Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2069 ATGAATAGCTTCGCTGAATGTTTAATCTTTCCTTGCGACCAGACTGTTCCCCCCAAAACCATAACTAAATTTTGGAGTCTGCAAAACCTTTCAGTTGTTGTTCTGTTCGCATTGTTTGAACTTTCTTTGCCACTTGCAGTTCTTGTTCATTCCCAGAATCAATCAGGATTCATCAGTATTGATTGTGGACTCGTGGGTGAGCCAAACTACACCGATGAAACCACTTCCATCAATTACACTTCAGATGCCAACTTTATATCCACTGGAATTACCCACAGCATATCATCCAAATATAAGCCAAACACTCTTAAAAGGCAGTTCCGGAATGTTCGAAGCTTCCCAGAAGGAACTAGGAACTGCTATACCCTTAATGCTCCTCAAGGAAGTGGCAGCAAGTACCTAGTGAGAGCCATGTTCATGTATGGTAACTATGATGGTGAAGACTCTCTTCCCAAATTTGACATCTATCTTGGAACTAAGTGGTGGGACTCAGTGATGTTTCAGAATGCATCTGATATATTGATCAAGGAAATCATTTATGCTGCTTCAACAAATTATGTTCATGTTTGCCTTTTTAACACCAACAATGGGACACCTTTCGTATCAGTTTTGGAGCTCAGAGTTCTTCACAGTGATGCCTATCTTGTTAGTTCTCTGGAGCTCTTGGCGCGGTATGATTTAGGGTTGCAGGATGGTGAATTAGTCAGATACCCAGATGACATCTATGATCGAATATGGACTCCTCATAACTCAAAAGACTGGGAACGGATGAATACCTCACTTCCTGTAGGCCAAGGATCATCATCATCAGTACCATCCTACAGCTTCATAACAGTACCACCCTCCACTGTCATGAGAACAGCGGCAACGCCAGCAAATGTCAGGAACGACATGGAATTTCACTTCCTCCCCAGGTACAATGCCTCTACTTACTACACATGCTTATACTTTGCTGAAACTCAGAAACTCCAAGCAAATCAAATCAGAGAATTCAACACTTTCTTGAATGGAGGCCTTATCAATTCTGATCCAGTCAGTCCTCCATACCTTGAGACCGAGTATTATATACAAGCAACAACTGAACCTTGGTTCGATATTTGGATCAATAAAACTGGCAGATCAACACTGCCTCCTATTTTCAATGCCATTGAGATATATATGGTTAAGGATCTCTCTCAATCACAAACACAGCAAACAGATGTTGATGCAATCATGAACATCAAGTCATTTTATGGGATCAAGAGAAATTGGCAAGGAGATCCTTGTACTCCACAGGCATACTTGTGGGACGGTCTTAACTGCAGCTATGATAGATCTGGGCCACCAATGATCACATCCTTGAACTTATCCTCTGGTGGATTAACTGGAAACATAGCTCCAGACATATCCAATTTGAAGTCGATTGAGTATTTGGATTTGTCAAACAATAGTTTAGTCGGAGACGTACCTAGTTTCCTATCTCAACTGCAGTTCTTGAGGGTTCTAGACCTCGAAGGCAATCAGCTATCTGGAACAATTCCAGCAGAACTTTATGAGAGGTCAAAGAATGGATCACTCAAACTCAGTTTTGGTGGAAATCCAAATCTTTGCTCTTCAGAAGATTCATGCAAGAGTAGCAAGGCAAAGGTTGTCATTCCATTAGTATCATCGCTAGCCGGAGTTTTCATACTGCTGACAGTCACAATTGCTTTCTGCATCTTCAGAAGAAAACAAGAAGAGAAGCTGAGTGCTTATTCCAAAATAAATAAGGAACTAAAGCTAAAGAAACAACAGCTAACATATGCTGAAGTTTCTAGCATTACCAACAACTTTGAAAAGGTTGTGGGAAAAGGAGCATTTGGAACAGTCTACCATGGCTTCTTAGGTAACACTCAGGTTGCTGTCAAAATGCTTACACCTTCAGCTCAGGGATATCAGCAATTTCAGGCAGAGTACCTTTTGATTTATTCAAGTTGCAGAGCTTATGACTGTGATTCACAGGCAAAACTTTTGGCTACTGTTCACCATAAACGCTTGATTGCTCTGATAGGATATTGTGATGATGGATCCAACATAGCTCTCATCTATGAGTATATGGCTAATAGTGACTTAGCTAAGCATTTATCAGAGAAAAATGAGAACATCTTGGATTGGAAACAACGGTTACAAATTGCAGTGGATGCTGCAGAAGGCTTGGAGTATCTGCATACGGGTTGCAAGCCATCAATTGTTCACAGAGATGTTAAATCCAAAAACATCTTACTGAATGAAAATTTTCGGGGCAAAATAGCTGATTTTGGATTGTCAAAAATCTTTGCCGATGAAGGTGATACACATATATCTACTGTGATAGCTGGCACCCCAGGATACCTTGACCCCGAGTACAGTATGTCAAACAGGCTGAATGAAAAAAGTGATGTTTACAGCTTTGGAATTGTACTGCTTGAAATAATTACAGGACAACCTGCAATAGCCAAGACTGAAGAAAAACCACACATAGTCCAATGGGTTAATCTCATGCTTCCTGAAAGCAAGATTGATGATATTGTGGATTCAAGATTACAGGGAAACTTTGATACTGATTCTGCAGGAAAAGCATTGGATACTGCAATGGCTTGCGTAGTGCCTTCTTCCTTGAATAGGCCTACAATGAGTAACGTAGTGATGGAATTGAGACAATGTTTGGCTATGGAGATCGCTCGTGGAATTCATAGTAAAATTGATTTCTCATTTGGTGGAATTAGTGGGGAGAGTTCTCTGGCTAGATAG 