LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci12g2063	ATGACTGGGAAATTGAGATGCAACTGGGCTTGGTGCTCTTTGTTATGGCTTGTCTCTGTATCAATATTTGCGATTCAAGAAGTTGATGGAAAATCCATAGTTCAAGCTGCAGAGAAGAACTCTGTACATCACAAACATGCCAGAAGGAAGTTAGATGATGTTGGTGGCTCTATTGACATTGACTGTGGCCTACTTGATGAACTAGGCTATATTGATGGCAAAACTAAGATACCCTACACTACAGATTCAAAAGTCATTGACACTGGAGAAAACCGGAACTTATCAGTTGAGTTCATTTCTGAAAGTCTTCAAAGAATATTTGAAAATGTAAGCAGCTTTCCTGAGGGTAAGAGGAATTGTTATACTCTAAGACATCCAGAAGGCAGAAATACTGTTTACTTGTTGAGAGCTTCTTTCATGTATGGCAACTACGATGGTCTGAATCATCCGCCCAAGTTTGATCTTTATATTGGAGTTAATTTGTGGGACACTGTGAAGTTTGACAATGCCTCTCATATTGTAATAAAGGAGATTTTACATGTGCCACCAATGGATGTTGTACATGTTTGCTTACTGAACGCCTATGAAGAAACTCCTTTTATATCAGCATTGCAGATGAGGCATCTTCACAATTTCATTTATGCTAACAAGTCTCAAACCTTAGCTTTATATAAACGTCTTGACTTTGGTTCCACAACCAATGAAATAGTAAGGTTTGAAGAGGATACTTATGATAGAATTTGGTATCCTTACAATTTACCTCATTGTCAGTCACTGAGTACTAGAGTGACCATTGATTCCCTGAACAACGCATATCGACTGCCATCAACAGTAATGAGAACTGCTGTAACCCCAACTAATGGACCCAAGCTCTGGTTCTCTTTGAACAAGAAAGAAAATTCCAGCCTTCCTCCCATTCTCAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGCCCAAGAAGATGTTAATGCCATTATTGACATCAAACAAGCGTACACAATTAAGTCATGGCAAGGAGATCCTTGTGCACCAATGTACTATTCCTGGGATGGAGTTAACTGCAGCTACAAAGGATATCATGCGCCTAGAATAATTGAATTAAATCTATCCTCCAGCAACTTGTCAGGAACAATAAGTCAATCATTTTCCATGCTTAAATCCTTAGAATATCTGGATTTATCAAACAATAGTTTATCCGGATCACTGCCTGATTTTTTCATACATTTGCCACACTTGAAGACTTTAAATTTATCAGGAAACATGCTCTCTGGTGAAATTCCTTCACCTCTCATGGAAAGATCAAATAGTGGGTCACTTTTGTTGAGCGTGGATCGAAATCCGGATCTGTGTCTGAAAGCTCCATGCAACAAAGAGGACAAGAGTACTTTTCCACTGCATGCGGTCATAGCCATTCTTTCATCCGTAGTATTTCTAATTGTATTGGGTGTTGTGGTCAGCATTATTTGGAGAAGGAAATTCAGCAAAAAACCAGCAAATCAGCCAGTGATATCACATGAAGAAGTTGTGCTAAAGTCAAACAACACACAATTCACATACTCCCAGATAGTGGATATCACCAATAACTTCGAGAAAATGATTGGAAAAGGAGGATCTGGAACTGTTTACCATGGCTCCTTGTCTGATGACACACAAGTTGCTGTCAAAATGCTCTCTTCTCCAGAAAGCAGTAAGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGAGTTCATCATAGAAACTTAGCTTCCTTCCTTGGATATTGTAACGAAGGTGGACACACTGCAATCATATATGAATTCATGGCTTATGGGAACTTAGAGAAGTGTCTTTCAGGTTCAAAGAAAGAATTATCAAGTTGGAAAAATAGGATTCAGATAGCAGTGGATGCCGCTCAAGGACTCGAGTATTTGCATCATGGCTGCAAACCTCCAATAGTTCACAGAGACATAAAGACATCAAATATTTTGCTGAATGAGAAAATGCAGGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTTCTTTTCAGCTGAAAGCGAAAGTCACATGTCAACCGGAGTCATTGGAACATTCGGATACCTTGACCCAGAGTACTACTCATCATACAGGATTACAGAGAGAAGTGATGTTTACAGTTTTGGCGTTGTGCTTTTGGAGCTTATTACAGGGCAGCGAGCAATAATAAAAGGTCAAGAAAACACTCATATTGTGAATTGGGTTACCCCTTTTGTGAAAAGAGGAGATCTGCAACAAATTGTGGATCCAAGTTTGCAGGGAGATTTTGATTTTGGTTCCATGTGGAAGGCTGTGGAAGCAGCATTAGCTTGTGTGTCTCTAACCGCTATACAAAGACCATCAATGAATTATGTTGTCCCAGAACTAAAAGAGAGCTTAGAAATGGAAGCAGCACGTGAGCAAAAATGGGGTACAAATGAACAAAGGCTGAAATCAACCAGTTCGTTTGACATGCATGTAGTTGATCTTGAAACTGCCTCTGGTCCAGAAGCAAGATAG	2529	0.3946	