Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1818 ATGGGTATGGCTTTTTGCCCATTATTTTTCTGTGCAAAAGGTTCCAATCGAAAAGCACGAGGTAAGAAAGTGTCTACATGGAGAGTCTTTTCTTTGAAGGAACTACACTCCGCAACAAATAATTTTAACTATGATAACAAGCTTGGAGAAGGAGGATTTGGCAGTGTATACTGGGGCCAGCTCTGGGATGGATCACAAATTGCAGTGAAGAGATTAAAAGTTTGGAGCAACAAAGCAGATATGGAATTTGCTTCAGAAGTTGAGATACTGGCCAGAGTAAGACACAAGAATCTTCTTAGTCTACGCGGCTATTGTGCTGAAGGGAAAGAAAGATTAATCGTGTATGATTATATGCCAAATTTGAGCTTACACTCTCATCTTCATAGACAGAACTCTTCAGATTGTCTTCTTAATTGGAACAGGCGCTTGAATATCGCAATTGGGTCAGCTGAGGGAATTGAATATCTTCACCACCAAGCAACACCACACATAATCCACAGAGATATCAAATCAAGCAATGTGTTATTGGATGCAGATTTCCAGGCTCAGGTTGCTGATTTTGGTTTTGCTAAGTTGATTCCTGATGGGGCAACCCATGTGACAACAAGAGTGAAGGGAACCCTTGGCTACCTAGCACCAGAATATGCGATGCTTGGCAAGGCGTCAGAGAGTTGTGATGTCTATAGTTTTGGAATTCTCCTACTAGAACTTGCTAGTGGCAAGAAACCAATTGAAAAACTGAGTACTTCAATGAAGCGATCGATAGCTGATTGGGCACTACCATTGGCTATTGAGAAGAGATATAGTGAACTTGCAGATCCAAAGCTAAAGGGTAAGTATGTGGAGGAAGAACTCAAAAGAATGATTCTTGTTGCACTTGTATGTGCTCAAAGGGAGCCTGAGAAGAGACCTACCATGCTTGAGGTGGTAGAGCTGCTTAAGGGAGAATCTAAGGATAAGCTATCTGAGTTAGGAAAGAATGAATTGTTCAGAAACCATCCAGGTTTAGATGACAATGATGGGGCATCAGTTGCTGAAGATAGTTCAGACTTCATCACAGAAGAGAAGGAATCAACGTCTGAGATGATAGAGAGTAGTGGGCTATAG 1107 0.4155 MGMAFCPLFFCAKGSNRKARGKKVSTWRVFSLKELHSATNNFNYDNKLGEGGFGSVYWGQLWDGSQIAVKRLKVWSNKADMEFASEVEILARVRHKNLLSLRGYCAEGKERLIVYDYMPNLSLHSHLHRQNSSDCLLNWNRRLNIAIGSAEGIEYLHHQATPHIIHRDIKSSNVLLDADFQAQVADFGFAKLIPDGATHVTTRVKGTLGYLAPEYAMLGKASESCDVYSFGILLLELASGKKPIEKLSTSMKRSIADWALPLAIEKRYSELADPKLKGKYVEEELKRMILVALVCAQREPEKRPTMLEVVELLKGESKDKLSELGKNELFRNHPGLDDNDGASVAEDSSDFITEEKESTSEMIESSGL 368
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1818 368 ProSiteProfiles Protein kinase domain profile. 42 336 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1818 368 PANTHER OS01G0253100 PROTEIN 23 319 - -
Prci12g1818 368 Pfam Protein kinase domain 43 310 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1818 368 PIRSF ILK 9 327 - -
Prci12g1818 368 ProSitePatterns Serine/Threonine protein kinases active-site signature. 164 176 IPR008271 GO:0004672|GO:0006468
Prci12g1818 368 CDD STKc_IRAK 48 315 - -
Prci12g1818 368 SMART serkin_6 42 313 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1818 368 Gene3D Phosphorylase Kinase; domain 1 13 117 - -
Prci12g1818 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 118 329 - -
Prci12g1818 368 MobiDBLite consensus disorder prediction 324 368 - -
Prci12g1818 368 ProSitePatterns Protein kinases ATP-binding region signature. 48 70 IPR017441 GO:0005524
Prci12g1818 368 Gene3D Transferase(Phosphotransferase) domain 1 118 330 - -
Prci12g1818 368 SUPERFAMILY Protein kinase-like (PK-like) 24 313 IPR011009 -
Prci12g1818 368 FunFam PTI1-like tyrosine-protein kinase At3g15890 14 117 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1818 Prci-Chr12 35980675 35983769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1818 30 316 Trihelix Transcription Factor Family AT1G70460 51.890 6.80e-96 298
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-XV Prci12g1818 Pkinase 3.9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1818 - - qsa:O6P43_018014 615.535