LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Prci12g2062	ATGACTGGGAAATTGAGATGCAACTGGGCTTGGTGCTCTTTGTTATGGCTTGTCTCTGTATCAATATTTGCGATTCAAGAAGTTGATGGAAAATCCATAGTTCAAGCTGCAGAGAAGAACTCTGTACATCACAAACATGCCAGAAGGAAGTTAGATGATGTTGGTGGCTCTATTGACATTGACTGTGGCCTACTTGATGAACTAGGCTATATTGATGGCAAAACTAAGATACCCTACACTACAGATTCAAAAGTCATTGACACTGGAGAAAACCGGAACTTATCAGTTGAGTTCATTTCTGAAAGTCTTCAAAGAATATTTGAAAATGTAAGCAGCTTTCCTGAGGGTAAGAGGAATTGTTATACTCTAAGACATCCAGAAGGCAGAAATACTGTTTACTTGTTGAGAGCTTCTTTCATGTATGGCAACTACGATGGTCTGAATCATCCGCCCAAGTTTGATCTTTATATTGGAGTTAATTTGTGGGACACTGTGAAGTTTGACAATGCCTCTCATATTGTAATAAAGGAGATTTTACATGTGCCACCAATGGATGTTGTACATGTTTGCTTACTGAACGCCTATGAAGAAACTCCTTTTATATCAGCATTGCAGATGAGGCATCTTCACAATTTCATTTATGCTAACAAGTCTCAAACCTTAGCTTTATATAAACGTCTTGACTTTGGTTCCACAACCAATGAAATAGTAAGGTTTGAAGAGGATACTTATGATAGAATTTGGTATCCTTACAATTTACCTCATTGTCAGTCACTGAGTACTAGAGTGACCATTGATTCCCTGAACAACGCATATCGACTGCCATCAACAGTAATGAGAACTGCTGTAACCCCAACTAATGGTAGTGATCCCCTGGATGTTCAGTTTGACACGCGTGATCCTATTTCAAAGTTTTATGTTTATATGCACTTTGCTGAGATTAAAGAGCTACAGAAAAATGAACGCAGGAAATTCAACATCACATTGAATGGAAAATTGTTGGATGAGTCTATAGACTATGTAATTCTTAATTATTTGGACCCTACCACAATTTATAATCCACAGCCCATCACAGGACCCAAGCTCTGGTTCTCTTTGAACAAGAAAGAAAATTCCAGCCTTCCTCCCATTCTCAATGCAATGGAGATTTACTTTGAGAAAGATTCATATCAGGAACCTACAGCCCAAGAAGATGTTAATGCCATTATTGACATCAAACAAGCGTACACAATTAAGTCATGGCAAGGAGATCCTTGTGCACCAATGTACTATTCCTGGGATGGAGTTAACTGCAGCTACAAAGGATATCATGCGCCTAGAATAATTGAATTAAATCTATCCTCCAGCAACTTGTCAGGAACAATAAGTCAATCATTTTCCATGCTTAAATCCTTAGAATATCTGGATTTATCAAACAATAGTTTATCCGGATCACTGCCTGATTTTTTCATACATTTGCCACACTTGAAGACTTTAAATTTATCAGGAAACATGCTCTCTGGTGAAATTCCTTCACCTCTCATGGAAAGATCAAATAGTGGGTCACTTTTGTTGAGCGTGGATCGAAATCCGGATCTGTGTCTGAAAGCTCCATGCAACAAAGAGGACAAGAGTACTTTTCCACTGCATGCGGTCATAGCCATTCTTTCATCCGTAGTATTTCTAATTGTATTGGGTGTTGTGGTCAGCATTATTTGGAGAAGGAAATTCAGCAAAAAACCAGCAAATCAGCCAGTGATATCACATGAAGAAGTTGTGCTAAAGTCAAACAACACACAATTCACATACTCCCAGATAGTGGATATCACCAATAACTTCGAGAAAATGATTGGAAAAGGAGGATCTGGAACTGTTTACCATGGCTCCTTGTCTGATGACACACAAGTTGCTGTCAAAATGCTCTCTTCTCCAGAAAGCAGTAAGCAGTTTCAGACAGAGGCAGAACTCTTAATGCGAGTTCATCATAGAAACTTAGCTTCCTTCCTTGGATATTGTAACGAAGGTGGACACACTGCAATCATATATGAATTCATGGCTTATGGGAACTTAGAGAAGTGTCTTTCAGGTTCAAAGAAAGAATTATCAAGTTGGAAAAATAGGATTCAGATAGCAGTGGATGCCGCTCAAGGACTCGAGTATTTGCATCATGGCTGCAAACCTCCAATAGTTCACAGAGACATAAAGACATCAAATATTTTGCTGAATGAGAAAATGCAGGCAAAAGTTGCTGATTTTGGGTTCTCAAAGTTCTTTTCAGCTGAAAGCGAAAGTCACATGTCAACCGGAGTCATTGGAACATTCGGATACCTTGACCCAGAGTACTACTCATCATACAGGATTACAGAGAGAAGTGATGTTTACAGTTTTGGCGTTGTGCTTTTGGAGCTTATTACAGGGCAGCGAGCAATAATAAAAGGTCAAGAAAACACTCATATTGTGAATTGGGTTACCCCTTTTGTGAAAAGAGGAGATCTGCAACAAATTGTGGATCCAAGTTTGCAGGGAGATTTTGATTTTGGTTCCATGTGGAAGGCTGTGGAAGCAGCATTAGCTTGTGTGTCTCTAACCGCTATACAAAGACCATCAATGAATTATGTTGTCCCAGAACTAAAAGAGAGCTTAGAAATGGAAGCAGCACGTGAGCAAAAATGGGGTACAAATGAACAAAGGCTGAAATCAACCAGTTCGTTTGACATGCATGTAGTTGATCTTGAAACTGCCTCTGGTCCAGAAGCAAGATAG	2742	0.392	MTGKLRCNWAWCSLLWLVSVSIFAIQEVDGKSIVQAAEKNSVHHKHARRKLDDVGGSIDIDCGLLDELGYIDGKTKIPYTTDSKVIDTGENRNLSVEFISESLQRIFENVSSFPEGKRNCYTLRHPEGRNTVYLLRASFMYGNYDGLNHPPKFDLYIGVNLWDTVKFDNASHIVIKEILHVPPMDVVHVCLLNAYEETPFISALQMRHLHNFIYANKSQTLALYKRLDFGSTTNEIVRFEEDTYDRIWYPYNLPHCQSLSTRVTIDSLNNAYRLPSTVMRTAVTPTNGSDPLDVQFDTRDPISKFYVYMHFAEIKELQKNERRKFNITLNGKLLDESIDYVILNYLDPTTIYNPQPITGPKLWFSLNKKENSSLPPILNAMEIYFEKDSYQEPTAQEDVNAIIDIKQAYTIKSWQGDPCAPMYYSWDGVNCSYKGYHAPRIIELNLSSSNLSGTISQSFSMLKSLEYLDLSNNSLSGSLPDFFIHLPHLKTLNLSGNMLSGEIPSPLMERSNSGSLLLSVDRNPDLCLKAPCNKEDKSTFPLHAVIAILSSVVFLIVLGVVVSIIWRRKFSKKPANQPVISHEEVVLKSNNTQFTYSQIVDITNNFEKMIGKGGSGTVYHGSLSDDTQVAVKMLSSPESSKQFQTEAELLMRVHHRNLASFLGYCNEGGHTAIIYEFMAYGNLEKCLSGSKKELSSWKNRIQIAVDAAQGLEYLHHGCKPPIVHRDIKTSNILLNEKMQAKVADFGFSKFFSAESESHMSTGVIGTFGYLDPEYYSSYRITERSDVYSFGVVLLELITGQRAIIKGQENTHIVNWVTPFVKRGDLQQIVDPSLQGDFDFGSMWKAVEAALACVSLTAIQRPSMNYVVPELKESLEMEAAREQKWGTNEQRLKSTSSFDMHVVDLETASGPEAR	913

