Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2046 ATGAAGTCGAAAGTTCCAACACAAGGAAAATCGGCTGATCAACATTGTTTGTCCAAGTGTGCTGACACATTTAGAAAATATTTAGAAGCGGATTTATTTAAAAACATTGTCAATGAAACTTGGGAGCTGGGATGGACACTATGGTTTCTAGATTTCGCTTCAACCAAGGTGGGTTTGATTGAACGTAGAAGGCGCTTTCTTCGCTTTTTACTGTATTCTCCAGCAGCCGGTTTACCAGACCCACCGGAAACCACAAAAACAAATGCTCTGCTTTTGCGTGTTGTGTTCACTATTTTGTCATCTTTCATCATAGTTTTGAGTTGTACTATTCATCTTTCCTTTTCTGGATCGAGTTTATTGTTTCTTGGTTCCGTTATTTTCTGTGATCCTCTGAGCTCAAATTTGATTCTGCTTAGTCTGGACACTGGATATTCTAGCTTCGTAATTCAAGCTCAAAGAAATGAACTTTGTACGGAACCCCATCTCAAGGTTCTTTACTTTCTTCTCTTTCTGCTTCAGCTTCATTCTCTGTGGTCCTACCCGACCCCAAGGAGCTGTACGGACACGACCCGCGTGTGCACTTCCTTCTTGGCCTTCAAACCTCAACCAAACCAGATGCTTGCAGTTATACAGAGTATGTTCGATGTATTGCCCGGTGATATTACTGTGGAAGGCAATGGCTGGGATTACGTGTTCATCAGGAAGAACTGTTCCTGCGCTTATGGCATAAAGAAATATGTATCCAACACTACGTTCACTGTGAAATCCAATGAAGGGTTTGTGCATGATTTGGTGATGAAGGCCTATGACGGGCTTGCTATCTTGCCCAACACCACCAGGAGGGCCAAAAACGGCGCCGTTATATCACTGAGGTTGTTTTGTGGGTGTTCTACTGGACTGTGGAACTATTTGTTGAGTTATGTCATGAGAGATGGGGATAGTGTTGAATCTTTGGCGAGTCGGTTTGGGGTTAGCATGGATAGTATCGAGACGGTAAATGGTATTGATAATCCGGATAATGTCACCGTCGGATCTCTATATTATATACCTCTGGATTCAGCTCCTGGTGAGCCATATCCTTTGAAGAATGATACTCCTCCAGCACCTGTTCCTGCCCCCTCTGCTGACAATTTTTCAGCTAATCAAGTTGAGAATAAGGCTCATGTACCATATAAATGGATCATTGGTGGTTTAGGAGTTGTTCTTGCTCTTATCATACTGAGCATAATTCTGTGTGTTTCCCTGCGATCATCACATTGTTTCCATGAAGCCAGAAGAAGTCATGCAAAAGATACTGAGCCCAAGACCTTTCATAAGTTTCATATTCTTCAGAATTCAAGTTTTTGTTGCGGTTCAGGAAGGTATATAAGTGAAAAGTCCGTAGACCAGAATCAAACTGATGGCGAACCTAGCAATGTCCAGATTACCATTCCCAAAGTTCCAACTCTAGGGACTGATGTATTTGACATGGACAAGCCTGTGGTTTTCACATATGAAAATATTTTCTCATCAACTGATCGTTTCTCTGATTCAAATCTTCTTGGGCATGGTACATACGGTTCTGTTTACTATGGCATGCTTCGTGACCAGGAAGTAGCTATAAAAAGAATGACGGCTACAAAAACTAGAGAATTTATGTCTGAAATGAAAGTCTTGTGCAAGGTTCATCATGCAAATCTGGTAGAATTGATTGGCTATGCAACTAGCCATGATGAACTTTTCCTGATTTACGAATATGCACTGAAGGGATCACTCAAAAGCCATTTACATGATCCTCAGAATAAGGGTCATTCCCCTCTTTCTTGGATCATGAGGGTCCAGATTGCCCTTGATGCTGCTAGGGGCCTTGAATACATACATGAGCACACCAAAACCCATTACATCCATCGAGATATCAAAACAAGCAACATTTTACTAGATGCTTCCTTCAGGGCAAAGATTTCAGATTTTGGGTTAGCAAAACTTGTTGGGACGGCAAATGAGGGAGAAATTGCTACCACTAGAGTTATTGGTACATATGGATATCTTGCTCCAGAATACTTGAGTGATGGCCTTGCGACAACTAAAAGTGATGTCTATGCATTTGGTGTTGTTCTCTTTGAGATTATATCTGGGAAGGAGGCCATCATTCGAACAGAAGGCACAATGACAAAAAATCCTGAAAGACGTTCATTGGCATCTATTATGCTGGCAGCTCTTAAAAACACATCCGATTCCTTGAGCATGTCAAACATGAGAGATTATATTGATCCTAACATGATGGATCTTTATCCTCATGATTGTGTGTACAAGATGGCAATGCTGGCGAAGCAATGTGTGGACGACGATCCCATTGTACGACCTGATATGAAACAAGTTGTGATTTCCCTCTCACAGATTCTCTTGTCTTCTATTGAGTGGGAAGCAACTCTTGCTGGGAACAGTCAGGTTTTCAGTGGGCTTGTTCAGGGAAGATAG 2457 0.418 