Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1937 ATGTCTTCACCGTCTCCGACACCTCAAGACTCCCCATTAGGTGATTTGTCTGGGCCGTCACCGTCACCGTCACCGTCGCTGCTGCTGCCGCCACCCCCACCTTCATTGTTACCATCTCCCCCGCCGTTGCCACCTCCCCTGCCTTCACCGCCACCCCCGCCATCACCGCCACTGTTTCCCCAGTCTTCACTGTCTATACAGTCACCGTCGCCTGAGAATTCAGGGTCGTCGCAACTGATCCTAGGGGTGGTGATTGGTTCGGTCCTGACGTTGGGGCTTTTCGTCATAATGTTTATATGGAGAAAGAGGAGAAGCATGAGATTATTGAGACCCTGTTGGTTGATCAGCAATAACCCTCCACTATCGCACCAACGCTTTGCTGAAGAAGATGCTACGTCTCATTCCATTGCCATAGGACTGACACCAACAAGCACGTTTACATATGAAGAATTAGAAAGGGCTACAGATGGATTCTCGGAGTCAAATTTTTTGGGCCAAGGTGGATTTGGCACAGTCCATAAAGGAGTCCTGCCTAATGATAATCAAAATGTTGCCATTAAGCAGCTCAAGTCTGGAAGCGAACAAGGAGTGCGAGAGTTCCAGACTGAAGTCCAGGTCATCAGCAGAGCTCATCACAGACATCTTGTTTCCCTTGTCGGCTACTGCATTGCTGAATCTCACCGGACTTTGATGCTCGTTTATGAGTTTGTCCCCAATAAAACCCTGGACTTCCACCTGCACGGAAATTGCACTACAGCTATGGACTGGACGACAAGGATGAAGATTGCCATTGGCTCTGCCAAAGGATTGGCATATTTGCATGAAGACTGTCAACCCAAAATCATACATCGGGACATCAAAGCAGCCAACATTCTTCTTGATAATAATTTTGAGCCAAAGGTTGCAGATTTTGGACTTGCCAAATTTTCATTAGACTCTGATACCCAGATCAACTCTACTCGAGTAGTGGGAACCATTGGATATTTGGCGCCAGAATATGCAGCTAGCGGGATTCTCACCGATAAGTCAGATGTCTTCTCCTTCGGAGTCGTGCTTCTGGAGTTGATCACAGGACGAAAACCTGCTCGTAAAACTTTGACAGATGACAATATGGTCGAATGGAGACCATTACTGTCCGAAGCTATGGAAAATAGGAACTTTGAGGGAATAGCTGATGCGAGGTTGCAGAATAATTACAACTTTGCTGAGATGTTTCGAATAGTTTCTTGTGCTGCAAATTGCGTCTGTTCTTCACCTTGTCGTCGTCCTCGAATGAGCCAGGTAGTTCAAGCTTTGGTAGGAAATATTTCCATATCTATGATTTCAAACACTTTAAAACCCCACACAAACTCAAGTTTATCTCTTATATGCTACTCTTTGACCAAATCCTCAAAACTTTGTTCCATTTCTAAGGGTTGA 1419 0.4637 MSSPSPTPQDSPLGDLSGPSPSPSPSLLLPPPPPSLLPSPPPLPPPLPSPPPPPSPPLFPQSSLSIQSPSPENSGSSQLILGVVIGSVLTLGLFVIMFIWRKRRSMRLLRPCWLISNNPPLSHQRFAEEDATSHSIAIGLTPTSTFTYEELERATDGFSESNFLGQGGFGTVHKGVLPNDNQNVAIKQLKSGSEQGVREFQTEVQVISRAHHRHLVSLVGYCIAESHRTLMLVYEFVPNKTLDFHLHGNCTTAMDWTTRMKIAIGSAKGLAYLHEDCQPKIIHRDIKAANILLDNNFEPKVADFGLAKFSLDSDTQINSTRVVGTIGYLAPEYAASGILTDKSDVFSFGVVLLELITGRKPARKTLTDDNMVEWRPLLSEAMENRNFEGIADARLQNNYNFAEMFRIVSCAANCVCSSPCRRPRMSQVVQALVGNISISMISNTLKPHTNSSLSLICYSLTKSSKLCSISKG 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1937 472 MobiDBLite consensus disorder prediction 23 60 - -
Prci12g1937 472 FunFam proline-rich receptor-like protein kinase PERK8 237 447 - -
Prci12g1937 472 ProSiteProfiles Protein kinase domain profile. 158 438 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1937 472 ProSitePatterns Serine/Threonine protein kinases active-site signature. 281 293 IPR008271 GO:0004672|GO:0006468
Prci12g1937 472 CDD STKc_IRAK 164 432 - -
Prci12g1937 472 ProSitePatterns Protein kinases ATP-binding region signature. 164 187 IPR017441 GO:0005524
Prci12g1937 472 Gene3D Phosphorylase Kinase; domain 1 121 236 - -
Prci12g1937 472 SMART serkin_6 158 433 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1937 472 Pfam Protein tyrosine and serine/threonine kinase 162 432 IPR001245 GO:0004672|GO:0006468
Prci12g1937 472 PANTHER PROLINE-RICH RECEPTOR-LIKE PROTEIN KINASE PERK4 95 445 IPR047117 -
Prci12g1937 472 MobiDBLite consensus disorder prediction 1 72 - -
Prci12g1937 472 MobiDBLite consensus disorder prediction 1 22 - -
Prci12g1937 472 FunFam Adenine nucleotide alpha hydrolase-like domain kinase 131 236 - -
Prci12g1937 472 Gene3D Transferase(Phosphotransferase) domain 1 237 444 - -
Prci12g1937 472 SUPERFAMILY Protein kinase-like (PK-like) 136 432 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1937 Prci-Chr12 37029936 37037844 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1937 39 459 Trihelix Transcription Factor Family AT1G70460 45.940 2.57e-124 376
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_PERK-1 Prci12g1937 PK_Tyr_Ser-Thr 2.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1937 - - pcin:129289307 567.77