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Prci12g2062	913	Gene3D	Ribonuclease Inhibitor	398	516	IPR032675	-
	Prci12g2062	913	SUPERFAMILY	Protein kinase-like (PK-like)	588	868	IPR011009	-
	Prci12g2062	913	Gene3D	Phosphorylase Kinase; domain 1	577	677	-	-
	Prci12g2062	913	ProSiteProfiles	Protein kinase domain profile.	604	913	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g2062	913	SMART	serkin_6	604	871	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Prci12g2062	913	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	722	734	IPR008271	GO:0004672\|GO:0006468
	Prci12g2062	913	Gene3D	Transferase(Phosphotransferase) domain 1	678	898	-	-
	Prci12g2062	913	PANTHER	OS07G0107800 PROTEIN-RELATED	58	874	-	-
	Prci12g2062	913	CDD	STKc_IRAK	610	872	-	-
	Prci12g2062	913	ProSitePatterns	Protein kinases ATP-binding region signature.	610	632	IPR017441	GO:0005524
	Prci12g2062	913	Pfam	Leucine rich repeat	443	499	IPR001611	GO:0005515
	Prci12g2062	913	ProSiteProfiles	Leucine-rich repeat profile.	464	486	IPR001611	GO:0005515
	Prci12g2062	913	FunFam	Leucine-rich repeat receptor-like kinase	397	528	-	-
	Prci12g2062	913	PRINTS	Leucine-rich repeat signature	486	499	-	-
	Prci12g2062	913	PRINTS	Leucine-rich repeat signature	465	478	-	-
	Prci12g2062	913	FunFam	LRR receptor-like serine/threonine-protein kinase IOS1	678	883	-	-
	Prci12g2062	913	Pfam	Malectin-like domain	60	384	IPR024788	-
	Prci12g2062	913	SUPERFAMILY	L domain-like	422	511	-	-
	Prci12g2062	913	Pfam	Protein tyrosine and serine/threonine kinase	606	816	IPR001245	GO:0004672\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Prci12g2062	Prci-Chr12	38120662	38126492	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Prci12g2062	50	913	Receptor kinase-like Gene Family	AT2G19210	45.809	0.0	768

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_LRR-I-1	Prci12g2062		Malectin_like	1.7e-103	CL0202

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Prci12g2062	-		-	pcin:129288548	1831.99