Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1827 ATGAACTTATACAGATGTGGAACCTTGTTTATCTGTGTGTTTTTTCTGATGAGACTGTGTTCGGCGGACCATCAACAACACATAAGCCAGATTTATCCCGGATTCGAGGCATCTCAGCTGGACTGGAATGACCACAGTGGATTGTTCTTACTATCCAACAACTCAGTTTTCGCGTTTGGATTTTTCGGTACCCTCGACGTTTCCTTGTTTGTTTTAGTTGTCATTCACTTGAAAAGCTATAAAGTGGTTTGGACTGCTAACAGAGGCTTACTGGTAAGAAACTCTGATAAATTTGTGTTTGACAATACTGGGAATGCATATTTGGAAAAAGGGGGTGGTGTGGTTTGGGCAACAAACACAACAGGTCGTAAAGTCAGAGCTATGGAACTGAAAGATTCAGGTAATTTGGTATTGATTGGTGAAGATGGAAGAGTTATTTGGCAGAGTTTTAGCCATCCTACTGATACCCTATTGCCTGGTCAACTTTTTGTTGAAGGAATGAGTCTCAAAAGCTTCCCTCGTAATAACTTATTTAGTTATCTGACCTTTATGTCTGGTGACTTGGTTCTGTGTGCTGGATATGAACCTCATCAGATTTATTGGTCCCTTTCAAGTGAAAGCAATGTCAGTAAGGGGGTTCATTTCCATTCTGCTTCTTTGGTTTCAAATTCTTGGAATTTTTATGACAAAGGTGGAGATTTAAAATGGCAATCTATCTTCTCTGATAAATCTGATCCTCAGGCGATGTGGGCGGGTATATTAGATCCTAATGGTGCAATCTCTTTTTATGATCTTAACAAGGGAAAATCTGTTACCCCTGAAGCAACTAGAATACCACAAGATCCTTGTGGCATTGCTGGGCCATGTGATCCTTATTATGTTTGCTTCTTTGAGAACTGGTGTGAATGTCCTGCACTTCTCAAATCTCGTTTCAATTGCAAGCCTCCAATCACCACGTCGTGTTCTCAAACCCGAGAAGACCTTCTATATGTCGGTGAAAAGCTCGATTACCTTGTCCTCAAGTATGTTCAACCAGTTTCTAAATCAACCCTGAGCGCTTGCAAAGAAGGTTGCTTAAGAAACTGCTCTTGCCTTGTGCTTTTCTTTGACAACAGTACTGGAAAGTGCTACCATTTTGATCAGACAGGAAGCTTCCAACGCTCTAAGGCAAATTCTGGAGGCTATGTTTCATTTATGAAGATCTCTATTGAAGATGGATATGGAAGAAAAGGAAAGAATCCAACTCTATTGGTCGCTGTTGTAGTTAGTTTCACAATTCTGGTAATTATTGGACTAGTGCTGGGGTTCTGGCACTACACCAAAAATAAGCATCTCTTGAAGGATTCTCTAGAAACGTTAGAGGAGGAGGATTTCTTGGACAGTCTTCATGGTATGCCAACTCGTTTTAGTTATAGTACTCTAAGTAAAGCCACCAAGAATTTCTCTACAAAAATTGGTGAAGGAGGGTTTGGCTCAGTTTACCTAGGAGTGCTTGAAGATAGATCTCAATTGGCTGTGAAGAAACTGGAAGGACTAGGACAAGGAGCCAAAGAGTTCAAAGCTGAAGTTTCCAGCATTGGAAGTATTCACCATGTTCATCTGGTGAAGCTGAAGGGCTTCTGTGCCGAAGGCCCTCATCGCCTTCTTGTGTATGAATACATGGCAAGAGGTTCTCTGAACAGATGGATCTTTAAAAGCCATGAAAATGCTTTCTTACTGAATTGGAATACCAGATTCAACATTGCATTAGGTACAGCAAGGGGACTGGCCTATCTTCATGAGGAGTGTGAGGTGAAGATCATACACTGTGATATCAAACCAGAGAATGTCCTTCTTGATGAAAACTTCACAGCTAAAGTTTCAGACTTCGGTTTGGCTAAGCTCATGAGCCGTGAACAAAGCCATGTCTTCACAACACTAAGGGGAACAAGAGGGTATCTAGCACCAGAATGGATCACCAACTATGCAATTTCGGAAAAGAGTGACGTGTACAGCTACGGGATGGTCCTGCTTGAGATTATTGGAGGAAGGAGGAATTATGATCAATGGGAAGGCTCAGAGAAAGCTCATTTTCCTTCTTACGCCTTCAGGATGATGGACGAAAGAAAACTCAAGCAAGTTCTTGATCCAATGATTGACATTGATGAGAATGATGAAAGAGCTTCCACTGCAGTGAAAGTTGCTCTATGGTGCATACAAGATGACATGAGTTTAAGGCCTCCCATGACCAAGGTTGTTCAAATGCTTGAAGGTGTTATCCCTGTACCTGAGCCCCCATCATTATCCACTTCAAGTTCTTATTCATCATTCCTAAAAATGGGTAGTGAACAAGCTTCTTCATCCACACAGGCCTCCTTTTACGGTAATGTACCCCTATCTTGTGTTCAGTTGTCAGGACCCAGATGA 2406 0.4165 