Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1828 ATGAGACTGTGTTCGGCGGACCATCAACAACACATAAGCCAGATTTATCCCGGATTCGAGGCATCTCAGCTGGACTGGAATGACCACAGTGGATTGTTCTTACTATCCAACAACTCAGTTTTCGCGTTTGGATTTTTCGGTACCCTCGACGTTTCCTTGTTTGTTTTAGTTGTCATTCACTTGAAAAGCTATAAAGTGGTTTGGACTGCTAACAGAGGCTTACTGGTAAGAAACTCTGATAAATTTGTGTTTGACAATACTGGGAATGCATATTTGGAAAAAGGGGGTGGTGTGGTTTGGGCAACAAACACAACAGGTCGTAAAGTCAGAGCTATGGAACTGAAAGATTCAGGTAATTTGGTATTGATTGGTGAAGATGGAAGAGTTATTTGGCAGAGTTTTAGCCATCCTACTGATACCCTATTGCCTGGTCAACTTTTTGTTGAAGGAATGAGTCTCAAAAGCTTCCCTCGTAATAACTTATTTAGTTATCTGACCTTTATGTCTGGTGACTTGGTTCTGTGTGCTGGATATGAACCTCATCAGATTTATTGGTCCCTTTCAAGTGAAAGCAATGTCAGTAAGGGGGTTCATTTCCATTCTGCTTCTTTGGTTTCAAATTCTTGGAATTTTTATGACAAAGGTGGAGATTTAAAATGGCAATCTATCTTCTCTGATAAATCTGATCCTCAGGCGATGTGGGCGGGTATATTAGATCCTAATGGTGCAATCTCTTTTTATGATCTTAACAAGGGAAAATCTGTTACCCCTGAAGCAACTAGAATACCACAAGATCCTTGTGGCATTGCTGGGCCATGTGATCCTTATTATGTTTGCTTCTTTGAGAACTGGTGTGAATGTCCTGCACTTCTCAAATCTCGTTTCAATTGCAAGCCTCCAATCACCACGTCGTGTTCTCAAACCCGAGAAGACCTTCTATATGTCGGTGAAAAGCTCGATTACCTTGTCCTCAAGTATGTTCAACCAGTTTCTAAATCAACCCTGAGCGCTTGCAAAGAAGGTTGCTTAAGAAACTGCTCTTGCCTTGTGCTTTTCTTTGACAACAGTACTGGAAAGTGCTACCATTTTGATCAGACAGGAAGCTTCCAACGCTCTAAGGCAAATTCTGGAGGCTATGTTTCATTTATGAAGATCTCTATTGAAGATGGATATGGAAGAAAAGGAAAGAATCCAACTCTATTGGTCGCTGTTGTAGTTAGTTTCACAATTCTGGTAATTATTGGACTAGTGCTGGGGTTCTGGCACTACACCAAAAATAAGCATCTCTTGAAGGATTCTCTAGAAACGTTAGAGGAGGAGGATTTCTTGGACAGTCTTCATGGTATGCCAACTCGTTTTAGTTATAGTACTCTAAGTAAAGCCACCAAGAATTTCTCTACAAAAATTGGTGAAGGAGGGTTTGGCTCAGTTTACCTAGGAGTGCTTGAAGATAGATCTCAATTGGCTGTGAAGAAACTGGAAGGACTAGGACAAGGAGCCAAAGAGTTCAAAGCTGAAGTTTCCAGCATTGGAAGTATTCACCATGTTCATCTGGTGAAGCTGAAGGGCTTCTGTGCCGAAGGCCCTCATCGCCTTCTTGTGTATGAATACATGGCAAGAGGTTCTCTGAACAGATGGATCTTTAAAAGCCATGAAAATGCTTTCTTACTGAATTGGAATACCAGATTCAACATTGCATTAGGTACAGCAAGGGGACTGGCCTATCTTCATGAGGAGTGTGAGGTGAAGATCATACACTGTGATATCAAACCAGAGAATGTCCTTCTTGATGAAAACTTCACAGCTAAAGTTTCAGACTTCGGTTTGGCTAAGCTCATGAGCCGTGAACAAAGCCATGTCTTCACAACACTAAGGGGAACAAGAGGGTATCTAGCACCAGAATGGATCACCAACTATGCAATTTCGGAAAAGAGTGACGTGTACAGCTACGGGATGGTCCTGCTTGAGATTATTGGAGGAAGGAGGAATTATGATCAATGGGAAGGCTCAGAGAAAGCTCATTTTCCTTCTTACGCCTTCAGGATGATGGACGAAAGAAAACTCAAGCAAGTTCTTGATCCAATGATTGACATTGATGAGAATGATGAAAGAGCTTCCACTGCAGTGAAAGTTGCTCTATGGTGCATACAAGATGACATGAGTTTAAGGCCTCCCATGACCAAGGTTGTTCAAATGCTTGAAGGTGTTATCCCTGTACCTGAGCCCCCATCATTATCCACTTCAAGTTCTTATTCATCATTCCTAAAAATGGGTAGTGAACAAGCTTCTTCATCCACACAGGCCTCCTTTTACGGTAATGTACCCCTATCTTGTGTTCAGTTGTCAGGACCCAGATGA 2358 0.4182 