Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1928 ATGGATGACACTGAGGATGATGCAAAGTATGCCCCTACCCCATATGATGTAAGTCATCACCAAGGTTATGGTTATTTGAATGGTCAGAAACTTCCAGTTGGGAGCTCTCGACATTCGCTGCCAGTTAGAAGTGAATATGCTGAAGATGATAATGATTATGAGGAAGAAGATGACGGAGAACAGTTAGGACAGGAAGAAGATGATGATGATGGTGATGGTGATGATGAAGACAATGATCAAGGTAATGGTATTCATGTTCCCCAGAAAGATGAGAATGGAGATGGGGATGATAGTGACGATGACTCTGATGACGATGATGATGATGATGATGATAAGCAGAAAAGTTACACCATAAGGATTGAAGATGATTTAGAATCTCACCCAAAAAAGAGAAAGCTGAAGAGTTTGATTTCAACTTATGAATTTGCACCCCGTGTGCCTGCACCTGCAGTTGCAGCTCCTTCAGCTCCTAAACCAGCGTTTGGTGGTAGAAATGCCCTTACTGACTGGACTGAGCATGAGACATTTGTTCTTCTTGATGCTTGGGGTGACCGGTTTATTCAACGTGGAAAAAAAAGTCTTCGGTCTGAGGAATGGCAAGAAGTTGCAGAAAGGGTAAAAGAAGTTTCAAAAACTGAAAGGACAGATACGCAGTGTAGGAATAGACTCGATACATTAAAGAAAAAGTACAAAAAGGAGAAGGCCAAATTAGTAGAAATGGGTGGTGGAACCTGCAAATGGGTTTATTTTAGTAGGATGGATAAGCTGTTGTCCTCTCCTCAACAACAAGCTGGTCTATCTTGTGGTTTGGACTCAGGAGAGTATGTTTTCTCGAACCCTAGAGTTTACTTGAACCGTGCAAATGTGTTTGATGAAATGAGGGATAGTCCAGGGAATTCAGAGTCTACTGGTGAAGAAGATTCGGTTGGGCTCCACCCAAAGAAAAAAAGTTCTAGAAAGAACAATGATGAGACTTCTTCCTTCAAATTACTTGCTGATTCCATTCAGAAATTCGGTGAGATATATGAGAAAATTGAAAACAACAAAAGGCAACAGATGGTGGAACTAGAAAAGATGAGGATGGATTTCCATAAAGAATTGGAAATGCAGAAGAGGCAAATTTTCGAGAAAGTGCAGAACGAGATTGCAAAACTGCAGCAGAGAGATGAGGAGGAGAATGACGAATCTGCTGAGAATGGTATGTAA 1206 0.4096 MDDTEDDAKYAPTPYDVSHHQGYGYLNGQKLPVGSSRHSLPVRSEYAEDDNDYEEEDDGEQLGQEEDDDDGDGDDEDNDQGNGIHVPQKDENGDGDDSDDDSDDDDDDDDDKQKSYTIRIEDDLESHPKKRKLKSLISTYEFAPRVPAPAVAAPSAPKPAFGGRNALTDWTEHETFVLLDAWGDRFIQRGKKSLRSEEWQEVAERVKEVSKTERTDTQCRNRLDTLKKKYKKEKAKLVEMGGGTCKWVYFSRMDKLLSSPQQQAGLSCGLDSGEYVFSNPRVYLNRANVFDEMRDSPGNSESTGEEDSVGLHPKKKSSRKNNDETSSFKLLADSIQKFGEIYEKIENNKRQQMVELEKMRMDFHKELEMQKRQIFEKVQNEIAKLQQRDEEENDESAENGM 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1928 401 Pfam Myb/SANT-like DNA-binding domain 169 256 IPR044822 -
Prci12g1928 401 MobiDBLite consensus disorder prediction 307 323 - -
Prci12g1928 401 MobiDBLite consensus disorder prediction 93 111 - -
Prci12g1928 401 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASIL2 159 392 IPR044823 -
Prci12g1928 401 FunFam trihelix transcription factor ASIL2 170 232 - -
Prci12g1928 401 MobiDBLite consensus disorder prediction 112 132 - -
Prci12g1928 401 MobiDBLite consensus disorder prediction 78 92 - -
Prci12g1928 401 ProSiteProfiles Myb-like domain profile. 170 227 IPR001005 -
Prci12g1928 401 MobiDBLite consensus disorder prediction 1 132 - -
Prci12g1928 401 MobiDBLite consensus disorder prediction 48 77 - -
Prci12g1928 401 Gene3D - 170 232 - -
Prci12g1928 401 MobiDBLite consensus disorder prediction 293 325 - -
Prci12g1928 401 Coils Coil 342 395 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1928 Prci-Chr12 36869187 36871373 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1928 170 398 Trihelix Transcription Factor Family AT1G54060 32.857 1.14e-24 102
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Prci12g1928 Myb_DNA-bind_4 1.1e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1928 - - qsa:O6P43_018122 479.559