Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1963 ATGTCTCATTCCATTGCCTTAGGACTGACACCAACAAGCACGTTTACATATGAAGAATTAGAAAGGGCTACAGATGGATTCTCGGAGTCAAATTTTCTGGGCCAGGGTGGATTTGGCACTGTCCATAAAGGAGTCCTGCCTAATAACAATCAAAATGTTGCCATTAAGCAACTCAAATCTGGAAGCAAACAAGGAGTGCGAGAATTCCAGACTGAAGTCCAGGTCATCAGCAGAGTCCATCACAGACACCTTGTTTCCCTTGTTGGCTACTGCATTGCTGAATCTCACAAGACTTTGATGCTTGTCTATGAGTTTGTCCCTAATAAAACCCTAGACTTTCACCTCCACGGCGAAAGCACTAGAACTATGGATTGGACCACAAGGATGAAGATTGCTATTGGCTCTGCAAAAGGATTGGCATATTTGCATGAAGACTGTCAACCCAAAATCATACATCGTGACATCAAGGCAGCCAACATTCTTCTCGATAACAATTTTGAGCCAAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATTAGACACTGATACCCAGGTGGACTCTACTCGAGTAGTGGGAACCATTGGATACTTGGCACCAGAATATGCAGCTAATGGGAATCTCACAGATAAGTCAGATGTCTTCTCCTTCGGAGTTGTGCTTCTGGAGTTGATCACAGGACGGAAACCTACTCGTAAAATTTTGGCAGATGACAGTATGGTCGAATGGAGACCTTTACTGTCGGAAGCGATGGAAAATAGGAACTTTGAGGGAATAGCTGATCCGAGGTTGCAGAATAATTACAACTTTGCTGAGATGTTTCGAATAGTTTCTTGTGCTGCAAATTGCGTCCGTTCTTCACCTGGTGGTCGTCCTCGAATGAGCCAGGTAGTTCAAGCTTTGGTAGGAAATATTTGTCTGGACGATCCAAAAGAAGAGACCAATCGGAGGAGTCAGAGGAACGGGACCTCGCAAGCTGAAGGATATATATATAACACCGATAGTGATGACTCTGATCAATTTCAATCTACCTCAAGTAATTCTGGCCCCAAAGCACTTTGA 1062 0.4369 MSHSIALGLTPTSTFTYEELERATDGFSESNFLGQGGFGTVHKGVLPNNNQNVAIKQLKSGSKQGVREFQTEVQVISRVHHRHLVSLVGYCIAESHKTLMLVYEFVPNKTLDFHLHGESTRTMDWTTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKAANILLDNNFEPKVADFGLAKFSLDTDTQVDSTRVVGTIGYLAPEYAANGNLTDKSDVFSFGVVLLELITGRKPTRKILADDSMVEWRPLLSEAMENRNFEGIADPRLQNNYNFAEMFRIVSCAANCVRSSPGGRPRMSQVVQALVGNICLDDPKEETNRRSQRNGTSQAEGYIYNTDSDDSDQFQSTSSNSGPKAL 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1963 353 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 1 105 - -
Prci12g1963 353 FunFam proline-rich receptor-like protein kinase PERK8 106 316 - -
Prci12g1963 353 MobiDBLite consensus disorder prediction 311 353 - -
Prci12g1963 353 Pfam Protein tyrosine and serine/threonine kinase 31 301 IPR001245 GO:0004672|GO:0006468
Prci12g1963 353 ProSiteProfiles Protein kinase domain profile. 27 307 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1963 353 MobiDBLite consensus disorder prediction 319 353 - -
Prci12g1963 353 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 12 326 IPR047117 -
Prci12g1963 353 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Prci12g1963 353 Gene3D Transferase(Phosphotransferase) domain 1 106 325 - -
Prci12g1963 353 SUPERFAMILY Protein kinase-like (PK-like) 8 301 IPR011009 -
Prci12g1963 353 ProSitePatterns Protein kinases ATP-binding region signature. 33 56 IPR017441 GO:0005524
Prci12g1963 353 Gene3D Phosphorylase Kinase; domain 1 12 105 - -
Prci12g1963 353 SMART serkin_6 27 330 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1963 Prci-Chr12 37330123 37332910 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1963 13 325 Trihelix Transcription Factor Family AT5G38560 58.491 1.25e-125 374
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci12g1963 PK_Tyr_Ser-Thr 9.8e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1963 - - pcin:129289307 699.123