Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1967 ATGAAATTAAATCCTACAGCTGCAATAGTCCCCATACCTTTCCCATGGTCGTCTGTCGGGCCACCTTCGCCGTCGCAGCGGTCTCCACCACCGGCAGGGATAATTGCGGGGACAGTGATTGGTTCATTGGTAATATTGGGGTTATTATGTGTGGGTTTGTTTATATGGATAAAGAGGAGAAGGATCAAACTCTCTGGATTGGGCGACCCCTCTCCACAACCACACCAACCTAAAGATGAAGAGGTTGCACTTTCAGTTGCACCACCATCTCCTTCCATTGGCTTGAGATTGGGACCAAAAACATTTACATACGAAGAATTAGCGTTGGCAACAAATGGATTCTCAGACTCAAATTTTCTGGGCGAAGGTGGTTATGGCATTGTCCATAAAGGAGTCCTACCTGATAAAACTAGTGTTGCCGTTAAGCAGCTCAAATCTGGAATCCAACAAGCAGAGCGAGAGTTCCAGACTGAAGTCCAGATCATCAACCAAGTCCATCACAGACATCTTGTTTCCCTTGTTGGCTACTGCATCGACCGAGCACAGAGCAAGATGATGCTTGTTTACGAGCTTGTCCCAAATAAAACCCTAGCGTTCCACCTCCATGAAAAAGGCTTAGCAACTTTAGACTGGAAAAGAAGGATGAAGATTGCCATTGGCGCTGCGAAAGGATTGGCATACCTTCATGAAAAATGTCAACCCAAAATCATACACCGTGACATCAAAGCAGCCAACATTCTTATTGGTGATAATTTTGAGCCAAAGGTTGCAGACTTTGGACTCGCCAGATTATGTTCATTAGAGTCCCAAGTCTTGATGAGTAGAATAATGGGAACTTTCGGATACTTAGCTCCAGAATATGCAGCTAGCGGGAAACTTACTGAGAAGTCAGATGTCTTCTCCTTTGGTGTTGTGCTTTTGGAGTTGATCACAGGACGAAAACCTGTCGGTAATGCTGAGCATTTTCCCAATGGCAGTATGGTTGACTGGGCAGCACCTTTACTCTCCGAAGCTGTGGAAAACAGAAACTTTGAAGTTATTGCTGATCCAAGGTTGCAGAATCATTACGACGTTGAAGAGATGCTTCACATGGTTTCTTGTGCTGCAAACTGCGTGCGCCATTCAGCCACACGTCGTCCTCGAATGAGCCAGGTGGTTCAAGCTTTAGCGGGAGTGATTTTTCTGGATGATTATGATCTGACTGTGGATAGCACACCTAGGCGTCTACTCAGCGAAGACCTGAAGAAGCTGAGGAAGATGGCACTCGGATCATATAGCACCACTGAATCTGATCACTATCAGTCCACTTCCAGTAGTTCTGGCTCCAAACTATATTCAAGTAATGAACATCAAACTTGA 1359 0.4533 MKLNPTAAIVPIPFPWSSVGPPSPSQRSPPPAGIIAGTVIGSLVILGLLCVGLFIWIKRRRIKLSGLGDPSPQPHQPKDEEVALSVAPPSPSIGLRLGPKTFTYEELALATNGFSDSNFLGEGGYGIVHKGVLPDKTSVAVKQLKSGIQQAEREFQTEVQIINQVHHRHLVSLVGYCIDRAQSKMMLVYELVPNKTLAFHLHEKGLATLDWKRRMKIAIGAAKGLAYLHEKCQPKIIHRDIKAANILIGDNFEPKVADFGLARLCSLESQVLMSRIMGTFGYLAPEYAASGKLTEKSDVFSFGVVLLELITGRKPVGNAEHFPNGSMVDWAAPLLSEAVENRNFEVIADPRLQNHYDVEEMLHMVSCAANCVRHSATRRPRMSQVVQALAGVIFLDDYDLTVDSTPRRLLSEDLKKLRKMALGSYSTTESDHYQSTSSSSGSKLYSSNEHQT 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1967 452 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 94 191 - -
Prci12g1967 452 FunFam proline-rich receptor-like protein kinase PERK8 192 403 - -
Prci12g1967 452 Pfam Protein tyrosine and serine/threonine kinase 119 389 IPR001245 GO:0004672|GO:0006468
Prci12g1967 452 CDD STKc_IRAK 120 389 - -
Prci12g1967 452 SUPERFAMILY Protein kinase-like (PK-like) 90 389 IPR011009 -
Prci12g1967 452 Gene3D Transferase(Phosphotransferase) domain 1 192 399 - -
Prci12g1967 452 ProSiteProfiles Protein kinase domain profile. 114 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1967 452 ProSitePatterns Protein kinases ATP-binding region signature. 120 142 IPR017441 GO:0005524
Prci12g1967 452 ProSitePatterns Serine/Threonine protein kinases active-site signature. 236 248 IPR008271 GO:0004672|GO:0006468
Prci12g1967 452 Gene3D Phosphorylase Kinase; domain 1 93 191 - -
Prci12g1967 452 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 45 430 IPR047117 -
Prci12g1967 452 MobiDBLite consensus disorder prediction 424 452 - -
Prci12g1967 452 SMART serkin_6 114 394 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1967 Prci-Chr12 37391243 37401047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1967 6 443 Trihelix Transcription Factor Family AT1G70460 45.418 2.30e-125 378
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci12g1967 PK_Tyr_Ser-Thr 2e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1967 - - pcin:129289322 873.233