Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1997 ATGGGTGGGAACCCTAATTTGTGGAGCAATATGCATGACGCTAATTACGTGCTTGGATCTTCCATTCCTTTCAATTCCCTCCCTCAAAACCCAGAGCCTCCTTCTTCTTGGAGTCAGCTCCTCTTCTCAGGAGCGCCAGGAGAAGAAAAGAGATTGGGTTTTGATCATTTTCAAGCAAAAAAGTTAGGAACGTGGGAAGAACAAGTTCTGGATCCTTGTTTGTCGTCTACAGTTCATCTTGCCGAAGGAATAAAGCAAGAGACAGGTTTCCACAGTAGAAACTTGTACGGCCATGCTGGTGAGGAATTTCAGGGTACTTCTTCTTCATCTGGTGGTGGGTCAGCAGCGATTTGGTCACACATGGTGGTTCCAGTTTCTTCTTCTCCTGGGTCTTGCGTCACTAGCTTGACCAGTAGTAGTAATTATAACAACAATAGCAACAACACTGTATTGGATTCTTTCTCTTATAAGAAGGCTGACACTAATAAGAAAAATCATCTTCTTGCAGATCACTCATCTGAGTGTAGCACAGCCGCTGGTAGGGTCTTCAAGAAAGCTAGGGTTCAAGCATCTTCAAGCCTCCAGCCTCCTCTCAAGGTGAGGAAGGAGAAGCTGGGAGATAGAATATCAGCTCTTCACCAACTAGTTTCTCCATTTGGAAAGACTGACACAGCTTCAGTGTTGTTGGAAGCCATCGGATATATCAGATTCCTTCATGGTCAAATTGAGGCTCTATGTTTTCCTTATTTCGGAAATTCATCAAAAAACTTGAGGAATCATCACTTTGTGAATCATGGAGATAGGAATTCTGTATTCCCTGAGGACCCTGGACAGCTGTTGAACAATGAATCTTCCCTCAAAAGAAATGGAGCTCCAAACCAGGAAAGTGAAGAAGAAAAGGCAAAGGACTTGAGAAGCAGGGGATTGTGCTTGGTGCCTGTGTCTCTGAGCCATCATTTTGGAAGTGATCATAACATCATTGGGGCTGATTTTTGGTCTTCAGCTTATGGCTCTGGTTTTTAA 1023 0.437 MGGNPNLWSNMHDANYVLGSSIPFNSLPQNPEPPSSWSQLLFSGAPGEEKRLGFDHFQAKKLGTWEEQVLDPCLSSTVHLAEGIKQETGFHSRNLYGHAGEEFQGTSSSSGGGSAAIWSHMVVPVSSSPGSCVTSLTSSSNYNNNSNNTVLDSFSYKKADTNKKNHLLADHSSECSTAAGRVFKKARVQASSSLQPPLKVRKEKLGDRISALHQLVSPFGKTDTASVLLEAIGYIRFLHGQIEALCFPYFGNSSKNLRNHHFVNHGDRNSVFPEDPGQLLNNESSLKRNGAPNQESEEEKAKDLRSRGLCLVPVSLSHHFGSDHNIIGADFWSSAYGSGF 340
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1997 340 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 189 238 IPR011598 GO:0046983
Prci12g1997 340 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 199 249 IPR036638 GO:0046983
Prci12g1997 340 PANTHER TRANSCRIPTION FACTOR BHLH83-RELATED 88 318 - -
Prci12g1997 340 MobiDBLite consensus disorder prediction 275 291 - -
Prci12g1997 340 MobiDBLite consensus disorder prediction 268 302 - -
Prci12g1997 340 CDD bHLH_AtbHLH_like 199 245 IPR045239 -
Prci12g1997 340 Gene3D - 199 248 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1997 Prci-Chr12 37602123 37610350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1997 33 279 Basic Helix-Loop-Helix Transcription Factor Gene Family AT4G29100 43.956 5.87e-40 142
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1997 - - gmx:100802121 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1997 12 37602123 37610350 Prci12g1997 12 37602123 37610350 ECH