MRLCSADHQQHISQIYPGFEASQLDWNDHSGLFLLSNNSVFAFGFFGTLDVSLFVLVVIHLKSYKVVWTANRGLLVRNSDKFVFDNTGNAYLEKGGGVVWATNTTGRKVRAMELKDSGNLVLIGEDGRVIWQSFSHPTDTLLPGQLFVEGMSLKSFPRNNLFSYLTFMSGDLVLCAGYEPHQIYWSLSSESNVSKGVHFHSASLVSNSWNFYDKGGDLKWQSIFSDKSDPQAMWAGILDPNGAISFYDLNKGKSVTPEATRIPQDPCGIAGPCDPYYVCFFENWCECPALLKSRFNCKPPITTSCSQTREDLLYVGEKLDYLVLKYVQPVSKSTLSACKEGCLRNCSCLVLFFDNSTGKCYHFDQTGSFQRSKANSGGYVSFMKISIEDGYGRKGKNPTLLVAVVVSFTILVIIGLVLGFWHYTKNKHLLKDSLETLEEEDFLDSLHGMPTRFSYSTLSKATKNFSTKIGEGGFGSVYLGVLEDRSQLAVKKLEGLGQGAKEFKAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLNRWIFKSHENAFLLNWNTRFNIALGTARGLAYLHEECEVKIIHCDIKPENVLLDENFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRMMDERKLKQVLDPMIDIDENDERASTAVKVALWCIQDDMSLRPPMTKVVQMLEGVIPVPEPPSLSTSSSYSSFLKMGSEQASSSTQASFYGNVPLSCVQLSGPR 785
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1828 785 ProSiteProfiles Protein kinase domain profile. 463 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1828 785 ProSitePatterns Protein kinases ATP-binding region signature. 469 492 IPR017441 GO:0005524
Prci12g1828 785 CDD STKc_IRAK 469 735 - -
Prci12g1828 785 SMART blect_4 25 137 IPR001480 -
Prci12g1828 785 Pfam D-mannose binding lectin 66 146 IPR001480 -
Prci12g1828 785 Gene3D - 27 136 IPR036426 -
Prci12g1828 785 CDD PAN_AP_plant 330 386 - -
Prci12g1828 785 SUPERFAMILY Protein kinase-like (PK-like) 446 734 IPR011009 -
Prci12g1828 785 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 26 744 - -
Prci12g1828 785 FunFam serine/threonine-protein kinase PBS1-like 431 537 - -
Prci12g1828 785 PIRSF SRK 3 780 IPR024171 GO:0004674
Prci12g1828 785 ProSiteProfiles PAN/Apple domain profile. 305 386 IPR003609 -
Prci12g1828 785 Pfam Protein kinase domain 466 731 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1828 785 ProSiteProfiles Bulb-type lectin domain profile. 19 135 IPR001480 -
Prci12g1828 785 Gene3D Phosphorylase Kinase; domain 1 429 537 - -
Prci12g1828 785 FunFam S-receptor-like kinase 5 538 742 - -
Prci12g1828 785 SUPERFAMILY alpha-D-mannose-specific plant lectins 64 187 IPR036426 -
Prci12g1828 785 CDD B_lectin 30 137 IPR001480 -
Prci12g1828 785 SMART serkin_6 463 737 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1828 785 Gene3D Transferase(Phosphotransferase) domain 1 538 737 - -
Prci12g1828 785 ProSitePatterns Serine/Threonine protein kinases active-site signature. 584 596 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1828 Prci-Chr12 36102490 36105678 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1828 401 743 Receptor kinase-like Gene Family AT5G20050 45.479 1.91e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci12g1828 Pkinase 3.4e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1828 - - gmx:100786024 1156.35