Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2072 ATGGCAGGACATGTTCTATTTGCATTGTTTCAACTTGCTTTGACTCTTGCAGTTCTTGTTCAACCCAAAAATCAGTCAGGATTCATCAGTATTGATTGTGGACTCGTGGATAAACTAAACTACACAGATGAAACTACTTCAATCTATTACACATCAGATGCCAACATCATATCCAGTGGAATTAGTCACAGTATATCATCCAAATATAAGACACAGACTCTTAAAAGGCAGTTCTGGAATGTTCGAAGTTTCCCAGAAGGAACTAGGAACTGCTATACCCTTGATGCTTCTCGAGGAAGTAGCAGCAAGAACCTAGTGAGAGCCATGTTCATGTATGGAAACTATGATGGTGAAAACTCTCTTCCCGAATTTGACATCTATCTTGGAGCCAAGTGGTGGGACTCTCTGAGGTTTCAGAATGCATCCGATATAGTGATCAAGGAAATCATTTATGTTGCTTCAGCTGATTATATTCATGTTTGCCTTTTTAACACCAACAATGGCACACCTTTCATATCAGTGCTGGAGCTTAGAGTTCTTGACAATGATGCCTATTTTCTTACCTCTATGGAGCTCTTGGCTCGGCACGATTTAGGGTTGCAGGATGGTGAATTAATCAGGTACCCAGATGACATGTATGATAGAATATGGACACCTTATAACTCAAAAGACTGGAAACAGATAAACACCTCACTCCCTGTAGACCAAGGATCATCATCATCAATAGCAGCATCATCATTCAGTTTCATAACATTTCCACCATTCAACGTCATGAGAACAGCAGCAATTCCGGCAAATGTCAGCAACAACATGGAATTTCACTTCATGCAGTCCAGGGACAATGTCTCCATATTCTATGCATACTTGTACTTTGCTGAAATACAGAAACTCCAAGCAAATCAAATCAGACAGTTTAACATTTTCGTGAATGGAGACATTTTCATTGCTAATGCCAGTCCTTCATACCTCGAAACCAGTTATTATTTAGCTATACAAATTTCACCTTGGCTTAATATTTGGATCAATGAAACGGATAGATCGACTCTTCCTCCTCTTTTCAATGCCATTGAGGTATACATGGCTAAGAATCTCTCACAATCACAAACACAGCAAACAGATGTTGATGCTATCATGAGCATCAAATCATTCTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACAGGCATACTCGTGGGATGGCCTTAATTGCAGCTATGACGGATCTGGCCCACGAAGGATCACATCCTTGATCTTATCCTCTGCCGGATTAACTGGAAACATAGCTCCAGATATATCGAATTTAAAGTCTATTGAGTATTTAAACCTAGAAGGCAATCAGCTATCAGGAACGGTTCCAACAGAACTTATTGAGAGGTCAAAGAAAGGATCACTTAACCTCAGTTTTGGTGGAAATCCAAATCTTTGCTCTCCAGAAGGTTCATGCAAGAGTAGTAAGCCAAAAGTTGCCATTCTATTAGTTTCATCACTAGCAGGTGCCGTTACACTGCTGGCAGTCACAATTACCTTCCGCATCTTCAGAAAAAGACAAATAGTTTCCATATGTCCAGTGAAGCTGAGTGCTCATTCCAGAATAAACAATGAGCTAGGGCTAAGGAAACAACAATTCACATATGCTGAAGTTTCTAGAATTACCAACAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCATCTCAAGTAACACTCAGGTTGCTGTCAAGATGCTCTCTCCTTCAGTTCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTCTTGCTAAAGTGCACCATAATCGGTTGACTGCTCTGATAGGATATTGTGATGATGGCTCCAACATAGCCCTCATCTATGAGTATATGGCTAATGGTGACTTGGCTAAACATTTATCAGAGAAAAATGAGAACATCTTGGATTGGAAACAACGGCTACAAATTGCAGTTGATGCTGCAGAAGGCTTGGAGTACCTGCATACGGGATGTAAGCCACCAATTGTTCACAGAGACGTCAAATCCCAAAACATCTTACTGAATGAATATTTCCGAGGAAAAATAGCTGATTTTGGATTGTCAAGAATCTTTCCTGATGACAGTGATACGCATATATTTACTAGGATAGCTGGCACCCCAGGATATCTTGATCCCGAGTACAATATGTCAAACAGGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGGATTGTTCTGCTTCAGATAATTACAGGACAACCTGCTATAGCCAAGACAGAAGAAAAATCTCACATAGTCCAATGGGTTAATCTCATGCTTCCTGAAAGCAAGATTGATGATATTGTGGATCCAAGATTAGAGGGAAACTTTGATAAAGATTCCGCAAGAAAAGCGTTGGATACTGCCATGGCTTGTGTGGTACCTTCTTCCCTGAATAGGCCAAAAATGAGTAACGTAGTGATGGAATTGAGACAATGTTTAGCTATGGAAACGGCTCATGGAGTTCGTAGTAAAATTGATTTCTCATTTGGTGGAATTAGTGGAGAGAGTTCTCTGGCTAGATAG 