Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1889 ATGGAGGGTGGTGATATTTACAAAGCCAGTAGCAGTTTGTTACGAGCAAGCAGTTCTTCAGCATGGAGGAACACGTCCATGGACGCTTTTTCGAGGTCTTCGCACAGAGTAGACGACGACGACGACGACGAAGAGGCTCTCAAATGGGCTGCACTTGAGAGGCTTCCTACTTATAGTCGTTTAAGGAAAGGCTTGTTGACCTCTTCACACGGAGAGATCAATGAAATCGATGTCTCTGATATTGGATTACAAGAAAGAAAGAAACTGCTCGAGAGATTGGTTAAGGTTGCTGAAGAAGACAATGAGAAGTTTTTGTTGAAACTCAGGGAAAGAATTGATCGAGTTGGGATTGAGATTCCGACAATCGAAGTTCGGTTTGAGCTTTTGAACGTCGAGGCAGAGGCTTATGTTGGAAGTAGAGCGATGCCGACATTCTTCAACTTCGTGATCAATATATTTGAGAATTGCTTGAATTGTCTCCATATTCTTCCAAGCAAAAAGAAGCATATGAATATCCTTAAAAAAGTTAATGGAATTGTGAGACCACGTAGGATGACACTACTTTTGGGTCCTCCAAGTTCTGGAAAAACCACACTCCTTTTGGCTCTTGCGGGAAAACTGGATCCGGACCTTGAGGTTTCAGGGAAAGTGAGTTATAATGGACATGAAATGAATGAGTTTGTAGCTCAAAGAACAGCAGCTTATATAAGTCAAAACGATGTACATATTGGAGAAATGACAGTAAGAGAAACCTTGGCTTTTTCTGCAAGCCAAGGGGTAGGATCACGTTATGACTTGCTTGCTGAGCTATCAAGAAGAGAGATAGAAGCAAATATTAAGCCTGATCCAGATATTGATATCTACATGAAGGCAACTGCCTCTAAAGGCCAGGAGGCAAACGAGATGATGACTGAGTATGTACTTAAGATTTTGGGGCTGGAAATTTGTGCTGATACTATGGTTGGAGATCAAATGTTACGTGGCATCTCTGGCGGACAACGGAAACGTGTTACTACAGGAGAGATGATGGTTGGACCAGCAAATGCAATGTTCATGGACGAAATATCCACAGGCTTAGATAGTTCTACAACTTTTCAAATTGTGAAATGTCTAAGGCAAATTGTTCACATTATGAATGGAACTGCACTTATCTCTTTGCTACAGCCTGCACCTGAGGCTTATGAGCTTTTTGATGACATTATTCTTCTCTCTGATGGCCAAATTGTGTACCAAGGACCACGTGAACATGTCCTTGAGTTTTTTGAGCATATGGGTTTTAAATGTCCTGAGAGGAAAGGTGTTGCTGACTTCCTTCAAGAAGTTACTTCAAAGAAGGATCAAGAGCAGTATTGGATGCATAGAGATGAGCCATACAGTTTTGTGACAGTGACTGAATTTGCTGAGGCATTTCAATCATTTCATGTGGGTAGAAAAATTGGAGATGAGCTTTCTGTTCCATTTGATAAGGCCAAGAACCATCCAGCTGCTTTAACAACCAAGAAATATGGTATTAGCAAGATGGAATTGCTCAAAGTTAATTTCTCAAGAGAGTTCTTGCTTATGAAAAGGAACTCATTTGTCTACATATTCAAGCTATGCCAGCTTTCAATAATGGCAATAATAGCAATGACAGTATTCCTACGAACTGAGATGCACAAGGATTCAGTGGACCAAGGAGGATTTTATGTTGGAGCTTTGTTTTTTGCTATTGTAATGTTAATGTTCAATGGGATGTCTGAGATGTCTATGACTATTGGGAAGCTTCCTGTTTTCTACAAGCAACGAGACCTCTTTTTCTATCCTGCATGGGCATATGCTATTCCTGGTTGGATCCTCAAGATCCCAATTACGGTTGAAGCTATTGTTTGGGTTGGCCTAACCTATTATGTTATTGGATTTGACTCGAATGCTGGCAGGTTTTTCAAGCAATGCTTTCTACTATTTGTACTTGGACAATTAGCTTCTGCAATGTTCAGAACAATTGCAGCAACAAGTAGAAACATGATAATTGCAAATACATTTGGAGCATTTGCAATAGTCACTCTTCTAACATTGGGAGGCTTCATCTTGTCAAGAGAGGATATCAAGAAATGGTGGATATGGGGTTATTGGATTTCACCTATGATGTATGGCCAGAATGCTATAATGGTTAATGAGTTCCTTGGGCATAGTTGGAACCATGTCGTCTCAGGTTCATCTGAGCCACTGGGAGTTGTAATTCTCAAGTCTCGTGGGTTCTTCACACATGCATATTGGTACTGGATAGGTGTTGGAGCATTGATTGGATTTATACTTTTACTCAATATTACTTTCACTCTAGCACTCACATTTCTCAGTCCATTTGAGAAGCCACAAGCTGTAATACCTGAAGAATCTCCTGACAAAGATCAAGAAAGTATTGAGTTAACAAGTAGACAAGGTAGCATGGATGATAAAGAGAGTGCCTCTTCAAGGTCTACATCAGTAATGTCAGAAGGAATGGTTAATTCAAGCCAAAATAGGAAAAGAGGAATGGTTCTTCCATTTGAACCACATTCAATCACCTTTGATGAAATTACTTACTCTGTTGACATGCCTCAGGAGATGAAGATGCAAGGTGTAGTTGAGGACAAACTAGTGCTTCTAAGAGGTGTTAGTGGAGCATTTAGGCCAGGTGTTCTCACAGCTCTGATGGGTGTGAGTGGAGCAGGAAAAACAACTTTAATGGATGTTCTAGCGGGTAGGAAAACTGGTGGATATATTGAAGGCAACATAACTATTTCAGGATATCCCAAAAAGCAAGAAACTTTTGCTCGAATCTCAGGTTATTGTGAGCAGAATGATATTCACTCTCCTCATGTCACAGTTTATGAATCCTTACTTTACTCAGCATGGCTTCGTTTGTCACATGAAGTTGATTCCAAAAGTAGAAAGATGTTTATTGAGGAAGTGATGGAACTAGTGGAATTGAACCCATTAAGGAGATCTTTGGTTGGTTTACCTGGTGAAAGTGGTCTCTCTACTGAACAGCGCAAAAGACTAACCATAGCTGTTGAGCTAGTGGCTAATCCATCAATAATTTTTATGGATGAGCCTACTTCAGGATTAGATGCAAGAGCTGCTGCAATTGTTATGAGAACAGTTAGAAATACAGTAGATACAGGAAGAACAGTAGTTTGTACCATTCACCAACCAAGCATTGACATATTTGAAGCTTTTGATGAGCTTTTATTATTGAAGCGAGGAGGACAAGAAATTTATGTTGGGCCATTAGGTCGTTATTCTCGTCATCTCATCAAGTATTTTGAGGGGATTGAAGGGATTAATAAAATTAAAGATGGGTACAACCCAGCAACTTGGATGTTAGAAGTTACAACTCAAGCACAAGAAATGGTTTTAGGTGTTGATTTTTCAGATCTATACAAAAAATCTGAACTATACAGGAGGAATAAAGAACTCATAGCAGAATTGAGCAAGCCTATTCCTGGTTCAAAAGAGCTCTATTTTGCTACACAATATGCACAACCATTTTTGGTGCAATGCATGGCTTGCTTATGGAAACAACACTGGTCATACTGGAGAAACCCTCCATATACTGCAGTAAGGCACTTGTTCACGACTTTTATAGCTTTGATCTTTGGAACAATGTTCTGGGATCTTGGATCCAAAATAAAGAAGAAACAAGATTTATATAATGCCATGGGTTCAATGTACAATGCTGTGCTCTTCCTTGGGATACAAAATGCATCTTCAGTGCAACCAGTGGTGGCTATTGAACGAACTGTATTTTATAGAGAAAAAGCTGCAGGAATGTACTCAGCATTTCCCTATGCATTTGCACAAGTTACAATAGAGCTACCTTATATTCTGGCACAAGCTGTAACATATGGTGTGATAGTATATGCCATGATGGGATTTGATTGGACTGTAGCAAAATTCTTTTGGTATCTCTTCTTTATGTACTTCACATTCCTATACTTCACATTTTATGGCATGATGACTGTAGCTGTCACTCCAAATCATCATGTTGCTGCCATTGTTGCTGCTGCATTTTATGCAGTGTGGAATCTCTTTTCAGGATTCCTCATCCCAAGAATCGGGATTCCGGTGTGGTGGAGATGGTACTATTGGGCATGTCCAGTAGCGTGGACTTTGTATGGATTATTGGCTTCGCAATATGGAGATGTGACGTCGACCATTGAGGGAGGTGTAGCAGTAAATGAGTTTCTTCAAAGTTATTTTGGATTTAAAGATGATTTTGTTGGAGTTGTTGCTGTTGTTGTTGTTGCCTTCACTGTCTTCTTTGCATTCATCTTTGCCTTTTCTATAAAAGTCTTCAACTTTCAGAGGCGATAA 4335 0.3984 MEGGDIYKASSSLLRASSSSAWRNTSMDAFSRSSHRVDDDDDDEEALKWAALERLPTYSRLRKGLLTSSHGEINEIDVSDIGLQERKKLLERLVKVAEEDNEKFLLKLRERIDRVGIEIPTIEVRFELLNVEAEAYVGSRAMPTFFNFVINIFENCLNCLHILPSKKKHMNILKKVNGIVRPRRMTLLLGPPSSGKTTLLLALAGKLDPDLEVSGKVSYNGHEMNEFVAQRTAAYISQNDVHIGEMTVRETLAFSASXQGVGSRYDLLAELSRREIEANIKPDPDIDIYMKATASKGQEANEMMTEYVLKILGLEICADTMVGDQMLRGISGGQRKRVTTGEMMVGPANAMFMDEISTGLDSSTTFQIVKCLRQIVHIMNGTALISLLQPAPEAYELFDDIILLSDGQIVYQGPREHVLEFFEHMGFKCPERKGVADFLQEVTSKKDQEQYWMHRDEPYSFVTVTEFAEAFQSFHVGRKIGDELSVPFDKAKNHPAALTTKKYGISKMELLKVNFSREFLLMKRNSFVYIFKLCQLSIMAIIAMTVFLRTEMHKDSVDQGGFYVGALFFAIVMLMFNGMSEMSMTIGKLPVFYKQRDLFFYPAWAYAIPGWILKIPITXVEAIVWVGLTYYVIGFDSNAGRFFKQCFLLFVLGQLASAMFRTIAATSRNMIIANTFGAFAIVTLLTLGGFILSREDIKKWWIWGYWISPMMYGQNAIMVNEFLGHSWNHVVSGSSEPLGVVILKSRGFFTHAYWYWIGVGALIGFILLLNITFTLALTFLSPFEKPQAVIPEESPDKDQESIELTSRQGSMDDKESASSRSTSVMSEGMVNSSQNRKRGMVLPFEPHSITFDEITYSVDMPQEMKMQGVVEDKLVLLRGVSGAFRPGVLTALMGVSGAGKTTLMDVLAGRKTGGYIEGNITISGYPKKQETFARISGYCEQNDIHSPHVTVYESLLYSAWLRLSHEVDSKSRKMFIEEVMELVELNPLRRSLVGLPGESGLSTEQRKRLTIAVELVANPSIIFMDEPTSGLDARAAAIVMRTVRNTVDTGRTVVCTIHQPSIDIFEAFDELLLLKRGGQEIYVGPLGRYSRHLIKYFEGIEGINKIKDGYNPATWMLEVTTQAQEMVLGVDFSDLYKKSELYRRNKELIAELSKPIPGSKELYFATQYAQPFLVQCMACLWKQHWSYWRNPPYTAVRHLFTTFIALIFGTMFWDLGSKIKKKQDLYNAMGSMYNAVLFLGIQNASSVQPVVAIERTVFYREKAAGMYSAFPYAFAQVTIELPYILAQAVTYGVIVYAMMGFDWTVAKFFWYLFFMYFTFLYFTFYGMMTVAVTPNHHVAAIVAAAFYAVWNLFSGFLIPRIGIPVWWRWYYWACPVAWTLYGLLASQYGDVTSTIEGGVAVNEFLQSYFGFKDDFVGVVAVVVVAFTVFFAFIFAFSIKVFNFQRR 1446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1889 1446 MobiDBLite consensus disorder prediction 815 830 - -
Prci12g1889 1446 MobiDBLite consensus disorder prediction 790 814 - -
