Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2073 ATGGCAGGACATGTTCTATTTGCATTGTTTCAACTTGCTTTGACTCTTGCAGTTCTTGTTCAACCCAAAAATCAGTCAGGATTCATCAGTATTGATTGTGGACTCGTGGATAAACTAAACTACACAGATGAAACTACTTCAATCTATTACACATCAGATGCCAACATCATATCCAGTGGAATTAGTCACAGTATATCATCCAAATATAAGACACAGACTCTTAAAAGGCAGTTCTGGAATGTTCGAAGTTTCCCAGAAGGAACTAGGAACTGCTATACCCTTGATGCTTCTCGAGGAAGTAGCAGCAAGAACCTAGTGAGAGCCATGTTCATGTATGGAAACTATGATGGTGAAAACTCTCTTCCCGAATTTGACATCTATCTTGGAGCCAAGTGGTGGGACTCTCTGAGGTTTCAGAATGCATCCGATATAGTGATCAAGGAAATCATTTATGTTGCTTCAGCTGATTATATTCATGTTTGCCTTTTTAACACCAACAATGGCACACCTTTCATATCAGTGCTGGAGCTTAGAGTTCTTGACAATGATGCCTATTTTCTTACCTCTATGGAGCTCTTGGCTCGGCACGATTTAGGGTTGCAGGATGGTGAATTAATCAGGTACCCAGATGACATGTATGATAGAATATGGACACCTTATAACTCAAAAGACTGGAAACAGATAAACACCTCACTCCCTGTAGACCAAGGATCATCATCATCAATAGCAGCATCATCATTCAGTTTCATAACATTTCCACCATTCAACGTCATGAGAACAGCAGCAATTCCGGCAAATGTCAGCAACAACATGGAATTTCACTTCATGCAGTCCAGGGACAATGTCTCCATATTCTATGCATACTTGTACTTTGCTGAAATACAGAAACTCCAAGCAAATCAAATCAGACAGTTTAACATTTTCGTGAATGGAGACATTTTCATTGCTAATGCCAGTCCTTCATACCTCGAAACCAGTTATTATTTAGCTATACAAATTTCACCTTGGCTTAATATTTGGATCAATGAAACGGATAGATCGACTCTTCCTCCTCTTTTCAATGCCATTGAGGTATACATGGCTAAGAATCTCTCACAATCACAAACACAGCAAACAGATGTTGATGCTATCATGAGCATCAAATCATTCTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACAGGCATACTCGTGGGATGGCCTTAATTGCAGCTATGACGGATCTGGCCCACGAAGGATCACATCCTTGATCTTATCCTCTGCCGGATTAACTGGAAACATAGCTCCAGATATATCGAATTTAAAGTCTATTGAGTATTTGGATTTATCAGACAACAATTTAGTTGGGGATGTACCTAGTTTCCTGTCTCAAATGCAGTTCTTGAGGGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACGGTTCCAACAGAACTTATTGAGAGGTCAAAGAAAGGATCACTTAACCTCAGTTTTGGTGGAAATCCAAATCTTTGCTCTCCAGAAGGTTCATGCAAGAGTAGTAAGCCAAAAGTTGCCATTCTATTAGTTTCATCACTAGCAGGTGCCGTTACACTGCTGGCAGTCACAATTACCTTCCGCATCTTCAGAAAAAGACAAATAGTGAAGCTGAGTGCTCATTCCAGAATAAACAATGAGCTAGGGCTAAGGAAACAACAATTCACATATGCTGAAGTTTCTAGAATTACCAACAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCATCTCAAGTAACACTCAGGTTGCTGTCAAGATGCTCTCTCCTTCAGTTCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTCTTGCTAAAGTGCACCATAATCGGTTGACTGCTCTGATAGGATATTGTGATGATGGCTCCAACATAGCCCTCATCTATGAGTATATGGCTAATGGTGACTTGGCTAAACATTTATCAGAGAAAAATGAGAACATCTTGGATTGGAAACAACGGCTACAAATTGCAGTTGATGCTGCAGAAGGCTTGGAGTACCTGCATACGGGATGTAAGCCACCAATTGTTCACAGAGACGTCAAATCCCAAAACATCTTACTGAATGAATATTTCCGAGGAAAAATAGCTGATTTTGGATTGTCAAGAATCTTTCCTGATGACAGTGATACGCATATATTTACTAGGATAGCTGGCACCCCAGGATATCTTGATCCCGAGTACAATATGTCAAACAGGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGGATTGTTCTGCTTCAGATAATTACAGGACAACCTGCTATAGCCAAGACAGAAGAAAAATCTCACATAGTCCAATGGGTTAATCTCATGCTTCCTGAAAGCAAGATTGATGATATTGTGGATCCAAGATTAGAGGGAAACTTTGATAAAGATTCCGCAAGAAAAGCGTTGGATACTGCCATGGCTTGTGTGGTACCTTCTTCCCTGAATAGGCCAAAAATGAGTAACGTAGTGATGGAATTGAGACAATGTTTAGCTATGGAAACGGCTCATGGAGTTCGTAGTAAAATTGATTTCTCATTTGGTGGAATTAGTGGAGAGAGTTCTCTGGCTAGATAG 