Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1923 ATGGGATTGAACTCTAACCGAGTGGATCATTTTGATTGCCATGAAACCTCGTTCAGAATCCACACCCACGTTCCTCTGCCTCCACCATTGCAAATTCACTCTGTTCGCCTGCCTCCCCACCAAACCACACTTCAAAAACTAAACCACAGGATCTCCGAGATATTCTTCCCTGATGATCCGTTCTTCAGATTCAACAATCAAACTTGGTTCAGAAAGTTTCTTCTGGGTATTCAATATCTCTTCCCCATCCTCCAGTGGGCGCCAGAGTACAATCTCAGTTTCCTTCGTTCTGATATCGTCTCTGGCCTCACCATTGCCAGCTTGGCCATTCCTCAGGGAATAAGTTATGCGAAACTTGCAAATTTGCCACCCATAATTGGACTATATTCAAGCTTTGTGCCTCCATTGATATATTCCTTGCTTGGAAGCTCTAGGCATCTTGGTGTTGGTCCTGTTTCAATTGCGTCTTTGGTTATGGGATCAATGTTAAACGAATCAGTTTCTTACAGTCAAGATCCAATTCTCTATCTGAAATTGGCTCTTACTGCCACCTTCTTTGCTGGTGTGTTCCAAGCTTCTTTGGGTATATTGAGATTAGGATTTATAATTGATTTCCTTTCAAAAGCAACGCTGGTTGGTTTCACGGCGGGTGCAGCGATCATTGTGTCACTTCAACAGCTTAAAGGGATACTTGGAATTGTTCACTTCACAAACCAGATGCAAATAGTTCCTGTATTGACCTCTGTGTTCGAAAGCAGAAGCGAGTGGTCATGGCAAACCATTGCCCTAGGACTCAGCTTCCTGACCTTTCTGCTGACAACAAGACACATTAGCTTGAAGAAACCAAAACTATTCTGGGTTTCAGCAGCAGCCCCGTTGACGTCAGTTATTCTATCAACACTTTTGGTGTTCTGTCTCAGAAATAAAGATCATGAAATCGCAATTATTGGCCACTTGCCAAAGGGAATCAATCCACCATCATCAAACATGTTATACTTCAATGGCCCATATTTAGCACTTGCTATCAAAACCGGGATTGTTACTGGAATATTGTCTCTCACTGAAGGAATAGCAGTTGGAAGAACATTTGCTACACTTAAGAACTATCAAGTGGATGGAAACAAAGAAATGATGGCCATTGGTCTTATGAACATAGCTGGATCTTGTTCTTCATGCTATGTCACAACGGGATCTTTCTCTCGATCGGCTGTTAATGTCAATGCTGGAGCACAGACAACAGTTTCAAACATAATCATGGCTTCAGCTGTTCTAGTGACTCTTCTTTTTCTCATGCCACTGTTTTATTACACGCCAAATGTTGTCTTAGCAACCATTATAGTCTCTGCTGTAATTGGACTAATAGATTTTCAAGCTGCGTATGAACTGTGGAAGGTTGATAAGATTGACTTCTTAGCTTGTTTGTGCTCCTTCTGTGGTGTGGTCTTCATATCAGTACCTCTTGGCCTTGGTATAGCAGTGGGAATATCTATCTTCAAGATCCTACTTCACGTGTCTCGACCAAACACTCTGGTTTTGGGAAACATACCAGGAACACAGATATACCATAACCTAAACCAATACAAAGAAGCTTCAAGGATTCCTTCATTTCTCATTCTAGCTGTTGAGTCACCCATTTACTTCGCCAATTCAACTTACCTGCAAGAAAGAATACTCAGATGGGTACGAGAAGAGGAAGAGCGTGTGAAAGCAAACAAAGAAAGTACATTGAACTGCTTAATCTTGGACATGACAGCTGTGACTGCCATAGACACAAGTGGGCTTGACACACTACGTGAACTTAGAAAGATGCTGGAAAAAAGATCAATTCAGCTTGTGCTGGCAAATCCGGTTGGAAATGTGATGGAGAAGTTACACAAGTCAAAAGTATTGGACTCTTTTGAGGAGAAAGGACTGTATCTCACTGTGGCAGAAGCTGTGGCTGCCATTTCAATTCCCTGA 1959 0.4222 MGLNSNRVDHFDCHETSFRIHTHVPLPPPLQIHSVRLPPHQTTLQKLNHRISEIFFPDDPFFRFNNQTWFRKFLLGIQYLFPILQWAPEYNLSFLRSDIVSGLTIASLAIPQGISYAKLANLPPIIGLYSSFVPPLIYSLLGSSRHLGVGPVSIASLVMGSMLNESVSYSQDPILYLKLALTATFFAGVFQASLGILRLGFIIDFLSKATLVGFTAGAAIIVSLQQLKGILGIVHFTNQMQIVPVLTSVFESRSEWSWQTIALGLSFLTFLLTTRHISLKKPKLFWVSAAAPLTSVILSTLLVFCLRNKDHEIAIIGHLPKGINPPSSNMLYFNGPYLALAIKTGIVTGILSLTEGIAVGRTFATLKNYQVDGNKEMMAIGLMNIAGSCSSCYVTTGSFSRSAVNVNAGAQTTVSNIIMASAVLVTLLFLMPLFYYTPNVVLATIIVSAVIGLIDFQAAYELWKVDKIDFLACLCSFCGVVFISVPLGLGIAVGISIFKILLHVSRPNTLVLGNIPGTQIYHNLNQYKEASRIPSFLILAVESPIYFANSTYLQERILRWVREEEERVKANKESTLNCLILDMTAVTAIDTSGLDTLRELRKMLEKRSIQLVLANPVGNVMEKLHKSKVLDSFEEKGLYLTVAEAVAAISIP 652
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1923 652 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Prci12g1923 652 NCBIfam sulfate permease 82 645 IPR001902 GO:0016020|GO:0055085
Prci12g1923 652 PANTHER SULFATE TRANSPORTER 45 649 IPR001902 GO:0016020|GO:0055085
Prci12g1923 652 SUPERFAMILY SpoIIaa-like 531 649 IPR036513 -
Prci12g1923 652 CDD STAS_SulP_like_sulfate_transporter 527 642 - -
Prci12g1923 652 ProSiteProfiles STAS domain profile. 526 649 IPR002645 -
Prci12g1923 652 FunFam Sulfate transporter 31 506 651 - -
Prci12g1923 652 Pfam STAS domain 527 645 IPR002645 -
Prci12g1923 652 Gene3D STAS domain 506 650 IPR036513 -
Prci12g1923 652 Pfam Sulfate permease family 95 474 IPR011547 GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1923 Prci-Chr12 36852656 36858209 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1923 1 650 Inorganic Solute Cotransporters AT3G15990 73.538 0.0 998
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1923 K17471 - gmx:100812617 1072