Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1948 ATGAACGGAGCTGGGAGACAGGGGCTGAGATCTGCTGCGACGGGAGTGCATCACCAGCGTCAGTACTCCGATAACTTCATGGACAGCTCGTCCAATGGGAGGTGGCTTCAATCGGCTGGTCTCCAACACTTGCAAACCTCCGGAAATCCCATTCCTCCACTTCAGGACTACAACTTCTACGGAGGGGGAGGGCAGGGAAACAGAATGCTAAGGAATGCGCATAAGAGCTTCAATGGAGTGAATGAGTATTATATGGAGCCCTCCACACCTCCGGGCAATTATCAGGCTTCTAGTCAGAAAAAGTATGGTGAAGATTCACCCAGTGATTTCAGCCCTGGGCTGTTGGATCTCCATTCATTTGATACGGAGCTTCTTCCTGAAATGCCAGTATCCAATGTGTATGATGGTACTTCTGCGTATCGGCCTGTCCAGGATAAAAGCTTTGATGACTGTGAACCTTACATTTCTGGCAAACAGACTGGCAGAGCTCGTGTTGCAGAAAACAATCTCCTCAAAAGTTTTTCTGCAGACAAAGAGAAATCCAGTTCTGTGGCAAAAATTAAAGTTGTGGTTCGCAAGAGGCCACTTAACAAGAAGGAAATTGCAAAAAATGAGGAAGACATCATAGAGACAAATTCCAATTGTCTGACAGTACATGAGACTAAACTTAAGGTTGACCTAACTCAGTATGTTGAGAAGCACGAATTTGTATTTGATGCTGTCCTGGATGAAGAGGTCACAAACGATGAGGTTTATAGTGAAACAGTGGAACCCATAGTTCCAATAATCTTTCAACGCACTAAGGCTACTTGCTTTGCATATGGACAGACAGGAAGTGGGAAGACTTATACAATGAAGCCACTACCACTTAAAGCATCAAAGGACATCTTGAGATTGATGCAACATACTTACAAGAACCAGGGATTTCAGTTATTTGTGAGTTTCTTTGAAATATATGGTGGGAAGCTTTTTGATCTCCTTAATGATCGAAAAAAGCTTTGCATGAGGGAGGATGGTAAGCAGCAAGTTTGCATTGTGGGTTTGCAAGAGTACAGAGTTGCCGATGTAGAGACCATCAAGGAATTGATTGAGAAAGGAAATTCCACGAGAAGTACAGGCACTACTGGTGCAAATGAGGAATCTTCACGGTCACATGCAATACTTCAACTAGCTATCAAGAGGTCAGCTGATGGCAATGAATCCAAGCCTCCCCGTCTTGTTGGCAAGCTCTCCTTCATAGATCTTGCTGGAAGTGAACGTGGAGCAGATACTACTGATAATGACAAGCAGACAAGGATAGAAGGCGCTGAAATCAATAAGAGCTTACTTGCCCTGAAAGAATGCATAAGAGCTCTTGATAACGACCAGGGACACATTCCTTTCCGAGGCAGTAAACTAACTGAAGTTTTGAGGGATTCATTTGTCGGTAACTCCCGCACTGTTATGATCTCATGCATATCACCAAGCTCTGGTTGTTGTGAACATACTCTAAATACATTAAGATACGCTGACAGGGTGAAAAGCCTGTCAAAAGGGAACAACACTAAGAAGGATGTTTCATCTACAAATTTTAATCCCAAAGAATCTACTACTGTTCCCTTATCTTCAATTACTGCATCAACTTTTGAGGATCGCACCGCAGATACCTGGCCTGAAGAAGATGATGGAGATGAATTTAGTCCATCTGAAGAGTATTATGATCAGGTGAAACCATCATGGAAAAAAAATGGAAAGATAGAGCCACACGGTACCACAGATGACAAACTGAAGAAGCCCAATGGTCAGACTCAGATAAGACGGAATGACCTCCCAAAAGCTGAACCTAAGGTTGCACATTCAGACGATGATTTGAATGCTCTCTTAAAGGAAGAGGAGGACCTTGTAAATGCTCATCGGAAACAAGTAGAGGAGACTATGAATATTGTTAAAGAGAAAGCTGCTGGCATCCTGCAGTTGCAAACCCGTTTAACTCATTTCCAAAGACGCTTGAAGGAGCATAAAGTTTTGGTTTCATCTGGTGGCTACTAA 2028 0.432 