Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1987 ATGGGTGTTTCATTAAAGGCTTTCAGCGAACAATTCAGGCTCCTCCTTTGCCATAAACGCTCTCTTGTTTCAGCTACTTATGCTTCTTTAGCTTCCTCTTCTTCTCTCACTCTCTCGCTGCATCCTGCATACCCCAGGTTTTGTTTCTCGCAGTCTCGGTTGTATTCATCACCTTGTGCAGCCATGGAGGTTGTCACTGCAGTTGCTAAACATGGGCTTGCGGCCCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAGGCAGCTCATATCTTCTGCACAGGAGATATCAAATATATTATGTGGCAATGACATGAAATCTGGAAATCTTGGGGGGGCTCGAATAGGAATTGTGGCCAAACCCTCTGCTGAGTTTGTTGCTGCAATGCTTGGGACTTGGCTTAGTAAAGGTGTTGCTGTGCCACTTGCGCTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAACAATGCTGATGTGTCTGCAATATTGAGTACTGAAGATCATAGTCAAACAATGCGAAATGTTTCCAATAAAAGCTCTTCTCAATTTTTTGTTATTCCTCCTGTTCCCGACAAACCCTTAGAGAAGAGCAGAGATGAAGATTCACAAAGCACAGAAATGCAAGCAGAAAGAATTCACCAGGGGAATATCACAAGAACAAGTGAAGATCCAGCATTGATACTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGTCGTTCACACACATCGAAGTATCAGTGCACAGGTTCAAACCTTGGCAAAAGCATGGGAGTACACATCCACTGATCAATTTCTGCATTGTCTACCACTCCATCATGTTCATGGACTTTTCAATGCTATGCTGGCCCCACTTTATGCTGGTTCCACGGTTGACTTTATGCCCAAATTTAGTGTGAGTGGAGTTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGGATGTTATAACTGTGTTCACTGGAGTTCCAACTATTTATACCAGATTGATACAAGGTTACCAAGCAATGGACCCTCAGTTGCAAGCTGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGACATCGGCTGTTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCTGGCACTGTTGGCAAGCCTTTTCCTGGGGTACAGGTTAAGATTCTTGCAGATGAGGAGAATGGAAGTAATGAAAATAAAGTGGGTGAGCTTTGCATTAAAAGCCCATCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTTATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACTATGGATGAAGATGGATATTACATCATTTTAGGACGTACCAATGCTGATATAATGAAGGTCGGTGGATACAAGCTGTCTGCATTAGAAATTGAATCAGTTATATTGGAGAATCCGGCTGTCTCAGAATGTTGCGTGTTGGGGTTACCAGACAAAACTTACGGAGAAGTAGTTTGTGCAATTATTGTGCCAGAGGCTGGGACTAAGAAAAAGAGAGAAGAAGAGTCGAAGCCTGCCATGTCTTTAGAAGAATTGTCCTCTTGGGCCAAAGACAGGCTTGCACCTTACAAGATACCCACTCGATTGATCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAGTTGAAGGGATTGCTGGCGTCTGAGCAATAA 1815 0.438 MGVSLKAFSEQFRLLLCHKRSLVSATYASLASSSSLTLSLHPAYPRFCFSQSRLYSSPCAAMEVVTAVAKHGLAAHDSVAIRADQKSYSYRQLISSAQEISNILCGNDMKSGNLGGARIGIVAKPSAEFVAAMLGTWLSKGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMRNVSNKSSSQFFVIPPVPDKPLEKSRDEDSQSTEMQAERIHQGNITRTSEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLAKAWEYTSTDQFLHCLPLHHVHGLFNAMLAPLYAGSTVDFMPKFSVSGVWQRWRESYPVEGTKAEDVITVFTGVPTIYTRLIQGYQAMDPQLQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEENGSNENKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTMDEDGYYIILGRTNADIMKVGGYKLSALEIESVILENPAVSECCVLGLPDKTYGEVVCAIIVPEAGTKKKREEESKPAMSLEELSSWAKDRLAPYKIPTRLILWDSLPRNAMGKVNKKELKGLLASEQ 604
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1987 604 FunFam Acyl-CoA synthetase family member 3 70 488 - -
Prci12g1987 604 SUPERFAMILY Acetyl-CoA synthetase-like 65 601 - -
Prci12g1987 604 ProSitePatterns Putative AMP-binding domain signature. 232 243 IPR020845 -
Prci12g1987 604 PANTHER ACYL-COA SYNTHETASE 64 597 - -
Prci12g1987 604 MobiDBLite consensus disorder prediction 194 221 - -
Prci12g1987 604 Gene3D - 66 488 IPR042099 -
Prci12g1987 604 CDD MCS 77 597 - -
Prci12g1987 604 Gene3D - 492 604 IPR045851 -
Prci12g1987 604 MobiDBLite consensus disorder prediction 197 212 - -
Prci12g1987 604 Pfam AMP-binding enzyme 76 495 IPR000873 -
Prci12g1987 604 Pfam AMP-binding enzyme C-terminal domain 505 590 IPR025110 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1987 Prci-Chr12 37563192 37571330 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1987 227 602 Monolignol Biosynthesis Gene Families AT4G19010 28.535 2.46e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1987 K18660 - gmx:100813324 900.968