGQQCLTEWVS 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2102 617 MobiDBLite consensus disorder prediction 181 285 - -
Prci12g2102 617 ProSiteProfiles Protein kinase domain profile. 400 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2102 617 MobiDBLite consensus disorder prediction 186 201 - -
Prci12g2102 617 FunFam Dual-specific kinase DSK1-like 11 165 - -
Prci12g2102 617 MobiDBLite consensus disorder prediction 302 316 - -
Prci12g2102 617 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 372 475 - -
Prci12g2102 617 ProSitePatterns Tyrosine protein kinases specific active-site signature. 521 533 IPR008266 GO:0004672|GO:0006468
Prci12g2102 617 MobiDBLite consensus disorder prediction 202 248 - -
Prci12g2102 617 Gene3D Transferase(Phosphotransferase) domain 1 476 617 - -
Prci12g2102 617 Pfam Protein kinase domain 404 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2102 617 SUPERFAMILY Protein kinase-like (PK-like) 385 602 IPR011009 -
Prci12g2102 617 PANTHER OS01G0750732 PROTEIN 156 615 - -
Prci12g2102 617 FunFam Os07g0541700 protein 476 564 - -
Prci12g2102 617 Gene3D Phosphorylase Kinase; domain 1 372 475 - -
Prci12g2102 617 MobiDBLite consensus disorder prediction 302 323 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2102 Prci-Chr12 38468694 38473851 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2102 381 616 Trihelix Transcription Factor Family AT1G26150 54.661 2.40e-86 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-2 Prci12g2102 Pkinase 8.8e-41 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2102 - - gmx:100789216 1073.92