2619 0.404 MAGHVLFALFQLALTLAVLVQPKNQSGFISIDCGLVDKLNYTDETTSIYYTSDANIISSGISHSISSKYKTQTLKRQFWNVRSFPEGTRNCYTLDASRGSSSKNLVRAMFMYGNYDGENSLPEFDIYLGAKWWDSLRFQNASDIVIKEIIYVASADYIHVCLFNTNNGTPFISVLELRVLDNDAYFLTSMELLARHDLGLQDGELIRYPDDMYDRIWTPYNSKDWKQINTSLPVDQGSSSSIAASSFSFITFPPFNVMRTAAIPANVSNNMEFHFMQSRDNVSIFYAYLYFAEIQKLQANQIRQFNIFVNGDIFIANASPSYLETSYYLAIQISPWLNIWINETDRSTLPPLFNAIEVYMAKNLSQSQTQQTDVDAIMSIKSFYGIKRNWQGDPCTPQAYSWDGLNCSYDGSGPRRITSLILSSAGLTGNIAPDISNLKSIEYLDLSDNNLVGDVPSFLSQMQFLRVLNLEGNQLSGTVPTELIERSKKGSLNLSFGGNPNLCSPEGSCKSSKPKVAILLVSSLAGAVTLLAVTITFRIFRKRQIVKLSAHSRINNELGLRKQQFTYAEVSRITNNFEKVVGKGAFGTVYHGISSNTQVAVKMLSPSVQGYLQFQAEAKLLAKVHHNRLTALIGYCDDGSNIALIYEYMANGDLAKHLSEKNENILDWKQRLQIAVDAAEGLEYLHTGCKPPIVHRDVKSQNILLNEYFRGKIADFGLSRIFPDDSDTHIFTRIAGTPGYLDPEYNMSNRLTEKSDVYSFGIVLLQIITGQPAIAKTEEKSHIVQWVNLMLPESKIDDIVDPRLEGNFDKDSARKALDTAMACVVPSSLNRPKMSNVVMELRQCLAMETAHGVRSKIDFSFGGISGESSLAR 872
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2073 872 ProSitePatterns Serine/Threonine protein kinases active-site signature. 693 705 IPR008271 GO:0004672|GO:0006468
Prci12g2073 872 Pfam Protein tyrosine and serine/threonine kinase 577 784 IPR001245 GO:0004672|GO:0006468
Prci12g2073 872 FunFam Leucine-rich repeat receptor-like kinase 372 505 - -
Prci12g2073 872 Gene3D Ribonuclease Inhibitor 374 496 IPR032675 -
Prci12g2073 872 SUPERFAMILY Protein kinase-like (PK-like) 560 841 IPR011009 -
Prci12g2073 872 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 649 853 - -
Prci12g2073 872 ProSitePatterns Protein kinases ATP-binding region signature. 581 602 IPR017441 GO:0005524
Prci12g2073 872 CDD STKc_IRAK 581 841 - -
Prci12g2073 872 PANTHER OS07G0107800 PROTEIN-RELATED 29 845 - -
Prci12g2073 872 Gene3D Phosphorylase Kinase; domain 1 557 648 - -
Prci12g2073 872 SUPERFAMILY L domain-like 397 495 - -
Prci12g2073 872 Pfam Malectin-like domain 31 360 IPR024788 -
Prci12g2073 872 ProSiteProfiles Protein kinase domain profile. 575 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2073 872 Gene3D Transferase(Phosphotransferase) domain 1 649 859 - -
Prci12g2073 872 SMART serkin_6 575 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2073 Prci-Chr12 38242591 38248972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2073 5 852 Receptor kinase-like Gene Family AT2G19210 46.520 0.0 764
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci12g2073 Malectin_like 2.5e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2073 - - gmx:100778537 1116.29