Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1989 ATGGAGGTTGTCACTGCAGTTGCTAAACATGGGCTTGCGGCCCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAGGCAGCTCATATCTTCTGCACAGGAGATATCAAATATATTATGTGGCAATGACATGAAATCTGGAAATCTTGGGGGGGCTCGAATAGGAATTGTGGCCAAACCCTCTGCTGAGTTTGTTGCTGCAATGCTTGGGACTTGGCTTAGTAAAGGTGTTGCTGTGCCACTTGCGCTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAACAATGCTGATGTGTCTGCAATATTGAGTACTGAAGATCATAGTCAAACAATGCGAAATGTTTCCAATAAAAGCTCTTCTCAATTTTTTGTTATTCCTCCTGTTCCCGACAAACCCTTAGAGAAGAGCAGAGATGAAGATTCACAAAGCACAGAAATGCAAGCAGAAAGAATTCACCAGGGGAATATCACAAGAACAAGTGAAGATCCAGCATTGATACTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGTCGTTCACACACATCGAAGTATCAGTGCACAGGTTCAAACCTTGGCAAAAGCATGGGAGTACACATCCACTGATCAATTTCTGCATTGTCTACCACTCCATCATGTTCATGGACTTTTCAATGCTATGCTGGCCCCACTTTATGCTGGTTCCACGGTTGACTTTATGCCCAAATTTAGTGTGAGTGGAGTTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGGATGTTATAACTGTGTTCACTGGAGTTCCAACTATTTATACCAGATTGATACAAGGTTACCAAGCAATGGACCCTCAGTTGCAAGCTGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGACATCGGCTGTTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCTGGCACTGTTGGCAAGCCTTTTCCTGGGGTACAGGTTAAGATTCTTGCAGATGAGGAGAATGGAAGTAATGAAAATAAAGTGGGTGAGCTTTGCATTAAAAGCCCATCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTTATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACTATGGATGAAGATGGATATTACATCATTTTAGGACGTACCAATGCTGATATAATGAAGGTCGGTGGATACAAGCTGTCTGCATTAGAAATTGAATCAGTTATATTGGAGAATCCGGCTGTCTCAGAATGTTGCGTGTTGGGGTTACCAGACAAAACTTACGGAGAAGTAGTTTGTGCAATTATTGTGCCAGAGGCTGGGACTAAGAAAAAGAGAGAAGAAGAGTCGAAGCCTGCCATGTCTTTAGAAGAATTGTCCTCTTGGGCCAAAGACAGGCTTGCACCTTACAAGATACCCACTCGATTGATCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAGTTGAAGGGATTGCTGGCGTCTGAGCAATAA 1632 0.435 MEVVTAVAKHGLAAHDSVAIRADQKSYSYRQLISSAQEISNILCGNDMKSGNLGGARIGIVAKPSAEFVAAMLGTWLSKGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMRNVSNKSSSQFFVIPPVPDKPLEKSRDEDSQSTEMQAERIHQGNITRTSEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLAKAWEYTSTDQFLHCLPLHHVHGLFNAMLAPLYAGSTVDFMPKFSVSGVWQRWRESYPVEGTKAEDVITVFTGVPTIYTRLIQGYQAMDPQLQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEENGSNENKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTMDEDGYYIILGRTNADIMKVGGYKLSALEIESVILENPAVSECCVLGLPDKTYGEVVCAIIVPEAGTKKKREEESKPAMSLEELSSWAKDRLAPYKIPTRLILWDSLPRNAMGKVNKKELKGLLASEQ 543
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1989 543 MobiDBLite consensus disorder prediction 133 160 - -
Prci12g1989 543 Pfam AMP-binding enzyme 15 434 IPR000873 -
Prci12g1989 543 Pfam AMP-binding enzyme C-terminal domain 444 529 IPR025110 -
Prci12g1989 543 Gene3D - 431 543 IPR045851 -
Prci12g1989 543 CDD MCS 16 536 - -
Prci12g1989 543 ProSitePatterns Putative AMP-binding domain signature. 171 182 IPR020845 -
Prci12g1989 543 FunFam Acyl-CoA synthetase family member 3 9 427 - -
Prci12g1989 543 MobiDBLite consensus disorder prediction 136 151 - -
Prci12g1989 543 PRINTS AMP-binding signature 178 186 IPR020459 -
Prci12g1989 543 PRINTS AMP-binding signature 166 177 IPR020459 -
Prci12g1989 543 PANTHER ACYL-COA SYNTHETASE 21 536 - -
Prci12g1989 543 SUPERFAMILY Acetyl-CoA synthetase-like 8 540 - -
Prci12g1989 543 Gene3D - 6 427 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1989 Prci-Chr12 37563319 37571330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1989 166 541 Monolignol Biosynthesis Gene Families AT4G19010 28.535 1.64e-42 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1989 K18660 - gmx:100813324 878.626