Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1807 ATGGCAGAAGTTTCTCTCAACAGTGAGCCAGCAGTAGATGATGATGCTGATGGATTTGAGATTGAAGGGGATTGTGGAATGGCAGATTTTGTAAGTCAAACTGGCATAATCCAAGGGGAGAACCCACTTCCTCCTGCTGTTGGAATGGAATTTGAGACTTATGAGGATGTATATTATTTCTACAATTGCTATGCCAAGGATCAAGGATTTGGGGTTAGAGTAAGTAATACTTGGTATAGGAAGAGCAAGGAACGTTACAGAGGAAAACTCAGCTGCAGTAGCGCTGGGTTCAAGAAAAAAAGTGAAGCCAATCGTCCAAGACCTGAAACAAGAACTGGTTGTCCCGCAATGATAAAGTTCAGGCTGATGGATTCCAAAAGGTGGAGAATTATAGAAGTGGAGCTTGAGCATAATCACTTGATAAGCCCAACAAGTGGGAAGTTCTACAAATCTCATAAGCGCCTGGGTTTGGGGACCAAAAGAACATTGCAGTTAGACAGTACCAAAGAAGTTCAGAAAGTTAGGCTATTTCGAACTGTGATTATTGATGGTGAGGCTAATGGATGTGGAGATGTTGATGGAGGACAACCCAAATGCAAAGCTGTATGGTCCAATCAATTGAAGCTGAATAAAGGTGACGCAGAGGCAATTCTAAATTTTTTTAGTCACTTGCAGTTAACAGATCCACACTTCTTCTATGTGTTGGATATCAATGAGAAGGGATGCTTGAGGAATTTGTTTTGGGCCAATGCAAGGTCAAGAGTAGCATACAAATATTTTGGTGATGTAGTTGCAATTGATACTACATGTTTGACAAGTGAGTATGAAGTTCCTTTGGTTCTATTTCTCGGATTAAATCACCATAAACAATCCATTCTGCTTGGTTGTGGATTGATTGCTGGTGAAACCATTGAATCATATACCTGGCTGTCCAGGGCATGGCTTACTTGTATTTTAGGACGCCCTCCGCAAGTCATTGTTACTGACCAATCTGGCATCATGCAAACAGTGGTTGCTGATGTTTTTCCAAGAGCTTCCCACTGTCTTTGCTTATCCAATATTATGGAAAAAATTCCAGAAAAACTGGGGGGGTTGCTAGAATATGAAGCAGTGAAAGCAGCAATTAGTGGATCACTTTATTATTCTCTGAGGACTGAGGAATTTGATGCAGCTTGGGAGGACATGATGCAGCAATATGAAATTAGAGGTCATGAGTGGCTTCAAGCATTATACGAGGACAGGAAACGGTGGGTCCCAGCTTATGTGAAGGAAACCTTCTTGGCAGGGATGTTTCTTACACAACCGAGTGATGCCACTCCATGGTTTTTCGAGGGCTACTTGTATAAACAAACTCCTCTAAAGGAATTTTTGGAAAAATACGATCAAGCTTTGCAGACAAAGATGCAGCATGAGGCTCTGGCAGATTTGGACTCAAAAAATTCAAGCTTTATGCATAAACCAAGTTGTTATTTTGAGTTGCAGATCTCAAAATTGTACACAAATGAACTATTCAGAATGTTTGAAAGGGAAATAAAAGGTATGTACTCCTGTTTAAGCACCAGAAAGATAAATGTGGATGGTCCAGTGATCTCATACATCATCAAGGAGCAAGTTGAAGTTGAAGGAAATCAGAGAGTTACAAGAGATTATGAGGTGTGTTACAATGGGTCTGAAATGGAGGTCATTTGCATGTGTGGTTTGTTCAACTTTAAAGGAATCTTGTGCAGGCATGCACTATTTATCTTAAACCAGAATGGCATAGAAGAGATCCCACCTCAGTACATTCTTTCAAGATGGAGAAAAGATCTGAAGCGAAGTTATGTTATTGATCACAAATCTAGTGGCATTGATGTAAATAACCCAATTCATAGGTATGACCATTTATATAGACGCATGGTGCAGGTTGTGGAGGAAGGTAGGAAATCGCATGACCATTTTAGGACTGCTGTGCAAGCATTGGATGAAATGTTGAACAAACTTAAACGTGTAAATTTAGAGGACCATGCAATATAG 2013 0.4029 MAEVSLNSEPAVDDDADGFEIEGDCGMADFVSQTGIIQGENPLPPAVGMEFETYEDVYYFYNCYAKDQGFGVRVSNTWYRKSKERYRGKLSCSSAGFKKKSEANRPRPETRTGCPAMIKFRLMDSKRWRIIEVELEHNHLISPTSGKFYKSHKRLGLGTKRTLQLDSTKEVQKVRLFRTVIIDGEANGCGDVDGGQPKCKAVWSNQLKLNKGDAEAILNFFSHLQLTDPHFFYVLDINEKGCLRNLFWANARSRVAYKYFGDVVAIDTTCLTSEYEVPLVLFLGLNHHKQSILLGCGLIAGETIESYTWLSRAWLTCILGRPPQVIVTDQSGIMQTVVADVFPRASHCLCLSNIMEKIPEKLGGLLEYEAVKAAISGSLYYSLRTEEFDAAWEDMMQQYEIRGHEWLQALYEDRKRWVPAYVKETFLAGMFLTQPSDATPWFFEGYLYKQTPLKEFLEKYDQALQTKMQHEALADLDSKNSSFMHKPSCYFELQISKLYTNELFRMFEREIKGMYSCLSTRKINVDGPVISYIIKEQVEVEGNQRVTRDYEVCYNGSEMEVICMCGLFNFKGILCRHALFILNQNGIEEIPPQYILSRWRKDLKRSYVIDHKSSGIDVNNPIHRYDHLYRRMVQVVEEGRKSHDHFRTAVQALDEMLNKLKRVNLEDHAI 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1807 670 Pfam MULE transposase domain 263 356 IPR018289 -
Prci12g1807 670 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 39 661 IPR031052 GO:0006355
Prci12g1807 670 ProSiteProfiles Zinc finger SWIM-type profile. 550 586 IPR007527 GO:0008270
Prci12g1807 670 SMART 26again6 561 588 IPR006564 GO:0008270
Prci12g1807 670 Pfam FAR1 DNA-binding domain 60 141 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1807 Prci-Chr12 35870015 35874480 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci12g1807 MULE 2.2e-22 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1807 - K17604 pcin:129287794 1380.16