Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1986 ATGGGTGTTTCATTAAAGGCTTTCAGCGAACAATTCAGGCTCCTCCTTTGCCATAAACGCTCTCTTGTTTCAGCTACTTATGCTTCTTTAGCTTCCTCTTCTTCTCTCACTCTCTCGCTGCATCCTGCATACCCCAGGTTTTGTTTCTCGCAGTCTCGGTTGTATTCATCAGCACCTTGTGCAGCCATGGAGGTTGTCACTGCAGTTGCTAAACATGGGCTTGCGGCCCATGACAGTGTTGCCATTAGAGCAGATCAAAAGAGTTACAGTTACAGGCAGCTCATATCTTCTGCACAGGAGATATCAAATATATTATGTGGCAATGACATGAAATCTGGAAATCTTGGGGGGGCTCGAATAGGAATTGTGGCCAAACCCTCTGCTGAGTTTGTTGCTGCAATGCTTGGGACTTGGCTTAGTAAAGGTGTTGCTGTGCCACTTGCGCTGAGCTATCCAGAAACAGAGCTATTGTATGTGATGAACAATGCTGATGTGTCTGCAATATTGAGTACTGAAGATCATAGTCAAACAATGCGAAATGTTTCCAATAAAAGCTCTTCTCAATTTTTTGTTATTCCTCCTGTTCCCGACAAACCCTTAGAGAAGAGCAGAGATGAAGATTCACAAAGCACAGAAATGCAAGCAGAAAGAATTCACCAGGGGAATATCACAAGAACAAGTGAAGATCCAGCATTGATACTGTACACTAGTGGGACAACAGGTAAACCTAAGGGAGTCGTTCACACACATCGAAGTATCAGTGCACAGGTTCAAACCTTGGCAAAAGCATGGGAGTACACATCCACTGATCAATTTCTGCATTGTCTACCACTCCATCATGTTCATGGACTTTTCAATGCTATGCTGGCCCCACTTTATGCTGGTTCCACGGTTGACTTTATGCCCAAATTTAGTGTGAGTGGAGTTTGGCAGAGATGGCGTGAGTCCTATCCAGTTGAAGGAACTAAGGCTGAGGATGTTATAACTGTGTTCACTGGAGTTCCAACTATTTATACCAGATTGATACAAGGTTACCAAGCAATGGACCCTCAGTTGCAAGCTGCTTCAGCTGCTGCTGCAAGGAACTTGCGTCTTATGATGTGTGGGTCCTCTGCACTTCCTCAACCTGTTATGCAAGAATGGGAAGCCATCACTGGACATCGGCTGTTGGAGCGATATGGCATGACTGAATTTGTCATGGCAATATCAAATCCCTTGAAAGGTGAGCGGAAGGCTGGCACTGTTGGCAAGCCTTTTCCTGGGGTACAGGTTAAGATTCTTGCAGATGAGGAGAATGGAAGTAATGAAAATAAAGTGGGTGAGCTTTGCATTAAAAGCCCATCATTGTTTAAAGAATATTGGAAACTTCCTGAGGTAACAAAGGAATCATTTATTGATGATGGCTTCTTCAAAACTGGAGATGCAGTTACTATGGATGAAGATGGATATTACATCATTTTAGGACGTACCAATGCTGATATAATGAAGGTCGGTGGATACAAGCTGTCTGCATTAGAAATTGAATCAGTTATATTGGAGAATCCGGCTGTCTCAGAATGTTGCGTGTTGGGGTTACCAGACAAAACTTACGGAGAAGTAGTTTGTGCAATTATTGTGCCAGAGGCTGGGACTAAGAAAAAGAGAGAAGAAGAGTCGAAGCCTGCCATGTCTTTAGAAGAATTGTCCTCTTGGGCCAAAGACAGGCTTGCACCTTACAAGATACCCACTCGATTGATCCTTTGGGACTCTCTTCCTCGTAATGCAATGGGGAAGGTCAACAAAAAAGAGTTGAAGGGATTGCTGGCGTCTGAGCAATAA 1818 0.4384 MGVSLKAFSEQFRLLLCHKRSLVSATYASLASSSSLTLSLHPAYPRFCFSQSRLYSSAPCAAMEVVTAVAKHGLAAHDSVAIRADQKSYSYRQLISSAQEISNILCGNDMKSGNLGGARIGIVAKPSAEFVAAMLGTWLSKGVAVPLALSYPETELLYVMNNADVSAILSTEDHSQTMRNVSNKSSSQFFVIPPVPDKPLEKSRDEDSQSTEMQAERIHQGNITRTSEDPALILYTSGTTGKPKGVVHTHRSISAQVQTLAKAWEYTSTDQFLHCLPLHHVHGLFNAMLAPLYAGSTVDFMPKFSVSGVWQRWRESYPVEGTKAEDVITVFTGVPTIYTRLIQGYQAMDPQLQAASAAAARNLRLMMCGSSALPQPVMQEWEAITGHRLLERYGMTEFVMAISNPLKGERKAGTVGKPFPGVQVKILADEENGSNENKVGELCIKSPSLFKEYWKLPEVTKESFIDDGFFKTGDAVTMDEDGYYIILGRTNADIMKVGGYKLSALEIESVILENPAVSECCVLGLPDKTYGEVVCAIIVPEAGTKKKREEESKPAMSLEELSSWAKDRLAPYKIPTRLILWDSLPRNAMGKVNKKELKGLLASEQ 605
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1986 605 SUPERFAMILY Acetyl-CoA synthetase-like 66 602 - -
Prci12g1986 605 ProSitePatterns Putative AMP-binding domain signature. 233 244 IPR020845 -
Prci12g1986 605 MobiDBLite consensus disorder prediction 195 222 - -
Prci12g1986 605 CDD MCS 78 598 - -
Prci12g1986 605 MobiDBLite consensus disorder prediction 198 213 - -
Prci12g1986 605 Pfam AMP-binding enzyme 77 496 IPR000873 -
Prci12g1986 605 Gene3D - 493 605 IPR045851 -
Prci12g1986 605 Pfam AMP-binding enzyme C-terminal domain 506 591 IPR025110 -
Prci12g1986 605 Gene3D - 67 489 IPR042099 -
Prci12g1986 605 PANTHER ACYL-COA SYNTHETASE 65 598 - -
Prci12g1986 605 FunFam Acyl-CoA synthetase family member 3 71 489 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1986 Prci-Chr12 37563192 37571330 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1986 228 603 Monolignol Biosynthesis Gene Families AT4G19010 28.535 2.54e-42 159
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1986 K18660 - gmx:100813324 905.205
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1986 12 37563192 37571330 Prci12g1986 12 37563192 37571330 ECH