Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1806 ATGACAGGCGATACCTCGTATTCTGCGGCCAACAAGAGCTTGTCGCCGAGTCATAACCTCGACATCACGATAGAGGAAGGATCTCCAAACAGTGAGTATTTTGTTGATGCCAAGAATGAGTGGAGTGAATTGGAGATTGATGCAGATGATCTTGAAAGTGGGAGAGATGAAACGGAGATTGTTGATTGTCATAATGGGGAATCTCAAGTAAAAGACTACCCTCCACCAGTGGTAAGGATGGAATTCGATACTTATGATGATGCCTATAATTACTACAATAGCTATGCCAAAGAACTTGGATTTGCTATTAGGGTTAAATCATCGTGGACCAAACGTAACAGCAAAGAGAAGCGTGGTGCTGTGCTCTGCTGCAACTGTGAGGGTTTCAAAACAGTGAAGGAAGTAAATAGCCGAAGGAAAGAAACAAGAACAGGTTGTCTAGCAATGATTAGGTTGAGATTAGTGGAATCTAACAGGTGGAGAGTTGATGAAGTCAAGCTTGAGCATAACCATTCATTTGATCCTGAGAGAGCACAAAACTCTAAATCACATAAGAGGATGGACAGTGGAGCCAAAAGAAAGGTTGAGCCAACTTTAGACGTTGAAGTAAGAACAATCAAATTATATCGAACGCCTGTTGTTGATTCATCAGGTTATAGAAGCTCAAATGCTAATGAAGAAGGAACTAAAGACCATGCTAATTTTTCTAGGCACTTGAGACTTAGAAAAGGAGATGCAGAAGTTATTGCAAAGTACTTCTGCCACAAACAACTGATGAATCCTAATTTTTTCTATGTCATGGACCTGACTGATGATGGACGTATGAGGAACATCTTTTGGATTGATTCAAGATCAAGGGCTGCATATGGTTACTTTGGTGATGTGGTTGCATTTGACTCATCATGTTTGTCAAACAATTATGAGACTCCGCTGGTTGCTTTTGTTGGTGTCAACCACCATGGGCACTCTATTTTATTTGGATGTGGTCTACTTGCTGATGAGTCATTTGAAACTTACATTTGGTTATTTAGGGCATGGCTTTCATGTATGTCTGGTCGCCCTCCACAAACTATCATTACAAATCAGTGTAAAACCATGCAAAGTGCAATAACTGAGGTTTTCCCTAGAGCCCACCATGGAATTTGTCCGTCACAAGTCATGCAAAGCATTCTTGGAGACTTGGCTCTGTCGCATGAATATGATGCATTTCAGATGGCATTGACTAAAGTGATATATGAATCTAAAACAGTTGATGAATTTGAGAGGGCTTGGGAGGAATGGACTCAACATTTTGGAATAAGCAATCAAGAGAAGCTCCAATTGCTACACGAAGAACGGGAGCGTTGGGCCCCAGTTTATTCCAGGGACACATTTTTTGCCGGAATTTTTGACTATGAAAAGGATGAGGCCTTGAGTCCCTTTTTCTATGGTCGTGTGCATCAACAAACTTCCTTGAAAGAATTTTTTGACATTTTTGACTTAGTTTTACAAGAGAAGCATGAAAAAGAAGGTCTTGCTGATTTAGAGTCGAGAGATTCAACACCCTTACTGAAAACAAGATGTTACTATGAGTTGCAGCTCTCAAAACTGTACACAAATGCAGTATTCAGTAAGTTCCAAGACGAAGTGATGATGATGTCTTTTTGTTTCAGCATCTCAGAGTTTCAAACAAATGGGTCTTTAGTGACGTACATAGTTAAAGAACACGTGGAGGAAGAATCAGTGAGGGATGTCAGGCAATATGAAGTCATGTATGATAAAGCAGGAGCAGAAGTTCGCTGTGGCTGTAACTGCTTTAACTTCAAAGGCTATCTATGCCGGCACGCCTTGTGTATCCTTAATTACAATGGTGTGGAGGAAATTCCATGTCAGTATATTTTGTCGAGATGGAAGAAGGATTATAAGAGATTGTATGTACCAAATCTCAGCTCCAATAATGTTGATATCACCAACCCTGTTCAGTGTTATGATCATTTGTACAGACGGGCTATGCAAGTTGTTGAGGAAGGAATGGTATCTCAAGATCATTATATGGTTGCTTGGCAGGCATTTAAAGAGTCCTTGAACAAGGTCCGCCTTGCAGCAGCAGACAAGATTGAATAA 2103 0.4047 MTGDTSYSAANKSLSPSHNLDITIEEGSPNSEYFVDAKNEWSELEIDADDLESGRDETEIVDCHNGESQVKDYPPPVVRMEFDTYDDAYNYYNSYAKELGFAIRVKSSWTKRNSKEKRGAVLCCNCEGFKTVKEVNSRRKETRTGCLAMIRLRLVESNRWRVDEVKLEHNHSFDPERAQNSKSHKRMDSGAKRKVEPTLDVEVRTIKLYRTPVVDSSGYRSSNANEEGTKDHANFSRHLRLRKGDAEVIAKYFCHKQLMNPNFFYVMDLTDDGRMRNIFWIDSRSRAAYGYFGDVVAFDSSCLSNNYETPLVAFVGVNHHGHSILFGCGLLADESFETYIWLFRAWLSCMSGRPPQTIITNQCKTMQSAITEVFPRAHHGICPSQVMQSILGDLALSHEYDAFQMALTKVIYESKTVDEFERAWEEWTQHFGISNQEKLQLLHEERERWAPVYSRDTFFAGIFDYEKDEALSPFFYGRVHQQTSLKEFFDIFDLVLQEKHEKEGLADLESRDSTPLLKTRCYYELQLSKLYTNAVFSKFQDEVMMMSFCFSISEFQTNGSLVTYIVKEHVEEESVRDVRQYEVMYDKAGAEVRCGCNCFNFKGYLCRHALCILNYNGVEEIPCQYILSRWKKDYKRLYVPNLSSNNVDITNPVQCYDHLYRRAMQVVEEGMVSQDHYMVAWQAFKESLNKVRLAAADKIE 700
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1806 700 SMART 26again6 592 619 IPR006564 GO:0008270
Prci12g1806 700 MobiDBLite consensus disorder prediction 1 22 - -
Prci12g1806 700 MobiDBLite consensus disorder prediction 171 194 - -
Prci12g1806 700 Pfam MULE transposase domain 295 388 IPR018289 -
Prci12g1806 700 Pfam FAR1 DNA-binding domain 90 174 IPR004330 -
Prci12g1806 700 ProSiteProfiles Zinc finger SWIM-type profile. 581 617 IPR007527 GO:0008270
Prci12g1806 700 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 67 692 IPR031052 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1806 Prci-Chr12 35864300 35867716 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Prci12g1806 MULE 3e-24 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1806 K17604 - gmx:100796448 1115.14