2748 0.4068 MNSFAECLIFPCDQTVPPKTITKFWSLQNLSVVVLFALFELSLPLAVLVHSQNQSGFISIDCGLVGEPNYTDETTSINYTSDANFISTGITHSISSKYKPNTLKRQFRNVRSFPEGTRNCYTLNAPQGSGSKYLVRAMFMYGNYDGEDSLPKFDIYLGTKWWDSVMFQNASDILIKEIIYAASTNYVHVCLFNTNNGTPFVSVLELRVLHSDAYLVSSLELLARYDLGLQDGELVRYPDDIYDRIWTPHNSKDWERMNTSLPVGQGSSSSVPSYSFITVPPSTVMRTAATPANVRNDMEFHFLPRYNASTYYTCLYFAETQKLQANQIREFNTFLNGGLINSDPVSPPYLETEYYIQATTEPWFDIWINKTGRSTLPPIFNAIEIYMVKDLSQSQTQQTDVDAIMNIKSFYGIKRNWQGDPCTPQAYLWDGLNCSYDRSGPPMITSLNLSSGGLTGNIAPDISNLKSIEYLDLSNNSLVGDVPSFLSQLQFLRVLDLEGNQLSGTIPAELYERSKNGSLKLSFGGNPNLCSSEDSCKSSKAKVVIPLVSSLAGVFILLTVTIAFCIFRRKQEEKLSAYSKINKELKLKKQQLTYAEVSSITNNFEKVVGKGAFGTVYHGFLGNTQVAVKMLTPSAQGYQQFQAEYLLIYSSCRAYDCDSQAKLLATVHHKRLIALIGYCDDGSNIALIYEYMANSDLAKHLSEKNENILDWKQRLQIAVDAAEGLEYLHTGCKPSIVHRDVKSKNILLNENFRGKIADFGLSKIFADEGDTHISTVIAGTPGYLDPEYSMSNRLNEKSDVYSFGIVLLEIITGQPAIAKTEEKPHIVQWVNLMLPESKIDDIVDSRLQGNFDTDSAGKALDTAMACVVPSSLNRPTMSNVVMELRQCLAMEIARGIHSKIDFSFGGISGESSLAR 915
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2069 915 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 692 895 - -
Prci12g2069 915 ProSitePatterns Serine/Threonine protein kinases active-site signature. 736 748 IPR008271 GO:0004672|GO:0006468
Prci12g2069 915 Gene3D Phosphorylase Kinase; domain 1 589 691 - -
Prci12g2069 915 Coils Coil 568 588 - -
Prci12g2069 915 PANTHER OS07G0107800 PROTEIN-RELATED 58 888 - -
Prci12g2069 915 ProSiteProfiles Protein kinase domain profile. 602 900 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2069 915 Pfam Malectin-like domain 60 388 IPR024788 -
Prci12g2069 915 Gene3D Transferase(Phosphotransferase) domain 1 692 899 - -
Prci12g2069 915 SUPERFAMILY L domain-like 403 512 - -
Prci12g2069 915 FunFam Leucine-rich repeat receptor-like kinase 399 532 - -
Prci12g2069 915 Gene3D Ribonuclease Inhibitor 401 524 IPR032675 -
Prci12g2069 915 Pfam Protein tyrosine and serine/threonine kinase 604 881 IPR001245 GO:0004672|GO:0006468
Prci12g2069 915 SMART serkin_6 602 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2069 915 ProSitePatterns Protein kinases ATP-binding region signature. 608 629 IPR017441 GO:0005524
Prci12g2069 915 Pfam Leucine rich repeat 444 502 IPR001611 GO:0005515
Prci12g2069 915 SUPERFAMILY Protein kinase-like (PK-like) 589 884 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2069 Prci-Chr12 38223310 38228654 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2069 30 913 Receptor kinase-like Gene Family AT2G19210 46.600 0.0 782
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci12g2069 Malectin_like 2.9e-98 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2069 - - gmx:100778537 1152.12