Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2034 ATGCCGGTACTGCGTGGTGGAGTGCGCAGGGGCCGGGCAGCAGCGAAGAAACAGCAGCAGCAGCAAGATAGTCCATTGATCGGGGAAGGGGAAGCAATTGCAACAAGAACAAGAGGGAGGCGGGCGGCGGCGGCGGCGGCAGCAGAGCCTAAGGCCAACAAACAACAGAAGCAGGTGGTGGTCGATGAGAAGGTAGCTGTACCGGTGAAGGAGGGCGAGATCAAGGGCTTGGACGACGGAGTTCGTGTTGGTGAAGCTGCTGCTGGTGGAGCGCAGAGAGAAGAGGTTGGGGAGAAGCAAATGGATGACTACGATAGTGGAGCCAGGAGCAATGATAAGGGTAATGCCGGTGAAGATGAGGGGAGCACCGCTCCGCTTCCTGAGAAGGTTCAAGTTGGTGGATCCCCTGTGTATAAAATAGAGAGAAAATTGGGCAAGGGAGGATTTGGACAAGTGTATGTCGGTCGTCGAATTTCTGGTGTAAATATGAATGAGAGGACTGGACCTGGAGCCGTTGAGGTTGCTCTAAAATTTGAGCATAGGAGTAGTAAAGGATGTAACTATGGACCGCCTTATGAGTGGCAAGTGTACAATACTCTTGGGGGAAGTCATGGTGTACCACGAGTACACTACAAGGGAAAGCAAGGTGACTATTATGTCATGGTTATGGACATGTTGGGACCTAGTTTGTGGGATGTTTGGAATAATAACTCTCACACAATGTCCACTGAAATGGTTGCTTGTATTGCCATTGAAGCAATATCTATATTGGAAAAGATGCACTCTCGAGGGTATGTGCATGGGGATGTGAAGCCTGAAAATTTTCTGCTAGGTCCTCCTGGGACACCTGATGAAAAAAAGCTCTTTCTTGTTGATCTTGGATTAGCTACTAGATGGAGGGATAGTACAACAGGTATGCACGTGGAATATGACCAACGCCCAGATGTTTTTAGGGGCACGGTTCGCTATGCCAGTGTGCATGCACACTTGGGAAGAACTGGCAGCAGGAGGGATGATCTGGAATCACTTGCTTATACATTGATTTTCCTTCTTCGAGGTCGTCTCCCTTGGCAGGGGTATCAGGGAGAAAACAAAGGGTTTCTTGTTTGCAAGAAGAAGATGGGAACTTCTCCGGAGAGTCTATGTTGTTTCTGTCCCCAGCCTTTTAGACAGTTTGTTGAACATGTGGTGAACTTGAAGTTCGATGAAGATCCTAACTATGCAAAGTATATTTCTCTGTTTGATGGCATTGTTGGTCCAAATCCAGATATTAGGCCAATTAATACGGAAGGTGCACAAAAGCTCATTGGTCACAAGAGAGGTCGGTTGGCCATGGAAGAAGAGGATGATGAACAACCTAAAAAGAAGATCCGCATGGGTATGCCAGCAACACAATGGATAAGTGTTTACAATGCTCGGAGACCAATGAAACAAAGATATCATTACAATGTGGCAGATGCAAGGCTGTCCCAGCACATTGAGAAAGGAAATGAAGATGGTTTATATATTAGTAGTGTGGCTTCATGTCAGAACCTGTGGGCTTTGATCATGGATGCGGGAACTGGTTTTTCTTCCCAAGTTTATGAACTCTCTCCCTATTTTCTCCACAAGGAATGGATAATGGATCAGTGGGAAAAAAATTACTATATAAGTGCAATAGCTGGAGCTGCAAATGGGAGTTCGTTAGTAGTGATGTCTAAGGGCACACAATTTGTACAGCAATCCTACAAAGTGAGTGATTCATTTCCATTCAAGTGGATTAACAAAAAATGGAGGGAGGGTTTTTATGTCACGGCAATGGCCACTGCTGGTAGCAGATGGGCAGTAGTTATGTCTCGTGGTGCAGGATTTTCCGATCAGGTGGTTGAACTAGATTTTCTTTATCCCAGTGAAGGGATTCACAAACGATGGGATTACGGATACCGTATCACAGCAACTGCAGCAACTTTTGATCAAGCTGCATTTGTCCTCAGTGTGCCTAGGAGGAAACCTGCGGATGAAACACAGGAAACGCTCAGAACTTCATCTTTTCCTAGTGTACATGTCAAGGAGAAGTGGGCGAAAAACCTCTATATTGCATCTATTTGCTATGGAAGAACAGTTTCTTGA 2109 0.4609 