Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2071 ATGGCAGGACATGTTCTATTTGCATTGTTTCAACTTGCTTTGACTCTTGCAGTTCTTGTTCAACCCAAAAATCAGTCAGGATTCATCAGTATTGATTGTGGACTCGTGGATAAACTAAACTACACAGATGAAACTACTTCAATCTATTACACATCAGATGCCAACATCATATCCAGTGGAATTAGTCACAGTATATCATCCAAATATAAGACACAGACTCTTAAAAGGCAGTTCTGGAATGTTCGAAGTTTCCCAGAAGGAACTAGGAACTGCTATACCCTTGATGCTTCTCGAGGAAGTAGCAGCAAGAACCTAGTGAGAGCCATGTTCATGTATGGAAACTATGATGGTGAAAACTCTCTTCCCGAATTTGACATCTATCTTGGAGCCAAGTGGTGGGACTCTCTGAGGTTTCAGAATGCATCCGATATAGTGATCAAGGAAATCATTTATGTTGCTTCAGCTGATTATATTCATGTTTGCCTTTTTAACACCAACAATGGCACACCTTTCATATCAGTGCTGGAGCTTAGAGTTCTTGACAATGATGCCTATTTTCTTACCTCTATGGAGCTCTTGGCTCGGCACGATTTAGGGTTGCAGGATGGTGAATTAATCAGGTACCCAGATGACATGTATGATAGAATATGGACACCTTATAACTCAAAAGACTGGAAACAGATAAACACCTCACTCCCTGTAGACCAAGGATCATCATCATCAATAGCAGCATCATCATTCAGTTTCATAACATTTCCACCATTCAACGTCATGAGAACAGCAGCAATTCCGGCAAATGTCAGCAACAACATGGAATTTCACTTCATGCAGTCCAGGGACAATGTCTCCATATTCTATGCATACTTGTACTTTGCTGAAATACAGAAACTCCAAGCAAATCAAATCAGACAGTTTAACATTTTCGTGAATGGAGACATTTTCATTGCTAATGCCAGTCCTTCATACCTCGAAACCAGTTATTATTTAGCTATACAAATTTCACCTTGGCTTAATATTTGGATCAATGAAACGGATAGATCGACTCTTCCTCCTCTTTTCAATGCCATTGAGGTATACATGGCTAAGAATCTCTCACAATCACAAACACAGCAAACAGATGTTGATGCTATCATGAGCATCAAATCATTCTATGGGATCAAGAGAAACTGGCAAGGAGACCCTTGTACTCCACAGGCATACTCGTGGGATGGCCTTAATTGCAGCTATGACGGATCTGGCCCACGAAGGATCACATCCTTGATCTTATCCTCTGCCGGATTAACTGGAAACATAGCTCCAGATATATCGAATTTAAAGTCTATTGAGTATTTGGATTTATCAGACAACAATTTAGTTGGGGATGTACCTAGTTTCCTGTCTCAAATGCAGTTCTTGAGGGTTCTAAACCTAGAAGGCAATCAGCTATCAGGAACGGTTCCAACAGAACTTATTGAGAGGTCAAAGAAAGGATCACTTAACCTCAGTTTTGGTGGAAATCCAAATCTTTGCTCTCCAGAAGGTTCATGCAAGAGTAGTAAGCCAAAAGTTGCCATTCTATTAGTTTCATCACTAGCAGGTGCCGTTACACTGCTGGCAGTCACAATTACCTTCCGCATCTTCAGAAAAAGACAAATAGTTTCCATATGTCCAGTGAAGCTGAGTGCTCATTCCAGAATAAACAATGAGCTAGGGCTAAGGAAACAACAATTCACATATGCTGAAGTTTCTAGAATTACCAACAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCATCTCAAGTAACACTCAGGTTGCTGTCAAGATGCTCTCTCCTTCAGTTCAAGGATATCTGCAATTTCAGGCAGAGGCAAAACTTCTTGCTAAAGTGCACCATAATCGGTTGACTGCTCTGATAGGATATTGTGATGATGGCTCCAACATAGCCCTCATCTATGAGTATATGGCTAATGGTGACTTGGCTAAACATTTATCAGAGAAAAATGAGAACATCTTGGATTGGAAACAACGGCTACAAATTGCAGTTGATGCTGCAGAAGGCTTGGAGTACCTGCATACGGGATGTAAGCCACCAATTGTTCACAGAGACGTCAAATCCCAAAACATCTTACTGAATGAATATTTCCGAGGAAAAATAGCTGATTTTGGATTGTCAAGAATCTTTCCTGATGACAGTGATACGCATATATTTACTAGGATAGCTGGCACCCCAGGATATCTTGATCCCGAGTACAATATGTCAAACAGGTTGACTGAGAAAAGTGATGTTTACAGCTTTGGGATTGTTCTGCTTCAGATAATTACAGGACAACCTGCTATAGCCAAGACAGAAGAAAAATCTCACATAGTCCAATGGGTTAATCTCATGCTTCCTGAAAGCAAGATTGATGATATTGTGGATCCAAGATTAGAGGGAAACTTTGATAAAGATTCCGCAAGAAAAGCGTTGGATACTGCCATGGCTTGTGTGGTACCTTCTTCCCTGAATAGGCCAAAAATGAGTAACGTAGTGATGGAATTGAGACAATGTTTAGCTATGGAAACGGCTCATGGAGTTCGTAGTAAAATTGATTTCTCATTTGGTGGAATTAGTGGAGAGAGTTCTCTGGCTAGATAG 