Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci12g2069 | ATGAATAGCTTCGCTGAATGTTTAATCTTTCCTTGCGACCAGACTGTTCCCCCCAAAACCATAACTAAATTTTGGAGTCTGCAAAACCTTTCAGTTGTTGTTCTGTTCGCATTGTTTGAACTTTCTTTGCCACTTGCAGTTCTTGTTCATTCCCAGAATCAATCAGGATTCATCAGTATTGATTGTGGACTCGTGGGTGAGCCAAACTACACCGATGAAACCACTTCCATCAATTACACTTCAGATGCCAACTTTATATCCACTGGAATTACCCACAGCATATCATCCAAATATAAGCCAAACACTCTTAAAAGGCAGTTCCGGAATGTTCGAAGCTTCCCAGAAGGAACTAGGAACTGCTATACCCTTAATGCTCCTCAAGGAAGTGGCAGCAAGTACCTAGTGAGAGCCATGTTCATGTATGGTAACTATGATGGTGAAGACTCTCTTCCCAAATTTGACATCTATCTTGGAACTAAGTGGTGGGACTCAGTGATGTTTCAGAATGCATCTGATATATTGATCAAGGAAATCATTTATGCTGCTTCAACAAATTATGTTCATGTTTGCCTTTTTAACACCAACAATGGGACACCTTTCGTATCAGTTTTGGAGCTCAGAGTTCTTCACAGTGATGCCTATCTTGTTAGTTCTCTGGAGCTCTTGGCGCGGTATGATTTAGGGTTGCAGGATGGTGAATTAGTCAGATACCCAGATGACATCTATGATCGAATATGGACTCCTCATAACTCAAAAGACTGGGAACGGATGAATACCTCACTTCCTGTAGGCCAAGGATCATCATCATCAGTACCATCCTACAGCTTCATAACAGTACCACCCTCCACTGTCATGAGAACAGCGGCAACGCCAGCAAATGTCAGGAACGACATGGAATTTCACTTCCTCCCCAGGTACAATGCCTCTACTTACTACACATGCTTATACTTTGCTGAAACTCAGAAACTCCAAGCAAATCAAATCAGAGAATTCAACACTTTCTTGAATGGAGGCCTTATCAATTCTGATCCAGTCAGTCCTCCATACCTTGAGACCGAGTATTATATACAAGCAACAACTGAACCTTGGTTCGATATTTGGATCAATAAAACTGGCAGATCAACACTGCCTCCTATTTTCAATGCCATTGAGATATATATGGTTAAGGATCTCTCTCAATCACAAACACAGCAAACAGATGTTGATGCAATCATGAACATCAAGTCATTTTATGGGATCAAGAGAAATTGGCAAGGAGATCCTTGTACTCCACAGGCATACTTGTGGGACGGTCTTAACTGCAGCTATGATAGATCTGGGCCACCAATGATCACATCCTTGAACTTATCCTCTGGTGGATTAACTGGAAACATAGCTCCAGACATATCCAATTTGAAGTCGATTGAGTATTTGGATTTGTCAAACAATAGTTTAGTCGGAGACGTACCTAGTTTCCTATCTCAACTGCAGTTCTTGAGGGTTCTAGACCTCGAAGGCAATCAGCTATCTGGAACAATTCCAGCAGAACTTTATGAGAGGTCAAAGAATGGATCACTCAAACTCAGTTTTGGTGGAAATCCAAATCTTTGCTCTTCAGAAGATTCATGCAAGAGTAGCAAGGCAAAGGTTGTCATTCCATTAGTATCATCGCTAGCCGGAGTTTTCATACTGCTGACAGTCACAATTGCTTTCTGCATCTTCAGAAGAAAACAAGAAGAGAAGCTGAGTGCTTATTCCAAAATAAATAAGGAACTAAAGCTAAAGAAACAACAGCTAACATATGCTGAAGTTTCTAGCATTACCAACAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCTTCTTAGGTAACACTCAGGTTGCTGTCAAAATGCTTACACCTTCAGCTCAGGGATATCAGCAATTTCAGGCAGAGTACCTTTTGATTTATTCAAGTTGCAGAGCTTATGACTGTGATTCACAGGCAAAACTTTTGGCTACTGTTCACCATAAACGCTTGATTGCTCTGATAGGATATTGTGATGATGGATCCAACATAGCTCTCATCTATGAGTATATGGCTAATAGTGACTTAGCTAAGCATTTATCAGAGAAAAATGAGAACATCTTGGATTGGAAACAACGGTTACAAATTGCAGTGGATGCTGCAGAAGGCTTGGAGTATCTGCATACGGGTTGCAAGCCATCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTGAATGAAAATTTTCGGGGCAAAATAGCTGATTTTGGATTGTCAAAAATCTTTGCCGATGAAGGTGATACACATATATCTACTGTGATAGCTGGCACCCCAGGATACCTTGACCCCGAGTACAGTATGTCAAACAGGCTGAATGAAAAAAGTGATGTTTACAGCTTTGGAATTGTACTGCTTGAAATAATTACAGGACAACCTGCAATAGCCAAGACTGAAGAAAAACCACACATAGTCCAATGGGTTAATCTCATGCTTCCTGAAAGCAAGATTGATGATATTGTGGATTCAAGATTACAGGGAAACTTTGATACTGATTCTGCAGGAAAAGCATTGGATACTGCAATGGCTTGCGTAGTGCCTTCTTCCTTGAATAGGCCTACAATGAGTAACGTAGTGATGGAATTGAGACAATGTTTGGCTATGGAGATCGCTCGTGGAATTCATAGTAAAATTGATTTCTCATTTGGTGGAATTAGTGGGGAGAGTTCTCTGGCTAGATAG | 2748 | 0.4068 | MNSFAECLIFPCDQTVPPKTITKFWSLQNLSVVVLFALFELSLPLAVLVHSQNQSGFISIDCGLVGEPNYTDETTSINYTSDANFISTGITHSISSKYKPNTLKRQFRNVRSFPEGTRNCYTLNAPQGSGSKYLVRAMFMYGNYDGEDSLPKFDIYLGTKWWDSVMFQNASDILIKEIIYAASTNYVHVCLFNTNNGTPFVSVLELRVLHSDAYLVSSLELLARYDLGLQDGELVRYPDDIYDRIWTPHNSKDWERMNTSLPVGQGSSSSVPSYSFITVPPSTVMRTAATPANVRNDMEFHFLPRYNASTYYTCLYFAETQKLQANQIREFNTFLNGGLINSDPVSPPYLETEYYIQATTEPWFDIWINKTGRSTLPPIFNAIEIYMVKDLSQSQTQQTDVDAIMNIKSFYGIKRNWQGDPCTPQAYLWDGLNCSYDRSGPPMITSLNLSSGGLTGNIAPDISNLKSIEYLDLSNNSLVGDVPSFLSQLQFLRVLDLEGNQLSGTIPAELYERSKNGSLKLSFGGNPNLCSSEDSCKSSKAKVVIPLVSSLAGVFILLTVTIAFCIFRRKQEEKLSAYSKINKELKLKKQQLTYAEVSSITNNFEKVVGKGAFGTVYHGFLGNTQVAVKMLTPSAQGYQQFQAEYLLIYSSCRAYDCDSQAKLLATVHHKRLIALIGYCDDGSNIALIYEYMANSDLAKHLSEKNENILDWKQRLQIAVDAAEGLEYLHTGCKPSIVHRDVKSKNILLNENFRGKIADFGLSKIFADEGDTHISTVIAGTPGYLDPEYSMSNRLNEKSDVYSFGIVLLEIITGQPAIAKTEEKPHIVQWVNLMLPESKIDDIVDSRLQGNFDTDSAGKALDTAMACVVPSSLNRPTMSNVVMELRQCLAMEIARGIHSKIDFSFGGISGESSLAR | 915 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci12g2069 | 915 | FunFam | LRR receptor-like serine/threonine-protein kinase IOS1 | 692 | 895 | - | - | |
Prci12g2069 | 915 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 736 | 748 | IPR008271 | GO:0004672|GO:0006468 | |
Prci12g2069 | 915 | Gene3D | Phosphorylase Kinase; domain 1 | 589 | 691 | - | - | |
Prci12g2069 | 915 | Coils | Coil | 568 | 588 | - | - | |
Prci12g2069 | 915 | PANTHER | OS07G0107800 PROTEIN-RELATED | 58 | 888 | - | - | |
Prci12g2069 | 915 | ProSiteProfiles | Protein kinase domain profile. | 602 | 900 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci12g2069 | 915 | Pfam | Malectin-like domain | 60 | 388 | IPR024788 | - | |
Prci12g2069 | 915 | Gene3D | Transferase(Phosphotransferase) domain 1 | 692 | 899 | - | - | |
Prci12g2069 | 915 | SUPERFAMILY | L domain-like | 403 | 512 | - | - | |
Prci12g2069 | 915 | FunFam | Leucine-rich repeat receptor-like kinase | 399 | 532 | - | - | |
Prci12g2069 | 915 | Gene3D | Ribonuclease Inhibitor | 401 | 524 | IPR032675 | - | |
Prci12g2069 | 915 | Pfam | Protein tyrosine and serine/threonine kinase | 604 | 881 | IPR001245 | GO:0004672|GO:0006468 | |
Prci12g2069 | 915 | SMART | serkin_6 | 602 | 888 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Prci12g2069 | 915 | ProSitePatterns | Protein kinases ATP-binding region signature. | 608 | 629 | IPR017441 | GO:0005524 | |
Prci12g2069 | 915 | Pfam | Leucine rich repeat | 444 | 502 | IPR001611 | GO:0005515 | |
Prci12g2069 | 915 | SUPERFAMILY | Protein kinase-like (PK-like) | 589 | 884 | IPR011009 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci12g2069 | Prci-Chr12 | 38223310 | 38228654 | Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci12g2069 | 30 | 913 | Receptor kinase-like Gene Family | AT2G19210 | 46.600 | 0.0 | 782 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-I-1 | Prci12g2069 | Malectin_like | 2.9e-98 | CL0202 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci12g2069 | - | - | gmx:100778537 | 1152.12 |