Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1945 ATGCTGTGGGGTGAATTTGTGGGAAGCAGTTGGAGTAGAGAATTTGTGGCAGGAGGTGTGGGGGGTATGGCTGGAGTGATCTCTGGTTATCCACTGGACACCCTCCGAATCCACCAACAGAACTCAAACATGCCAACTTCTGTGTTCAGCTTGATCAAAGATGTTGTGTCCAACGAAGGCCTTGCCTCTCTATACAGGGGCATGGCTGCTCCTTTGGCCGCTATTACTTTTCAGAATGCTATGATTTTCCAAACTTATGCAGTTCTCTCAAGAGCTTTTGACTCATCAGTCTCAGAAAATAGCCCTCCTTCCTACAGGAGCGTTGCTCTAGCAGGACTCATAACCGGTGCTTTACAAAGCACAATTGTCTCCCCAGTAGAACTGGTCAAAATTCGCCTCCAGCTTCAGAGAAAAGGCCAATTAAAAGAATCCTGTGAAGGTCCTCTATCAGCCACAAGGAAGATATGGAAAAGAGAAGGTCTTCGAGGAATATTCCGGGGATTCAGCATCACAATTCTCCGGGATGCACCTAGTCATGGTGTATATTTCTGGACATATGAATATATGAGGGAACAACTTCACCCAGGTTGCAGAAAAACTAGTCAAGAAAGCTTGAGCACAATGCTAATAGCAGGAGGATTAGCTGGGGTAGTGAGTTGGATTGGTTCCTACCCTTTGGATGTTATAAAGACAAGACTCCAGGCTCAAACACAATCATCACTGAAATACACAGGAATCCTTGATTGCGTGGGACAGAGTGTCAGAGAAGAAGGGCATAATGTTTTGTGGAGGGGTATAGGAACTACAGTGGGTAGAGCTTTTATAGTGAATGGTGCTGTGTTTGCTGCTTATGAGATTGCTATCAGAAGCCTGTCAAACAGTGGAAGTAGCAGCACTAAAAATCTAGGAGATCCATCCTTTTCTAGAAACTCAAGACAATGA 942 0.449 MLWGEFVGSSWSREFVAGGVGGMAGVISGYPLDTLRIHQQNSNMPTSVFSLIKDVVSNEGLASLYRGMAAPLAAITFQNAMIFQTYAVLSRAFDSSVSENSPPSYRSVALAGLITGALQSTIVSPVELVKIRLQLQRKGQLKESCEGPLSATRKIWKREGLRGIFRGFSITILRDAPSHGVYFWTYEYMREQLHPGCRKTSQESLSTMLIAGGLAGVVSWIGSYPLDVIKTRLQAQTQSSLKYTGILDCVGQSVREEGHNVLWRGIGTTVGRAFIVNGAVFAAYEIAIRSLSNSGSSSTKNLGDPSFSRNSRQ 313
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1945 313 SUPERFAMILY Mitochondrial carrier 10 285 IPR023395 -
Prci12g1945 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 103 192 IPR018108 -
Prci12g1945 313 Pfam Mitochondrial carrier protein 108 193 IPR018108 -
Prci12g1945 313 Pfam Mitochondrial carrier protein 10 93 IPR018108 -
Prci12g1945 313 Pfam Mitochondrial carrier protein 204 293 IPR018108 -
Prci12g1945 313 Gene3D Mitochondrial carrier domain 9 303 IPR023395 -
Prci12g1945 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 9 92 IPR018108 -
Prci12g1945 313 ProSiteProfiles Solute carrier (Solcar) repeat profile. 203 290 IPR018108 -
Prci12g1945 313 MobiDBLite consensus disorder prediction 293 313 - -
Prci12g1945 313 PANTHER MITOCHONDRIAL BASIC AMINO ACIDS TRANSPORTER-RELATED 9 291 - -
Prci12g1945 313 PRINTS Mitochondrial carrier protein signature 167 187 IPR002067 GO:0055085
Prci12g1945 313 PRINTS Mitochondrial carrier protein signature 121 135 IPR002067 GO:0055085
Prci12g1945 313 PRINTS Mitochondrial carrier protein signature 218 236 IPR002067 GO:0055085
Prci12g1945 313 PRINTS Mitochondrial carrier protein signature 108 121 IPR002067 GO:0055085
Prci12g1945 313 PRINTS Mitochondrial carrier protein signature 263 281 IPR002067 GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1945 Prci-Chr12 37161221 37163010 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1945 2 304 Antiporters AT1G79900 61.056 1.36e-129 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1945 K15109 - gmx:100812056 414.461
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci12g1945 12 37161221 37163010 Prci12g1945 12 37161221 37163010 ECH