Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g2026 ATGGCAATGTCCTGCAAGGATGGTAAAATAGGACTGGACAACGGTAAGTATGTCCGTTATACACCTGAGCAGGTTGAAGCCCTTGAGAGGCTTTATCACGAATGCCCCAAACCTACTTCCATTCGTCGCCAGCAGCTTATCCGCGAGTGCCCAATTCTCTCAAACATTGAGCCGAAGCAAATTAAAGTTTGGTTCCAGAACAGAAGATGTAGGGAGAAGCAGAGAAAAGAGGCTTTACGCCTTCAAGCAGTTAATAGGAAGCTGACGGCCTTGAACAAGCTCTTGATGGAGGAGAATGATAGGTTACAGAAGCAGGTGTCTCAATTGGTGTACGAAAATGGCTATTTTCGTCAAAACCCACAAAATACAACACTTGCAACTAAGGACACAAGCTGTGAATCTGCGGTGACGAGTGGTCAACAGAGTTTGACAGCACAGCATCCCCCTAGGGATGCGAGTCCTGCAGGACTTTTGTCCATAGCAGAAGAAACTTTAGCAGAGTTTCTTTCAAAGGCTACTGGAACTGCTGTTGAGTGGGTCCAGATGCCTGGAATGAAGCCTGGTCCGGATTCCATTGGAATCGTTGCTATTTCTCATGGTTGCATTGGTGTGGCAGCGCGAGCCTGTGGTCTAGTGGGCCTTGAGCCCACAAGGGTTGTGGAAATACTCAAAGACCGGCCTTCATGGTTTCGTGATTGCCGAGCTGTTGATGTTCTCAATGTGCTGCCCACAGCTAATGGTGGAACCATAGAGCTGCTTTATATGCAGCTCTATGCGCCAACAACACTGGCGCCTGCTCGTGACTTTTGGTTGTTGCGCTACACATCTGTTTTAGAAGATGGCAGCCTTGTGGTCTGTGAGAGGTCTCTTAAAAATACTCAAAATGGTCCAAGCATGCCACCTGTGCAGCATTTTGTGAGAGCAGAGATGCTTCCTAGTGGGTACTTGATAAGACCTTGTGAAGGTGGTGGTTCTATCATACACATTGTTGACCACATGGATTTGGAGCCATGGAGTGTGCCTGAAGTACTGCGTCCATTGTATGAATCATCAACAGTGATGGCTCAGAAGACAACCATGACGGCCCTACGCCAGCTTAGACAGATATCTCAAGAGGTCTCTCAGTCTAATGTCAATGGGTGGGGCAGACGCCCTGCAGCTTTAAGAGCACTCAGCCAGCGATTGAGCAGGGGTTTCAATGAGGCTCTAAATGGGTTTACTGATGAAGGATGGTCAATGATTGGCAATGATGGTGTAGATGATGTTATGGTTCTGGTGAATACATCTCCTGACAAATTAATGGGTTTAAATCTCTCCTTTGCAAATGGATTTCCATCTGTCAGCAATGCAGTCTTATGTGCCAAAGCATCAATGCTGTTGCAGAATGTGCCTCCTGCCATTCTCCTCAGGTTTTTGAGGGAGCATAGATCTGAATGGGCAGACAACAACATGGATGCTTACTCAGCTGCTGCCATTAAAGTTGGTCCTTGTAGCTTACCAGGATCTCGTGTTGGAAACTATGGAGGTCAAGTTATACTTCCCCTTGCCCACACTATTGAGCATGAAGAGCTTCTGGAAGTCATTAAACTGGATGGAATAGCTCATTCTTCTGAGGACATGATAATGGCAAGAGAGCTGTTTCTTTTGCAACTCTGTGGTGGGATGGATGAGAATTCTTTTGGCACCTGTGCTGAGCTTATATTTGCTCCAATTGATGCATCGTTTGCTGATGATGCCCCACTTTTACCTTCAGGATTTCGCATTATTCCTCTTGATCCTGGGAAGGAAGCCTCTAGCCCAAATCGAACCTTGACCTTGCATCTTCGCTGA 1830 0.4672 MAMSCKDGKIGLDNGKYVRYTPEQVEALERLYHECPKPTSIRRQQLIRECPILSNIEPKQIKVWFQNRRCREKQRKEALRLQAVNRKLTALNKLLMEENDRLQKQVSQLVYENGYFRQNPQNTTLATKDTSCESAVTSGQQSLTAQHPPRDASPAGLLSIAEETLAEFLSKATGTAVEWVQMPGMKPGPDSIGIVAISHGCIGVAARACGLVGLEPTRVVEILKDRPSWFRDCRAVDVLNVLPTANGGTIELLYMQLYAPTTLAPARDFWLLRYTSVLEDGSLVVCERSLKNTQNGPSMPPVQHFVRAEMLPSGYLIRPCEGGGSIIHIVDHMDLEPWSVPEVLRPLYESSTVMAQKTTMTALRQLRQISQEVSQSNVNGWGRRPAALRALSQRLSRGFNEALNGFTDEGWSMIGNDGVDDVMVLVNTSPDKLMGLNLSFANGFPSVSNAVLCAKASMLLQNVPPAILLRFLREHRSEWADNNMDAYSAAAIKVGPCSLPGSRVGNYGGQVILPLAHTIEHEELLEVIKLDGIAHSSEDMIMARELFLLQLCGGMDENSFGTCAELIFAPIDASFADDAPLLPSGFRIIPLDPGKEASSPNRTLTLHLR 609
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g2026 609 CDD bZIP 68 107 - -
Prci12g2026 609 Pfam START domain 160 368 IPR002913 GO:0008289
Prci12g2026 609 SUPERFAMILY Homeodomain-like 14 78 IPR009057 -
Prci12g2026 609 Pfam Homeodomain 16 74 IPR001356 GO:0003677
Prci12g2026 609 SMART HOX_1 13 79 IPR001356 GO:0003677
Prci12g2026 609 SUPERFAMILY Bet v1-like 159 369 - -
Prci12g2026 609 ProSiteProfiles START domain profile. 150 365 IPR002913 GO:0008289
Prci12g2026 609 Gene3D - 196 379 IPR023393 -
Prci12g2026 609 Coils Coil 81 112 - -
Prci12g2026 609 ProSiteProfiles 'Homeobox' domain profile. 11 75 IPR001356 GO:0003677
Prci12g2026 609 CDD START_ArGLABRA2_like 154 369 - -
Prci12g2026 609 FunFam Homeobox-leucine zipper protein REVOLUTA 16 71 - -
Prci12g2026 609 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN ATHB-14 12 607 IPR044830 GO:0003700
Prci12g2026 609 SMART START_1 159 369 IPR002913 GO:0008289
Prci12g2026 609 CDD homeodomain 16 76 IPR001356 GO:0003677
Prci12g2026 609 Gene3D - 12 80 - -
Prci12g2026 609 FunFam homeobox-leucine zipper protein ATHB-15 195 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g2026 Prci-Chr12 37830308 37836042 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g2026 1 606 Homeobox Transcription Factor Family AT1G52150 85.550 0.0 1081
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF HB-HD-ZIP Prci12g2026 START 1.4e-53 CL0209
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g2026 K09338 - cave:132186143 1139.41