Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci12g2073 | ATGGCAGGACATGTTCTATTTGCATTGTTTCAACTTGCTTTGACTCTTGCAGTTCTTGTTCAACCCAAAAATCAGTCAGGATTCATCAGTATTGATTGTGGACTCGTGGATAAACTAAACTACACAGATGAAACTACTTCAATCTATTACACATCAGATGCCAACATCATATCCAGTGGAATTAGTCACAGTATATCATCCAAATATAAGACACAGACTCTTAAAAGGCAGTTCTGGAATGTTCGAAGTTTCCCAGAAGGAACTAGGAACTGCTATACCCTTGATGCTTCTCGAGGAAGTAGCAGCAAGAACCTAGTGAGAGCCATGTTCATGTATGGAAACTATGATGGTGAAAACTCTCTTCCCGAATTTGACATCTATCTTGGAGCCAAGTGGTGGGACTCTCTGAGGTTTCAGAATGCATCCGATATAGTGATCAAGGAAATCATTTATGTTGCTTCAGCTGATTATATTCATGTTTGCCTTTTTAACACCAACAATGGCACACCTTTCATATCAGTGCTGGAGCTTAGAGTTCTTGACAATGATGCCTATTTTCTTACCTCTATGGAGCTCTTGGCTCGGCACGATTTAGGGTTGCAGGATGGTGAATTAATCAGGTACCCAGATGACATGTATGATAGAATATGGACACCTTATAACTCAAAAGACTGGAAACAGATAAACACCTCACTCCCTGTAGACCAAGGATCATCATCATCAATAGCAGCATCATCATTCAGTTTCATAACATTTCCACCATTCAACGTCATGAGAACAGCAGCAATTCCGGCAAATGTCAGCAACAACATGGAATTTCACTTCATGCAGTCCAGGGACAATGTCTCCATATTCTATGCATACTTGTACTTTGCTGAAATACAGAAACTCCAAGCAAATCAAATCAGACAGTTTAACATTTTCGTGAATGGAGACATTTTCATTGCTAATGCCAGTCCTTCATACCTCGAAACCAGTTATTATTTAGCTATACAAATTTCACCTTGGCTTAATATTTGGATCAATGAAACGGATAGATCGACTCTTCCTCCTCTTTTCAATGCCATTGAGGTATACATGGCTAAGAATCTCTCACAATCACAAACACAGCAAACAGATGTTGATGCTATCATGAGCATCAAATCATTCTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACAGGCATACTCGTGGGATGGCCTTAATTGCAGCTATGACGGATCTGGCCCACGAAGGATCACATCCTTGATCTTATCCTCTGCCGGATTAACTGGAAACATAGCTCCAGATATATCGAATTTAAAGTCTATTGAGTATTTGGATTTATCAGACAACAATTTAGTTGGGGATGTACCTAGTTTCCTGTCTCAAATGCAGTTCTTGAGGGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACGGTTCCAACAGAACTTATTGAGAGGTCAAAGAAAGGATCACTTAACCTCAGTTTTGGTGGAAATCCAAATCTTTGCTCTCCAGAAGGTTCATGCAAGAGTAGTAAGCCAAAAGTTGCCATTCTATTAGTTTCATCACTAGCAGGTGCCGTTACACTGCTGGCAGTCACAATTACCTTCCGCATCTTCAGAAAAAGACAAATAGTGAAGCTGAGTGCTCATTCCAGAATAAACAATGAGCTAGGGCTAAGGAAACAACAATTCACATATGCTGAAGTTTCTAGAATTACCAACAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCATCTCAAGTAACACTCAGGTTGCTGTCAAGATGCTCTCTCCTTCAGTTCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTCTTGCTAAAGTGCACCATAATCGGTTGACTGCTCTGATAGGATATTGTGATGATGGCTCCAACATAGCCCTCATCTATGAGTATATGGCTAATGGTGACTTGGCTAAACATTTATCAGAGAAAAATGAGAACATCTTGGATTGGAAACAACGGCTACAAATTGCAGTTGATGCTGCAGAAGGCTTGGAGTACCTGCATACGGGATGTAAGCCACCAATTGTTCACAGAGACGTCAAATCCCAAAACATCTTACTGAATGAATATTTCCGAGGAAAAATAGCTGATTTTGGATTGTCAAGAATCTTTCCTGATGACAGTGATACGCATATATTTACTAGGATAGCTGGCACCCCAGGATATCTTGATCCCGAGTACAATATGTCAAACAGGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGGATTGTTCTGCTTCAGATAATTACAGGACAACCTGCTATAGCCAAGACAGAAGAAAAATCTCACATAGTCCAATGGGTTAATCTCATGCTTCCTGAAAGCAAGATTGATGATATTGTGGATCCAAGATTAGAGGGAAACTTTGATAAAGATTCCGCAAGAAAAGCGTTGGATACTGCCATGGCTTGTGTGGTACCTTCTTCCCTGAATAGGCCAAAAATGAGTAACGTAGTGATGGAATTGAGACAATGTTTAGCTATGGAAACGGCTCATGGAGTTCGTAGTAAAATTGATTTCTCATTTGGTGGAATTAGTGGAGAGAGTTCTCTGGCTAGATAG | 2619 | 0.404 | MAGHVLFALFQLALTLAVLVQPKNQSGFISIDCGLVDKLNYTDETTSIYYTSDANIISSGISHSISSKYKTQTLKRQFWNVRSFPEGTRNCYTLDASRGSSSKNLVRAMFMYGNYDGENSLPEFDIYLGAKWWDSLRFQNASDIVIKEIIYVASADYIHVCLFNTNNGTPFISVLELRVLDNDAYFLTSMELLARHDLGLQDGELIRYPDDMYDRIWTPYNSKDWKQINTSLPVDQGSSSSIAASSFSFITFPPFNVMRTAAIPANVSNNMEFHFMQSRDNVSIFYAYLYFAEIQKLQANQIRQFNIFVNGDIFIANASPSYLETSYYLAIQISPWLNIWINETDRSTLPPLFNAIEVYMAKNLSQSQTQQTDVDAIMSIKSFYGIKRNWQGDPCTPQAYSWDGLNCSYDGSGPRRITSLILSSAGLTGNIAPDISNLKSIEYLDLSDNNLVGDVPSFLSQMQFLRVLNLEGNQLSGTVPTELIERSKKGSLNLSFGGNPNLCSPEGSCKSSKPKVAILLVSSLAGAVTLLAVTITFRIFRKRQIVKLSAHSRINNELGLRKQQFTYAEVSRITNNFEKVVGKGAFGTVYHGISSNTQVAVKMLSPSVQGYLQFQAEAKLLAKVHHNRLTALIGYCDDGSNIALIYEYMANGDLAKHLSEKNENILDWKQRLQIAVDAAEGLEYLHTGCKPPIVHRDVKSQNILLNEYFRGKIADFGLSRIFPDDSDTHIFTRIAGTPGYLDPEYNMSNRLTEKSDVYSFGIVLLQIITGQPAIAKTEEKSHIVQWVNLMLPESKIDDIVDPRLEGNFDKDSARKALDTAMACVVPSSLNRPKMSNVVMELRQCLAMETAHGVRSKIDFSFGGISGESSLAR | 872 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci12g2073 | 872 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 693 | 705 | IPR008271 | GO:0004672|GO:0006468 | |
Prci12g2073 | 872 | Pfam | Protein tyrosine and serine/threonine kinase | 577 | 784 | IPR001245 | GO:0004672|GO:0006468 | |
Prci12g2073 | 872 | FunFam | Leucine-rich repeat receptor-like kinase | 372 | 505 | - | - | |
Prci12g2073 | 872 | Gene3D | Ribonuclease Inhibitor | 374 | 496 | IPR032675 | - | |
Prci12g2073 | 872 | SUPERFAMILY | Protein kinase-like (PK-like) | 560 | 841 | IPR011009 | - | |
Prci12g2073 | 872 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 649 | 853 | - | - | |
Prci12g2073 | 872 | ProSitePatterns | Protein kinases ATP-binding region signature. | 581 | 602 | IPR017441 | GO:0005524 | |
Prci12g2073 | 872 | CDD | STKc_IRAK | 581 | 841 | - | - | |
Prci12g2073 | 872 | PANTHER | OS07G0107800 PROTEIN-RELATED | 29 | 845 | - | - | |
Prci12g2073 | 872 | Gene3D | Phosphorylase Kinase; domain 1 | 557 | 648 | - | - | |
Prci12g2073 | 872 | SUPERFAMILY | L domain-like | 397 | 495 | - | - | |
Prci12g2073 | 872 | Pfam | Malectin-like domain | 31 | 360 | IPR024788 | - | |
Prci12g2073 | 872 | ProSiteProfiles | Protein kinase domain profile. | 575 | 845 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci12g2073 | 872 | Gene3D | Transferase(Phosphotransferase) domain 1 | 649 | 859 | - | - | |
Prci12g2073 | 872 | SMART | serkin_6 | 575 | 845 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci12g2073 | Prci-Chr12 | 38242591 | 38248972 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci12g2073 | 5 | 852 | Receptor kinase-like Gene Family | AT2G19210 | 46.520 | 0.0 | 764 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Prci12g2073 | Malectin_like | 2.5e-98 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci12g2073 | - | - | gmx:100778537 | 1116.29 |