2562 0.404 MAGHVLFALFQLALTLAVLVQPKNQSGFISIDCGLVDKLNYTDETTSIYYTSDANIISSGISHSISSKYKTQTLKRQFWNVRSFPEGTRNCYTLDASRGSSSKNLVRAMFMYGNYDGENSLPEFDIYLGAKWWDSLRFQNASDIVIKEIIYVASADYIHVCLFNTNNGTPFISVLELRVLDNDAYFLTSMELLARHDLGLQDGELIRYPDDMYDRIWTPYNSKDWKQINTSLPVDQGSSSSIAASSFSFITFPPFNVMRTAAIPANVSNNMEFHFMQSRDNVSIFYAYLYFAEIQKLQANQIRQFNIFVNGDIFIANASPSYLETSYYLAIQISPWLNIWINETDRSTLPPLFNAIEVYMAKNLSQSQTQQTDVDAIMSIKSFYGIKRNWQGDPCTPQAYSWDGLNCSYDGSGPRRITSLILSSAGLTGNIAPDISNLKSIEYLNLEGNQLSGTVPTELIERSKKGSLNLSFGGNPNLCSPEGSCKSSKPKVAILLVSSLAGAVTLLAVTITFRIFRKRQIVSICPVKLSAHSRINNELGLRKQQFTYAEVSRITNNFEKVVGKGAFGTVYHGISSNTQVAVKMLSPSVQGYLQFQAEAKLLAKVHHNRLTALIGYCDDGSNIALIYEYMANGDLAKHLSEKNENILDWKQRLQIAVDAAEGLEYLHTGCKPPIVHRDVKSQNILLNEYFRGKIADFGLSRIFPDDSDTHIFTRIAGTPGYLDPEYNMSNRLTEKSDVYSFGIVLLQIITGQPAIAKTEEKSHIVQWVNLMLPESKIDDIVDPRLEGNFDKDSARKALDTAMACVVPSSLNRPKMSNVVMELRQCLAMETAHGVRSKIDFSFGGISGESSLAR 853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2072 853 ProSiteProfiles Protein kinase domain profile. 556 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2072 853 Pfam Protein tyrosine and serine/threonine kinase 558 765 IPR001245 GO:0004672|GO:0006468
Prci12g2072 853 SUPERFAMILY L domain-like 384 463 - -
Prci12g2072 853 SUPERFAMILY Protein kinase-like (PK-like) 541 822 IPR011009 -
Prci12g2072 853 ProSitePatterns Protein kinases ATP-binding region signature. 562 583 IPR017441 GO:0005524
Prci12g2072 853 Gene3D Phosphorylase Kinase; domain 1 538 629 - -
Prci12g2072 853 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 630 834 - -
Prci12g2072 853 ProSitePatterns Serine/Threonine protein kinases active-site signature. 674 686 IPR008271 GO:0004672|GO:0006468
Prci12g2072 853 Coils Coil 851 853 - -
Prci12g2072 853 CDD STKc_IRAK 562 822 - -
Prci12g2072 853 Gene3D Ribonuclease Inhibitor 374 481 IPR032675 -
Prci12g2072 853 Pfam Malectin-like domain 31 360 IPR024788 -
Prci12g2072 853 SMART serkin_6 556 826 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2072 853 Gene3D Transferase(Phosphotransferase) domain 1 630 840 - -
Prci12g2072 853 PANTHER OS07G0107800 PROTEIN-RELATED 29 826 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2072 Prci-Chr12 38242590 38248972 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2072 5 833 Receptor kinase-like Gene Family AT2G19210 44.867 0.0 727
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci12g2072 Malectin_like 2.4e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2072 - - gmx:100778537 1069.3
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2072 12 38242590 38248972 Prci13g0767 13 6293376 6300818 CCT
Prci12g2072 12 38242590 38248972 Prci12g2072 12 38242590 38248972 ECH