MNGAGRQGLRSAATGVHHQRQYSDNFMDSSSNGRWLQSAGLQHLQTSGNPIPPLQDYNFYGGGGQGNRMLRNAHKSFNGVNEYYMEPSTPPGNYQASSQKKYGEDSPSDFSPGLLDLHSFDTELLPEMPVSNVYDGTSAYRPVQDKSFDDCEPYISGKQTGRARVAENNLLKSFSADKEKSSSVAKIKVVVRKRPLNKKEIAKNEEDIIETNSNCLTVHETKLKVDLTQYVEKHEFVFDAVLDEEVTNDEVYSETVEPIVPIIFQRTKATCFAYGQTGSGKTYTMKPLPLKASKDILRLMQHTYKNQGFQLFVSFFEIYGGKLFDLLNDRKKLCMREDGKQQVCIVGLQEYRVADVETIKELIEKGNSTRSTGTTGANEESSRSHAILQLAIKRSADGNESKPPRLVGKLSFIDLAGSERGADTTDNDKQTRIEGAEINKSLLALKECIRALDNDQGHIPFRGSKLTEVLRDSFVGNSRTVMISCISPSSGCCEHTLNTLRYADRVKSLSKGNNTKKDVSSTNFNPKESTTVPLSSITASTFEDRTADTWPEEDDGDEFSPSEEYYDQVKPSWKKNGKIEPHGTTDDKLKKPNGQTQIRRNDLPKAEPKVAHSDDDLNALLKEEEDLVNAHRKQVEETMNIVKEKAAGILQLQTRLTHFQRRLKEHKVLVSSGGY 675
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1948 675 SMART kinesin_4 184 515 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 PRINTS Kinesin heavy chain signature 459 480 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 PRINTS Kinesin heavy chain signature 375 392 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 PRINTS Kinesin heavy chain signature 409 427 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 PRINTS Kinesin heavy chain signature 266 287 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 MobiDBLite consensus disorder prediction 548 562 - -
Prci12g1948 675 FunFam Kinesin-like protein 166 512 - -
Prci12g1948 675 ProSiteProfiles Kinesin motor domain profile. 186 509 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 Coils Coil 621 641 - -
Prci12g1948 675 Gene3D Kinesin motor domain 163 512 IPR036961 -
Prci12g1948 675 PANTHER KINESIN-RELATED PROTEIN 6 30 551 IPR027640 GO:0003777|GO:0007018
Prci12g1948 675 MobiDBLite consensus disorder prediction 1 29 - -
Prci12g1948 675 MobiDBLite consensus disorder prediction 568 595 - -
Prci12g1948 675 MobiDBLite consensus disorder prediction 513 545 - -
Prci12g1948 675 MobiDBLite consensus disorder prediction 511 596 - -
Prci12g1948 675 Pfam Kinesin motor domain 192 508 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Prci12g1948 675 CDD KISc_KIF2_like 186 507 - -
Prci12g1948 675 MobiDBLite consensus disorder prediction 88 105 - -
Prci12g1948 675 ProSitePatterns Kinesin motor domain signature. 408 419 IPR019821 GO:0003777|GO:0005524|GO:0007018
Prci12g1948 675 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 183 509 IPR027417 -
Prci12g1948 675 MobiDBLite consensus disorder prediction 81 108 - -
Prci12g1948 675 MobiDBLite consensus disorder prediction 14 29 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1948 Prci-Chr12 37179379 37185075 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1948 186 521 Calmodulin-binding Proteins AT5G65930 34.682 2.99e-45 172