Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1964 ATGTCTTCACCGTCTCCGACACCTCAAGACTCCCCATTAGGTGATTTGTCTGGGCCGTCACCGTCACCGTCACCGTCGCTGCTGCTGCCGCCACCCCCACCTTCATTGTTACCATCTCCCCCGCCGTTGCCACCTCCCCTGCCTTCACCGCCACCCCCGCCATCACCGCCACTGTTTCCCCAGTCTTCACTGTCTATACAGTCACCGTCGCCTGAGAATTCAGGGTCGTCGCAACTGATCCTAGGGGTGGTGATTGGTTCGGTCCTGACGTTGGGGCTTTTCGTCATAATGTTTATATGGAGAAAGAGGAGAAGCATGAGATTATTGAGACCCTGTTGGTTGATCAGCAATAACCCTCCACTATCGCACCAACGCTTTGCTGAAGAAGATGCTACGTCTCATTCCATTGCCATAGGACTGACACCAACAAGCACGTTTACATATGAAGAATTAGAAAGGGCTACAGATGGATTCTCGGAGTCAAATTTTTTGGGCCAAGGTGGATTTGGCACAGTCCATAAAGGAGTCCTGCCTAATGATAATCAAAATGTTGCCATTAAGCAGCTCAAGTCTGGAAGCGAACAAGGAGTGCGAGAGTTCCAGACTGAAGTCCAGGTCATCAGCAGAGCTCATCACAGACATCTTGTTTCCCTTGTCGGCTACTGCATTGCTGAATCTCACCGGACTTTGATGCTCGTTTATGAGTTTGTCCCCAATAAAACCCTGGACTTCCACCTGCACGGAAATTGCACTACAGCTATGGACTGGACGACAAGGATGAAGATTGCCATTGGCTCTGCCAAAGGATTGGCATATTTGCATGAAGACTGTCAACCCAAAATCATACATCGGGACATCAAAGCAGCCAACATTCTTCTTGATAATAATTTTGAGCCAAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATTAGACTCTGATACCCAGATCAACTCTACTCGAGTAGTGGGAACCATTGGATATTTGGCGCCAGAATATGCAGCTAGCGGGATTCTCACCGATAAGTCAGATGTCTTCTCCTTCGGAGTCGTGCTTCTGGAGTTGATCACAGGACGAAAACCTGCTCGTAAAACTTTGACAGATGACAATATGGTCGAATGGAGACCATTACTGTCCGAAGCTATGGAAAATAGGAACTTTGAGGGAATAGCTGATGCGAGGTTGCAGAATAATTACAACTTTGCTGAGATGTTTCGAATAGTTTCTTGTGCTGCAAATTGCGTCTGTTCTTCACCTTGTCGTCGTCCTCGAATGAGCCAGGTAGTTCAAGCTTTGGTAGGAAATATTTGTCTGGACGATCCAAAGGAAGAGACCAATCGGAGGAGTCAGAGGAACGGGTCATCACAAGCTGAAGGATATGTATATTGCAACGGCAGTGACGACTCTGATCAATTTCAATCTGCATCGAGCAATTGCTTCAAATCACATTGA 1452 0.4725 MSSPSPTPQDSPLGDLSGPSPSPSPSLLLPPPPPSLLPSPPPLPPPLPSPPPPPSPPLFPQSSLSIQSPSPENSGSSQLILGVVIGSVLTLGLFVIMFIWRKRRSMRLLRPCWLISNNPPLSHQRFAEEDATSHSIAIGLTPTSTFTYEELERATDGFSESNFLGQGGFGTVHKGVLPNDNQNVAIKQLKSGSEQGVREFQTEVQVISRAHHRHLVSLVGYCIAESHRTLMLVYEFVPNKTLDFHLHGNCTTAMDWTTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKAANILLDNNFEPKVADFGLAKFSLDSDTQINSTRVVGTIGYLAPEYAASGILTDKSDVFSFGVVLLELITGRKPARKTLTDDNMVEWRPLLSEAMENRNFEGIADARLQNNYNFAEMFRIVSCAANCVCSSPCRRPRMSQVVQALVGNICLDDPKEETNRRSQRNGSSQAEGYVYCNGSDDSDQFQSASSNCFKSH 483
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1964 483 MobiDBLite consensus disorder prediction 23 60 - -
Prci12g1964 483 MobiDBLite consensus disorder prediction 442 462 - -
Prci12g1964 483 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 131 236 - -
Prci12g1964 483 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 95 455 IPR047117 -
Prci12g1964 483 ProSiteProfiles Protein kinase domain profile. 158 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1964 483 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Prci12g1964 483 CDD STKc_IRAK 164 432 - -
Prci12g1964 483 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Prci12g1964 483 Gene3D Phosphorylase Kinase; domain 1 121 236 - -
Prci12g1964 483 Gene3D Transferase(Phosphotransferase) domain 1 237 455 - -
Prci12g1964 483 SMART serkin_6 158 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1964 483 FunFam proline-rich receptor-like protein kinase PERK8 237 447 - -
Prci12g1964 483 MobiDBLite consensus disorder prediction 1 72 - -
Prci12g1964 483 MobiDBLite consensus disorder prediction 1 22 - -
Prci12g1964 483 Pfam Protein tyrosine and serine/threonine kinase 162 432 IPR001245 GO:0004672|GO:0006468
Prci12g1964 483 SUPERFAMILY Protein kinase-like (PK-like) 136 432 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1964 Prci-Chr12 37342467 37345523 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1964 39 432 Trihelix Transcription Factor Family AT1G70460 47.392 5.63e-123 373
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci12g1964 PK_Tyr_Ser-Thr 2.4e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1964 - - pcin:129289307 637.106