Prci12g1889 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 849 1101 IPR003439 GO:0005524
Prci12g1889 1446 FunFam ABC transporter G family member 34 160 465 - -
Prci12g1889 1446 Pfam ABC transporter 877 1029 IPR003439 GO:0005524
Prci12g1889 1446 Gene3D - 848 1093 IPR027417 -
Prci12g1889 1446 Pfam ABC transporter 173 356 IPR003439 GO:0005524
Prci12g1889 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 170 431 IPR027417 -
Prci12g1889 1446 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 157 431 IPR003439 GO:0005524
Prci12g1889 1446 PANTHER PLEIOTROPIC DRUG RESISTANCE PROTEIN 1-LIKE ISOFORM X1 10 1446 - -
Prci12g1889 1446 MobiDBLite consensus disorder prediction 790 830 - -
Prci12g1889 1446 Pfam ABC-2 type transporter 510 722 IPR013525 GO:0016020|GO:0140359
Prci12g1889 1446 Pfam ABC-2 type transporter 1175 1388 IPR013525 GO:0016020|GO:0140359
Prci12g1889 1446 CDD ABCG_PDR_domain2 846 1084 IPR034003 -
Prci12g1889 1446 Gene3D - 159 466 IPR027417 -
Prci12g1889 1446 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 872 1085 IPR027417 -
Prci12g1889 1446 Pfam ABC-transporter N-terminal 78 148 IPR029481 -
Prci12g1889 1446 Pfam Plant PDR ABC transporter associated 727 790 IPR013581 -
Prci12g1889 1446 SMART AAA_5 886 1078 IPR003593 GO:0016887
Prci12g1889 1446 SMART AAA_5 182 408 IPR003593 GO:0016887
Prci12g1889 1446 CDD ABCG_PDR_domain1 157 413 IPR034001 -
Prci12g1889 1446 Pfam ABC-2 type transporter 1058 1119 IPR043926 GO:0140359
Prci12g1889 1446 Pfam ABC-2 type transporter 389 441 IPR043926 GO:0140359
Prci12g1889 1446 FunFam ABC transporter G family member 40 863 1093 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1889 Prci-Chr12 36471225 36479458 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1889 876 1061 Calmodulin-binding Proteins AT2G36910 26.368 2.54e-06 50.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1889 K08711 - gmx:100784281 2230.29
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g0977 13 8160475 8168080 Prci12g1889 12 36471225 36479458 CCT