2634 0.4039 MAGHVLFALFQLALTLAVLVQPKNQSGFISIDCGLVDKLNYTDETTSIYYTSDANIISSGISHSISSKYKTQTLKRQFWNVRSFPEGTRNCYTLDASRGSSSKNLVRAMFMYGNYDGENSLPEFDIYLGAKWWDSLRFQNASDIVIKEIIYVASADYIHVCLFNTNNGTPFISVLELRVLDNDAYFLTSMELLARHDLGLQDGELIRYPDDMYDRIWTPYNSKDWKQINTSLPVDQGSSSSIAASSFSFITFPPFNVMRTAAIPANVSNNMEFHFMQSRDNVSIFYAYLYFAEIQKLQANQIRQFNIFVNGDIFIANASPSYLETSYYLAIQISPWLNIWINETDRSTLPPLFNAIEVYMAKNLSQSQTQQTDVDAIMSIKSFYGIKRNWQGDPCTPQAYSWDGLNCSYDGSGPRRITSLILSSAGLTGNIAPDISNLKSIEYLDLSDNNLVGDVPSFLSQMQFLRVLNLEGNQLSGTVPTELIERSKKGSLNLSFGGNPNLCSPEGSCKSSKPKVAILLVSSLAGAVTLLAVTITFRIFRKRQIVSICPVKLSAHSRINNELGLRKQQFTYAEVSRITNNFEKVVGKGAFGTVYHGISSNTQVAVKMLSPSVQGYLQFQAEAKLLAKVHHNRLTALIGYCDDGSNIALIYEYMANGDLAKHLSEKNENILDWKQRLQIAVDAAEGLEYLHTGCKPPIVHRDVKSQNILLNEYFRGKIADFGLSRIFPDDSDTHIFTRIAGTPGYLDPEYNMSNRLTEKSDVYSFGIVLLQIITGQPAIAKTEEKSHIVQWVNLMLPESKIDDIVDPRLEGNFDKDSARKALDTAMACVVPSSLNRPKMSNVVMELRQCLAMETAHGVRSKIDFSFGGISGESSLAR 877
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2071 877 FunFam Leucine-rich repeat receptor-like kinase 372 505 - -
Prci12g2071 877 ProSiteProfiles Protein kinase domain profile. 580 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2071 877 Gene3D Phosphorylase Kinase; domain 1 562 653 - -
Prci12g2071 877 CDD STKc_IRAK 586 846 - -
Prci12g2071 877 Gene3D Transferase(Phosphotransferase) domain 1 654 864 - -
Prci12g2071 877 PANTHER OS07G0107800 PROTEIN-RELATED 29 850 - -
Prci12g2071 877 Pfam Protein tyrosine and serine/threonine kinase 582 789 IPR001245 GO:0004672|GO:0006468
Prci12g2071 877 Gene3D Ribonuclease Inhibitor 374 496 IPR032675 -
Prci12g2071 877 SMART serkin_6 580 850 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2071 877 SUPERFAMILY Protein kinase-like (PK-like) 565 846 IPR011009 -
Prci12g2071 877 SUPERFAMILY L domain-like 397 495 - -
Prci12g2071 877 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 654 858 - -
Prci12g2071 877 Pfam Malectin-like domain 31 360 IPR024788 -
Prci12g2071 877 ProSitePatterns Serine/Threonine protein kinases active-site signature. 698 710 IPR008271 GO:0004672|GO:0006468
Prci12g2071 877 ProSitePatterns Protein kinases ATP-binding region signature. 586 607 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2071 Prci-Chr12 38242590 38248972 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2071 5 857 Receptor kinase-like Gene Family AT2G19210 46.021 0.0 759
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci12g2071 Malectin_like 2.5e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2071 - - gmx:100778537 1119.76