MTGKLRCNWAWCSLLWLVSVSIFAIQEVDGKSIVQAAEKNSVHHKHARRKLDDVGGSIDIDCGLLDELGYIDGKTKIPYTTDSKVIDTGENRNLSVEFISESLQRIFENVSSFPEGKRNCYTLRHPEGRNTVYLLRASFMYGNYDGLNHPPKFDLYIGVNLWDTVKFDNASHIVIKEILHVPPMDVVHVCLLNAYEETPFISALQMRHLHNFIYANKSQTLALYKRLDFGSTTNEIVRFEEDTYDRIWYPYNLPHCQSLSTRVTIDSLNNAYRLPSTVMRTAVTPTNGPKLWFSLNKKENSSLPPILNAMEIYFEKDSYQEPTAQEDVNAIIDIKQAYTIKSWQGDPCAPMYYSWDGVNCSYKGYHAPRIIELNLSSSNLSGTISQSFSMLKSLEYLDLSNNSLSGSLPDFFIHLPHLKTLNLSGNMLSGEIPSPLMERSNSGSLLLSVDRNPDLCLKAPCNKEDKSTFPLHAVIAILSSVVFLIVLGVVVSIIWRRKFSKKPANQPVISHEEVVLKSNNTQFTYSQIVDITNNFEKMIGKGGSGTVYHGSLSDDTQVAVKMLSSPESSKQFQTEAELLMRVHHRNLASFLGYCNEGGHTAIIYEFMAYGNLEKCLSGSKKELSSWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDIKTSNILLNEKMQAKVADFGFSKFFSAESESHMSTGVIGTFGYLDPEYYSSYRITERSDVYSFGVVLLELITGQRAIIKGQENTHIVNWVTPFVKRGDLQQIVDPSLQGDFDFGSMWKAVEAALACVSLTAIQRPSMNYVVPELKESLEMEAAREQKWGTNEQRLKSTSSFDMHVVDLETASGPEAR	842

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci12g2063	842	FunFam	Leucine-rich repeat receptor-like kinase	326	457	-	-
	Prci12g2063	842	Pfam	Malectin-like domain	60	288	IPR024788	-
	Prci12g2063	842	SMART	serkin_6	533	800	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g2063	842	Pfam	Leucine rich repeat	372	428	IPR001611	GO:0005515
	Prci12g2063	842	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	651	663	IPR008271	GO:0004672\|GO:0006468
	Prci12g2063	842	ProSiteProfiles	Protein kinase domain profile.	533	842	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g2063	842	Gene3D	Ribonuclease Inhibitor	327	445	IPR032675	-
	Prci12g2063	842	Gene3D	Transferase(Phosphotransferase) domain 1	607	827	-	-
	Prci12g2063	842	Gene3D	Phosphorylase Kinase; domain 1	506	606	-	-
	Prci12g2063	842	PANTHER	OS07G0107800 PROTEIN-RELATED	291	803	-	-
	Prci12g2063	842	SUPERFAMILY	L domain-like	351	440	-	-
	Prci12g2063	842	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	607	812	-	-
	Prci12g2063	842	PRINTS	Leucine-rich repeat signature	394	407	-	-
	Prci12g2063	842	PRINTS	Leucine-rich repeat signature	415	428	-	-
	Prci12g2063	842	SUPERFAMILY	Protein kinase-like (PK-like)	517	797	IPR011009	-
	Prci12g2063	842	Pfam	Protein tyrosine and serine/threonine kinase	535	745	IPR001245	GO:0004672\|GO:0006468
	Prci12g2063	842	ProSitePatterns	Protein kinases ATP-binding region signature.	539	561	IPR017441	GO:0005524
	Prci12g2063	842	ProSiteProfiles	Leucine-rich repeat profile.	393	415	IPR001611	GO:0005515
	Prci12g2063	842	CDD	STKc_IRAK	539	801	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci12g2063	Prci-Chr12	38120662	38126491	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci12g2063	50	842	Receptor kinase-like Gene Family	AT2G19210	41.427	0.0	642

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Prci12g2063		PK_Tyr_Ser-Thr	7.7e-47	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci12g2063	-		-	pcin:129288548	1100.12