Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2068 ATGGGAATGTCAGAGAGCTTCTCCTCTTCTCTCGTTGGTTGTCTGATTTTTGCAGTTCTGGTTCAATCTAAGGATCAATCAGGATTCATAAGCATTGATTGTGGGATACCAGCAAAATACACCTACACTGAGAAGATAACAGGCATAAATTACATATCAGATGACAAGTTCATAAATTCTGGAGTGAGTAACTCCATAACCAGTGAGCTCAAAAGCATGCGTCTACAGCAACTTTGGAACTTGAGAAGCTTTCCTCAAGGAACAAGAAATTGTTACACAATAAACATCACAAGTGGCTCTAAATATCTGATCAGGGCTAATTTTCTGTATGGGAATTATGATGGCCTGAATGAGTTGCCAAGTTTTGATCTACATCTTGGGCCTAGCTTGTGGGAAACAGTCAAAATAACCAATGCATCTCTGTTAGTAAGCCCTGAGATCATACATGTTCCATCACTAGATTACATGCAAATCTGTCTGGTTGACACAGGCTCTGGAACCCCATTTATCTCTGCTATCGAATTAAGGACTTTGATGAATGATACTTATGTTACTCAGACTGGATCCTTGTCACTTTACTGGAGGTTGAATTTAGGCTCAACCAGCAAAAGAACATACAGGTATGGTTATGATGTTTATGATCGCTACTGGTCATATAATGTCTACAACCCAGGCTGGACGCAAATAAGTGCTTCAATTTCTGCTGATTCCTTGGCTCAAAATCATTACGAACCAGCAGCAATTGTTATGAATGATGCAGCCACACCAGTAAATGAAAGTGCTCCAATGTTAGTGTGGTGGGAGCCAGAAAATGCAACAGAACAATTCCATGTTTACCTGCATTTTGCAGAGCTTCAAGTGTTAGAGAAGAATCAAACAAGATCATTCACCATTACCCTCAATGGCGATCTCTTTTATGCCAATTTTGTACCTAACTACAAAGTCACAACCACTATATTTAGCAAATATGCTACCAGTGGAGAAAAAATTGAGCTTTTCTTTAAGAAGACTGAGCATTCAACCCTCCCTCCCATTCTCAATGCCATTGAAGTTTATACAGTTAAAGAATTTTCGCAATCAGAAACAGAAGAAGGAGATGTTGATGCAATCACAACAATCAAGTCCTTTTATGGGGTGACAAGAAATTGGGAAGGAGATCCATGTGGTCCTGAGGCCTACATTTGGGAAGGTCTAAATTGTACTCATGATGGCCAGAGTTCACCAAGAATCACAGTCCTGAATTTATCTTCAAGTGGATTGACAGGACAGGTAGATCCTTCCATCTCAAAGCTCACCATGTTGGAGATGTTGGATTTATCAAACAATAGCTTAAATGGACCGGTGCCAGATTTTCTGTCTCAACTACAAAACGTGAAGATCTTAAACCTGGAGAAAAACAATTTCACTGGTACAGTTCCCTCTGATCTGATTGAAAAATCAAAGAAAGGTTCCCTGTCACTAAGTGTTGGACAAAATCCATATCTATGTGAATCTCCTCCATGCAACAAGAAGAAAAAGGACAATATTATTGTTCCCGTCGCAGCATCAGTTGTTGGAGTTCTGATCCTTCTGGTAGCTGCAGCAACTATATTATTTACCCTTAAAAGCAGAGAACCAAGAGGAACAATTCCAATTGAGACATCACAGCAAGTTGAAAAAGTTGAAGAACAACAAGATATGACTCTGCAAGTCCCAAATAGACAATATTCATACTCTGATGTCATCAAAATGACCTATAACTTTAGCACAATTCTCGGAAAAGGTGGGTTTGGAACTGTTTATTTGGGCTACATTGATGAAACTCCTGTTGCAGTCAAAATGCTCTCTCCATCTTCAGTTCAAGGTTATCAGCAATTCCAAGCGGAGGTTAAGCTTTTAATGAGAGTTCATCACAGAAATTTGACTTCCCTTGTTGGGTATTGCAATGAAGAAACCAACAAAGGGCTTATATATGAGTACATGGCTAATGGCGACCTACAAGATTACCTTTCAGGAAAAGACAACAAACCAAAGTTCTTGACTTGGGAAGACAGACTTTGTATAGCACTGGATGCAGCATTTGGGTTGGAGTATCTGCATAATGGATGTAAGCCACCTATAATCCACAGAGATGTAAAATCTTCAAACATCTTGCTGAATGAAAACTTCAGAGCAAAAATAGCTGACTTTGGTCTATCTAAAACTATCCCAACTGATGGTGGAACTCACGTGTCAACCGTTGTTGCCGGTACTCCAGGTTATCTAGACCCTGAGTATTATATAACAAATAGATTGACAGAGAAAAGCGATGTTTTTAGTTTTGGAGTAGTTCTTTTCGAGATAATCACAAGTCTACCAGTCATATCAAGAAACCATGAGAGAACTCACATAAGTCAATGGGTTAGCTCCATGGTCGCTAAAGGGGATATAAAGGCCATTGTTGACTCAAAGTTCGGTGGGGACTTTGATAGTAACTCAGTTTGGAGAGCAGTGGAATTGGCAATGACTTGTGTGTCTCCAAACCCCAATAGCAGGCCAAGCATGAGTGAGGCAGTGAATGAGTTGAAGGAATGTTTGGCAACAGAAGTAGCAAGAACCAAACACAATGACGGTGGTCATGCAGGAGATTCAGTTGAATTAGTGTCCCTGAATATGACAAGTTCAGAATTCTCTCCCTTGGCCAGGTAG 