Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2094 ATGCAAGACCCGACGGCATTCCAGCCGATGAAACCCCCCTTTCCTGAACAAGAACACCTTAAATGTCCTCGTTGTGATTCCACCAACACCAAATTCTGCTACTACAACAACTATAATCTCTCGCAGCCTCGTCATTTTTGCAAGAATTGCAGAAGGTATTGGACCAAAGGCGGTGCTCTCCGAAACATACCAGTCGGTGGTGGAAGCCGAAAGAACACGAAACGATCGTCAACTGCCAAACGCCCTTCTGCTTCTTCTTCTTCGCCATCAGCATCATCTTCTCCTGCCTCAGTTCCGTCTGCATCAACAGCTGGTCCGGATCCTAACCCGCCCCGGTTTTGTGCCAACCTGAGTGGTCCCGTGAACCTTGGTGGGAGTTTCAGTTCTCTTCTGGCATCAACTGTGCAGTGGGGGGGCTTATTGGAGGGTTTGAATTCAAGTGGGTCTGGATTGAAAATGATGCAACTGGGTGGATTTGGAGAGAATGTGGGTTCTGGCCATGGGAAGAATTCGGATTCGGGTCGAAGCCCGGGGATGGAAAGGCAGAGCAATGGTAATTCGGAGGGCTTTCTGGGTATGCAAAATGTTGATTCAAACTGTTGGAATGGTAGTAGCAATGGGTGGTCTGATCTTGCAATATATACACCGGGGTCAAGCTATCAGTAG 666 0.4985 MQDPTAFQPMKPPFPEQEHLKCPRCDSTNTKFCYYNNYNLSQPRHFCKNCRRYWTKGGALRNIPVGGGSRKNTKRSSTAKRPSASSSSPSASSSPASVPSASTAGPDPNPPRFCANLSGPVNLGGSFSSLLASTVQWGGLLEGLNSSGSGLKMMQLGGFGENVGSGHGKNSDSGRSPGMERQSNGNSEGFLGMQNVDSNCWNGSSNGWSDLAIYTPGSSYQ 221
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2094 221 ProSitePatterns Zinc finger Dof-type signature. 22 58 IPR003851 GO:0003677|GO:0006355
Prci12g2094 221 MobiDBLite consensus disorder prediction 1 20 - -
Prci12g2094 221 MobiDBLite consensus disorder prediction 160 192 - -
Prci12g2094 221 ProSiteProfiles Zinc finger Dof-type profile. 20 74 IPR003851 GO:0003677|GO:0006355
Prci12g2094 221 MobiDBLite consensus disorder prediction 61 113 - -
Prci12g2094 221 MobiDBLite consensus disorder prediction 166 192 - -
Prci12g2094 221 Pfam Dof domain, zinc finger 18 74 IPR003851 GO:0003677|GO:0006355
Prci12g2094 221 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 16 167 IPR045174 GO:0003700|GO:0006355
Prci12g2094 221 MobiDBLite consensus disorder prediction 69 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2094 Prci-Chr12 38393604 38395287 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2094 11 141 C2C2-Dof Transcription Factor Family AT1G51700 58.519 3.12e-48 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Prci12g2094 zf-Dof 2.4e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2094 - - gmx:100798927 274.633
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0738 13 6143337 6145284 Prci12g2094 12 38393604 38395287 CCT
Prci12g2094 12 38393604 38395287 Prci12g2094 12 38393604 38395287 ECH