MPVLRGGVRRGRAAAKKQQQQQDSPLIGEGEAIATRTRGRRAAAAAAAEPKANKQQKQVVVDEKVAVPVKEGEIKGLDDGVRVGEAAAGGAQREEVGEKQMDDYDSGARSNDKGNAGEDEGSTAPLPEKVQVGGSPVYKIERKLGKGGFGQVYVGRRISGVNMNERTGPGAVEVALKFEHRSSKGCNYGPPYEWQVYNTLGGSHGVPRVHYKGKQGDYYVMVMDMLGPSLWDVWNNNSHTMSTEMVACIAIEAISILEKMHSRGYVHGDVKPENFLLGPPGTPDEKKLFLVDLGLATRWRDSTTGMHVEYDQRPDVFRGTVRYASVHAHLGRTGSRRDDLESLAYTLIFLLRGRLPWQGYQGENKGFLVCKKKMGTSPESLCCFCPQPFRQFVEHVVNLKFDEDPNYAKYISLFDGIVGPNPDIRPINTEGAQKLIGHKRGRLAMEEEDDEQPKKKIRMGMPATQWISVYNARRPMKQRYHYNVADARLSQHIEKGNEDGLYISSVASCQNLWALIMDAGTGFSSQVYELSPYFLHKEWIMDQWEKNYYISAIAGAANGSSLVVMSKGTQFVQQSYKVSDSFPFKWINKKWREGFYVTAMATAGSRWAVVMSRGAGFSDQVVELDFLYPSEGIHKRWDYGYRITATAATFDQAAFVLSVPRRKPADETQETLRTSSFPSVHVKEKWAKNLYIASICYGRTVS 702
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2034 702 Pfam Protein kinase domain 138 372 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2034 702 ProSiteProfiles Protein kinase domain profile. 138 424 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2034 702 MobiDBLite consensus disorder prediction 1 59 - -
Prci12g2034 702 PANTHER CASEIN KINASE-RELATED 135 664 - -
Prci12g2034 702 MobiDBLite consensus disorder prediction 71 132 - -
Prci12g2034 702 SMART serkin_6 138 436 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g2034 702 ProSitePatterns Protein kinases ATP-binding region signature. 144 177 IPR017441 GO:0005524
Prci12g2034 702 SUPERFAMILY Protein kinase-like (PK-like) 138 418 IPR011009 -
Prci12g2034 702 ProSitePatterns Serine/Threonine protein kinases active-site signature. 265 277 IPR008271 GO:0004672|GO:0006468
Prci12g2034 702 MobiDBLite consensus disorder prediction 95 116 - -
Prci12g2034 702 FunFam casein kinase 1-like protein HD16 111 458 - -
Prci12g2034 702 CDD STKc_CK1 138 414 - -
Prci12g2034 702 Gene3D Transferase(Phosphotransferase) domain 1 104 461 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2034 Prci-Chr12 37894671 37900178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2034 233 414 MAP Kinase Kinase Kinase AT5G50180 26.842 2.73e-09 57.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Prci12g2034 Pkinase 4.7e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2034 - - qsa:O6P43_018208 1188.33
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g2034 12 37894671 37900178 Prci12g2034 12 37894671 37900178 ECH