Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1815 ATGGCCATTACATCTCTCACTTTGTCTTCTCTGCTTCGACCCTCCACTTCTTCTATTTCTTGTTCTTCTTCTTCTTACTTCCTCGGTGGGGTCCATCTCCGTTCCCATGGAAGCTTCATCTCTATCCATTCGCTTTATTCGATGTCAAATACGGAGGCCCCTTCTAGGCGCCTGCGAATAGTGGCTGTTGCTTCTGGCGACTATTATGCTGCTCTTGGAGTCCCCAAATCCGCCACAAGCAAGGAAATTAAAGCGGCCTATCGAAGGTTAGCTCGCCAGTACCATCCTGATGTGAACAAGGAGCCTGGAGCAACTGAAAAGTTCAAAGAGATTAGTGCTGCATATGAGGTACTATCGGATGATAAAAAGAGGGCTTTATATGATCAATATGGAGAGGCTGCAGTCAACGGCACAATGGGAGGAGCATCTAGTGCTTATGCGACTAATCCATTTGATTTATTCGAGACATTTTTTGGGCCAAATATGGGTGGTTTCCCTGGAATGGATCCAGCTGGATTTGGAACACGTCGTCGCAGCACTGTTACTAAGGGAGAAGATATCCGTTATGACATGTCCTTGGAATTTTCTGAGGTAATTTCTGGAGCAGAGAAAGAATTTGATCTTTCTCATTTGGAAACGTGTGAAGTTTGTGTTGGTACTGGAGCAAAGATAGGTTCCAAGATGAGAGTATGCTCAACTTGTGGTGGTCGGGGTCAGGTGATGAGGACTGAACAAACACCTTTTGGAATGTTCTCACAGGTTTCGGTATGTTCAAACTGTGGAGGGGATGGCGAAGTCATATCTCAATACTGTGGTACATGCAGCGGGAAAGGACGTCTACGAGTTAAGAAGAAAATTAAAGTCCAAGTCCCACCTGGGGTTAGTTCAGGCAGTGTATTGAGAGTTGCTGGGGAGGGTGATGCTGGACCAAGAGGGGGTCCTCCAGGAGATCTTTACGTATACCTTGATGTGAAAGAAATACCAGGAATTGAAAGAGATGGTATTAATCTCTGTTCGACAATCACAATCGGTTACCTAGATGCCATACTTGGAACCATTGTCAAGGTGAAGACAGTTGAAGGCATTTTCGAACTGCAGATACCCCCTGGTACCCAACCTGAAGATGTCCTTGTTCTTGCCAGAAAAGGCGCACCAAAATTAAACAAACCATCAGTACGTGGTGATCATTTGTTTACTGTCAAGGTTACAATACCAAAACGTATCAGTATGAAGGAACGTGAGCTTCTTGAAGAACTTGCTTTGCTGGGCAACAACACTACAAGCAACCGATCAAAATCCCGTCCTAAAACTCAATTTGCTGCAAGCAGTACAGAAGGGCCATCATCTCAAAAAGCTGAAAGTCCGGCAGCAACGGTTGCAGAAAAAGCTGAACAATCAGAAGATCAAAATGACGTATGGAAAAAGTTAAAGGATCTTGCTAGATGGAGCATTGAAGTGGCTAAAAGATAA 1470 0.4456 MAITSLTLSSLLRPSTSSISCSSSSYFLGGVHLRSHGSFISIHSLYSMSNTEAPSRRLRIVAVASGDYYAALGVPKSATSKEIKAAYRRLARQYHPDVNKEPGATEKFKEISAAYEVLSDDKKRALYDQYGEAAVNGTMGGASSAYATNPFDLFETFFGPNMGGFPGMDPAGFGTRRRSTVTKGEDIRYDMSLEFSEVISGAEKEFDLSHLETCEVCVGTGAKIGSKMRVCSTCGGRGQVMRTEQTPFGMFSQVSVCSNCGGDGEVISQYCGTCSGKGRLRVKKKIKVQVPPGVSSGSVLRVAGEGDAGPRGGPPGDLYVYLDVKEIPGIERDGINLCSTITIGYLDAILGTIVKVKTVEGIFELQIPPGTQPEDVLVLARKGAPKLNKPSVRGDHLFTVKVTIPKRISMKERELLEELALLGNNTTSNRSKSRPKTQFAASSTEGPSSQKAESPAATVAEKAEQSEDQNDVWKKLKDLARWSIEVAKR 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1815 489 SUPERFAMILY Chaperone J-domain 64 172 IPR036869 -
Prci12g1815 489 Gene3D - 214 278 - -
Prci12g1815 489 CDD DnaJ 67 120 IPR001623 -
Prci12g1815 489 Gene3D - 330 421 - -
Prci12g1815 489 Gene3D DnaJ domain 64 167 IPR036869 -
Prci12g1815 489 SUPERFAMILY HSP40/DnaJ peptide-binding domain 182 325 IPR008971 GO:0006457|GO:0051082
Prci12g1815 489 FunFam Chaperone protein dnaJ 1, mitochondrial 325 433 - -
Prci12g1815 489 SMART dnaj_3 66 123 IPR001623 -
Prci12g1815 489 FunFam Putative Mitochondrial DnaJ chaperone 273 320 - -
Prci12g1815 489 SUPERFAMILY HSP40/DnaJ peptide-binding domain 331 416 IPR008971 GO:0006457|GO:0051082
Prci12g1815 489 FunFam Chaperone protein dnaJ A6 chloroplastic 64 170 - -
Prci12g1815 489 MobiDBLite consensus disorder prediction 425 455 - -
Prci12g1815 489 FunFam Chaperone protein dnaJ A6 chloroplastic 214 278 - -
Prci12g1815 489 NCBIfam molecular chaperone DnaJ 67 420 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci12g1815 489 CDD DnaJ_C 185 408 - -
Prci12g1815 489 Gene3D - 184 320 - -
Prci12g1815 489 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 201 281 IPR036410 -
Prci12g1815 489 PRINTS DnaJ domain signature 69 87 IPR001623 -
Prci12g1815 489 PRINTS DnaJ domain signature 103 123 IPR001623 -
Prci12g1815 489 PRINTS DnaJ domain signature 87 102 IPR001623 -
Prci12g1815 489 PRINTS DnaJ domain signature 123 142 IPR001623 -
Prci12g1815 489 ProSiteProfiles dnaJ domain profile. 67 131 IPR001623 -
Prci12g1815 489 Pfam DnaJ central domain 214 278 IPR001305 GO:0031072|GO:0051082
Prci12g1815 489 ProSiteProfiles Zinc finger CR-type profile. 201 283 IPR001305 GO:0031072|GO:0051082
Prci12g1815 489 Pfam DnaJ C terminal domain 187 405 IPR002939 -
Prci12g1815 489 ProSitePatterns Nt-dnaJ domain signature. 108 127 IPR018253 -
Prci12g1815 489 MobiDBLite consensus disorder prediction 425 471 - -
Prci12g1815 489 Hamap Chaperone protein DnaJ [dnaJ]. 64 479 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Prci12g1815 489 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 25 431 - -
Prci12g1815 489 Pfam DnaJ domain 67 128 IPR001623 -
Prci12g1815 489 CDD DnaJ_zf 214 278 IPR001305 GO:0031072|GO:0051082
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1815 Prci-Chr12 35938148 35946376 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1815 68 130 C2H2 Transcription Factor Family AT1G74250 46.377 1.93e-10 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1815 K03686 - gmx:100798567 692.575