2667 0.4001 MGMSESFSSSLVGCLIFAVLVQSKDQSGFISIDCGIPAKYTYTEKITGINYISDDKFINSGVSNSITSELKSMRLQQLWNLRSFPQGTRNCYTINITSGSKYLIRANFLYGNYDGLNELPSFDLHLGPSLWETVKITNASLLVSPEIIHVPSLDYMQICLVDTGSGTPFISAIELRTLMNDTYVTQTGSLSLYWRLNLGSTSKRTYRYGYDVYDRYWSYNVYNPGWTQISASISADSLAQNHYEPAAIVMNDAATPVNESAPMLVWWEPENATEQFHVYLHFAELQVLEKNQTRSFTITLNGDLFYANFVPNYKVTTTIFSKYATSGEKIELFFKKTEHSTLPPILNAIEVYTVKEFSQSETEEGDVDAITTIKSFYGVTRNWEGDPCGPEAYIWEGLNCTHDGQSSPRITVLNLSSSGLTGQVDPSISKLTMLEMLDLSNNSLNGPVPDFLSQLQNVKILNLEKNNFTGTVPSDLIEKSKKGSLSLSVGQNPYLCESPPCNKKKKDNIIVPVAASVVGVLILLVAAATILFTLKSREPRGTIPIETSQQVEKVEEQQDMTLQVPNRQYSYSDVIKMTYNFSTILGKGGFGTVYLGYIDETPVAVKMLSPSSVQGYQQFQAEVKLLMRVHHRNLTSLVGYCNEETNKGLIYEYMANGDLQDYLSGKDNKPKFLTWEDRLCIALDAAFGLEYLHNGCKPPIIHRDVKSSNILLNENFRAKIADFGLSKTIPTDGGTHVSTVVAGTPGYLDPEYYITNRLTEKSDVFSFGVVLFEIITSLPVISRNHERTHISQWVSSMVAKGDIKAIVDSKFGGDFDSNSVWRAVELAMTCVSPNPNSRPSMSEAVNELKECLATEVARTKHNDGGHAGDSVELVSLNMTSSEFSPLAR 888
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2068 888 Gene3D Ribonuclease Inhibitor 368 487 IPR032675 -
Prci12g2068 888 Gene3D Phosphorylase Kinase; domain 1 561 653 - -
Prci12g2068 888 ProSiteProfiles Protein kinase domain profile. 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2068 888 Gene3D Transferase(Phosphotransferase) domain 1 654 869 - -
Prci12g2068 888 CDD STKc_IRAK 585 850 - -
Prci12g2068 888 FunFam LRR receptor-like serine/threonine-protein kinase IOS1 654 861 - -
Prci12g2068 888 ProSitePatterns Serine/Threonine protein kinases active-site signature. 700 712 IPR008271 GO:0004672|GO:0006468
Prci12g2068 888 ProSitePatterns Protein kinases ATP-binding region signature. 585 606 IPR017441 GO:0005524
Prci12g2068 888 FunFam Leucine-rich repeat receptor-like kinase 366 498 - -
Prci12g2068 888 Gene3D - 191 355 - -
Prci12g2068 888 Pfam Malectin-like domain 32 354 IPR024788 -
Prci12g2068 888 SUPERFAMILY L domain-like 374 477 - -
Prci12g2068 888 FunFam Leucine-rich repeat receptor-like protein kinase 550 653 - -
Prci12g2068 888 Pfam Protein tyrosine and serine/threonine kinase 581 848 IPR001245 GO:0004672|GO:0006468
Prci12g2068 888 SMART serkin_6 579 852 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2068 888 PANTHER OS07G0107800 PROTEIN-RELATED 30 852 - -
Prci12g2068 888 SUPERFAMILY Protein kinase-like (PK-like) 559 848 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2068 Prci-Chr12 38201963 38206536 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2068 1 888 Receptor kinase-like Gene Family AT1G51800 48.904 0.0 857
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Prci12g2068 Malectin_like 2.4e-113 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2068 - - gmx:100785345 1136.32