Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1935 ATGGCTCTCGGACTTGAAATCACAGAGCTCAGGTTGGGTCTTCCCGGCGGAGATCAGCCTGGTGCGGGGGGTAAGAGTGCTACTGAGACGACCAAGAAGCGGGTGTTCTCGGAGATTGGTGCCAGCAGCGGTGGCGGCCAGGATAATGAAAATAGCTGCTCTGGTGGTGGTGACTCGAAAACACCGGCGAAGATCGAGGTGGTGGGGTGGCCGCCGGTAGGGTCGTACAGGAGGAGAAACAGCATGAGTGATCAGCAGCAGGGTTCGAAAATTTACGTGAAGGTTAGTATGGATGGAGCTCCTTTCTTGCGTAAAGTTGATTTGGGTTTGCAAAAAGGCTACTCCGAGTTAGCAACCGCGTTGGAGAAGCTCTTCGATTGCCATGGAATCAGAGAGGCATTGAAGGGTGTGGACAGTTCTGAACACGTTCCCATTTATGAGGACAGTGATGGTGACTGGATGCTTGTTGGAGATGTTCCTTGGCAAATGTTTATAGAGTCATGCAAGAGGCTGAGGATCATGAAGAGGTCGGAGACAAAAGGCTTTGATCTGCAGCCAAAAGGTGAAAAGGGTCTATGA 579 0.5147 MALGLEITELRLGLPGGDQPGAGGKSATETTKKRVFSEIGASSGGGQDNENSCSGGGDSKTPAKIEVVGWPPVGSYRRRNSMSDQQQGSKIYVKVSMDGAPFLRKVDLGLQKGYSELATALEKLFDCHGIREALKGVDSSEHVPIYEDSDGDWMLVGDVPWQMFIESCKRLRIMKRSETKGFDLQPKGEKGL 192
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1935 192 MobiDBLite consensus disorder prediction 10 64 - -
Prci12g1935 192 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 4 179 IPR003311 GO:0005634|GO:0006355
Prci12g1935 192 Gene3D - 84 186 - -
Prci12g1935 192 ProSiteProfiles PB1 domain profile. 90 178 IPR000270 GO:0005515
Prci12g1935 192 MobiDBLite consensus disorder prediction 33 58 - -
Prci12g1935 192 FunFam Auxin-responsive protein 85 186 - -
Prci12g1935 192 Pfam AUX/IAA family 28 181 IPR033389 -
Prci12g1935 192 SUPERFAMILY CAD & PB1 domains 80 175 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1935 Prci-Chr12 36953081 36955962 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1935 83 180 B3 DNA Binding Superfamily AT4G23980 41.837 7.96e-14 67.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Prci12g1935 AUX_IAA 1.6e-46 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1935 K14484 - gmx:547784 229.18