MNLYRCGTLFICVFFLMRLCSADHQQHISQIYPGFEASQLDWNDHSGLFLLSNNSVFAFGFFGTLDVSLFVLVVIHLKSYKVVWTANRGLLVRNSDKFVFDNTGNAYLEKGGGVVWATNTTGRKVRAMELKDSGNLVLIGEDGRVIWQSFSHPTDTLLPGQLFVEGMSLKSFPRNNLFSYLTFMSGDLVLCAGYEPHQIYWSLSSESNVSKGVHFHSASLVSNSWNFYDKGGDLKWQSIFSDKSDPQAMWAGILDPNGAISFYDLNKGKSVTPEATRIPQDPCGIAGPCDPYYVCFFENWCECPALLKSRFNCKPPITTSCSQTREDLLYVGEKLDYLVLKYVQPVSKSTLSACKEGCLRNCSCLVLFFDNSTGKCYHFDQTGSFQRSKANSGGYVSFMKISIEDGYGRKGKNPTLLVAVVVSFTILVIIGLVLGFWHYTKNKHLLKDSLETLEEEDFLDSLHGMPTRFSYSTLSKATKNFSTKIGEGGFGSVYLGVLEDRSQLAVKKLEGLGQGAKEFKAEVSSIGSIHHVHLVKLKGFCAEGPHRLLVYEYMARGSLNRWIFKSHENAFLLNWNTRFNIALGTARGLAYLHEECEVKIIHCDIKPENVLLDENFTAKVSDFGLAKLMSREQSHVFTTLRGTRGYLAPEWITNYAISEKSDVYSYGMVLLEIIGGRRNYDQWEGSEKAHFPSYAFRMMDERKLKQVLDPMIDIDENDERASTAVKVALWCIQDDMSLRPPMTKVVQMLEGVIPVPEPPSLSTSSSYSSFLKMGSEQASSSTQASFYGNVPLSCVQLSGPR 801
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1827 801 FunFam S-receptor-like kinase 5 554 758 - -
Prci12g1827 801 ProSitePatterns Serine/Threonine protein kinases active-site signature. 600 612 IPR008271 GO:0004672|GO:0006468
Prci12g1827 801 PIRSF SRK 3 796 IPR024171 GO:0004674
Prci12g1827 801 CDD STKc_IRAK 485 751 - -
Prci12g1827 801 Pfam Protein kinase domain 482 747 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1827 801 Pfam D-mannose binding lectin 82 162 IPR001480 -
Prci12g1827 801 CDD PAN_AP_plant 346 402 - -
Prci12g1827 801 SMART serkin_6 479 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1827 801 FunFam serine/threonine-protein kinase PBS1-like 447 553 - -
Prci12g1827 801 Gene3D Phosphorylase Kinase; domain 1 445 553 - -
Prci12g1827 801 ProSiteProfiles Bulb-type lectin domain profile. 35 151 IPR001480 -
Prci12g1827 801 SMART blect_4 41 153 IPR001480 -
Prci12g1827 801 Gene3D Transferase(Phosphotransferase) domain 1 554 753 - -
Prci12g1827 801 Gene3D - 43 152 IPR036426 -
Prci12g1827 801 ProSiteProfiles PAN/Apple domain profile. 321 402 IPR003609 -
Prci12g1827 801 SUPERFAMILY Protein kinase-like (PK-like) 462 750 IPR011009 -
Prci12g1827 801 SUPERFAMILY alpha-D-mannose-specific plant lectins 80 203 IPR036426 -
Prci12g1827 801 ProSiteProfiles Protein kinase domain profile. 479 753 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1827 801 CDD B_lectin 46 153 IPR001480 -
Prci12g1827 801 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 42 760 - -
Prci12g1827 801 ProSitePatterns Protein kinases ATP-binding region signature. 485 508 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1827 Prci-Chr12 36102488 36105678 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1827 417 759 Receptor kinase-like Gene Family AT5G20050 45.479 2.13e-93 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Prci12g1827 Pkinase 3.6e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1827 - - gmx:100786024 1175.61