MKSKVPTQGKSADQHCLSKCADTFRKYLEADLFKNIVNETWELGWTLWFLDFASTKVGLIERRRRFLRFLLYSPAAGLPDPPETTKTNALLLRVVFTILSSFIIVLSCTIHLSFSGSSLLFLGSVIFCDPLSSNLILLSLDTGYSSFVIQAQRNELCTEPHLKVLYFLLFLLQLHSLWSYPTPRSCTDTTRVCTSFLAFKPQPNQMLAVIQSMFDVLPGDITVEGNGWDYVFIRKNCSCAYGIKKYVSNTTFTVKSNEGFVHDLVMKAYDGLAILPNTTRRAKNGAVISLRLFCGCSTGLWNYLLSYVMRDGDSVESLASRFGVSMDSIETVNGIDNPDNVTVGSLYYIPLDSAPGEPYPLKNDTPPAPVPAPSADNFSANQVENKAHVPYKWIIGGLGVVLALIILSIILCVSLRSSHCFHEARRSHAKDTEPKTFHKFHILQNSSFCCGSGRYISEKSVDQNQTDGEPSNVQITIPKVPTLGTDVFDMDKPVVFTYENIFSSTDRFSDSNLLGHGTYGSVYYGMLRDQEVAIKRMTATKTREFMSEMKVLCKVHHANLVELIGYATSHDELFLIYEYALKGSLKSHLHDPQNKGHSPLSWIMRVQIALDAARGLEYIHEHTKTHYIHRDIKTSNILLDASFRAKISDFGLAKLVGTANEGEIATTRVIGTYGYLAPEYLSDGLATTKSDVYAFGVVLFEIISGKEAIIRTEGTMTKNPERRSLASIMLAALKNTSDSLSMSNMRDYIDPNMMDLYPHDCVYKMAMLAKQCVDDDPIVRPDMKQVVISLSQILLSSIEWEATLAGNSQVFSGLVQGR 818
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2046 818 Gene3D Phosphorylase Kinase; domain 1 482 579 - -
Prci12g2046 818 Pfam Protein tyrosine and serine/threonine kinase 512 788 IPR001245 GO:0004672|GO:0006468
Prci12g2046 818 Gene3D LysM domain 302 357 IPR036779 -
Prci12g2046 818 ProSiteProfiles LysM domain profile. 305 349 IPR018392 -
Prci12g2046 818 SUPERFAMILY LysM domain 306 350 IPR036779 -
Prci12g2046 818 ProSitePatterns Protein kinases ATP-binding region signature. 514 535 IPR017441 GO:0005524
Prci12g2046 818 FunFam PTI1-like tyrosine-protein kinase 3 580 804 - -
Prci12g2046 818 FunFam Kinase family protein 483 579 - -
Prci12g2046 818 SUPERFAMILY Protein kinase-like (PK-like) 487 790 IPR011009 -
Prci12g2046 818 Pfam LysM domain 307 344 IPR018392 -
Prci12g2046 818 ProSitePatterns Serine/Threonine protein kinases active-site signature. 627 639 IPR008271 GO:0004672|GO:0006468
Prci12g2046 818 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 229 812 IPR044812 GO:0019199|GO:0045087
Prci12g2046 818 SMART serkin_6 508 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2046 818 Gene3D Transferase(Phosphotransferase) domain 1 581 804 - -
Prci12g2046 818 ProSiteProfiles Protein kinase domain profile. 508 795 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2046 818 SMART LysM_2 306 350 IPR018392 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2046 Prci-Chr12 37999720 38010676 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2046 183 818 Receptor kinase-like Gene Family AT1G51940 67.391 0.0 834
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Prci12g2046 PK_Tyr_Ser-Thr 2.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2046 - - pcin:129289327 1582