Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1797 ATGGGTGGTGCTCTGTTGTCGGAGCTTGCGACGGAGATAGCGATCCCGGTGTGTGCTATTGTGGGGATCGTTTTCTCGTTGGTGCAGTGGTTCCTTGTTTCTCGTGTAAAGCTCACTCCTGAGCGTCACGGACCGTCGTCGTCTCCGAGTAACAAGAATGGGTACGGCGACTACTTGATTGAAGAAGAGGAAGGTATCAATGACCACAATGTCGTCATGAAATGCGCTGATATTCAGAATGCCTTCTCTGAAGGTGCTACATCCTTTCTATTTACTGAATATCAATATGTGGGAGTCTTCATGGCTGCTTTTGCAATCCTGATCTTCCTTTTCCTGGGTTCTGTTGAGAGCTTCAGCACCAAGAGCCAGCCTTGCACATATGATAAGGAGAGGATGTGCAAGCCAGCACTTGCAACTGCAATATTCAGCACCGTGTCTTTCTTGCTTGGTGCTATCACTTCAGTCCTTTCTGGTTACCTTGGGATGAAGATAGCTACCTATGCTAATGCAAGGACAACATTGGAGGCAAGAAAGGGTGTTGGTAAAGCTTTTATTGCTGCATTTAGGTCTGGTGCGGTGATGGGTTTCCTTCTTGCAGCAAATGGTCTTTTGGTGCTCTACATAGCTATCAATCTTTTCAAGCTATATTATGGTGATGATTGGGAAGGCCTTTTTGAGGCTATTACTGGTTATGGTTTGGGTGGATCTTCCATGGCTCTGTTTGGTAGAGTTGGTGGGGGTATCTATACCAAGGCTGCTGATGTTGGTGCTGATCTAGTCGGAAAAGTTGAGCGGAATATTCCAGAGGATGACCCAAGAAACCCAGCTGTGATTGCTGACAATGTTGGTGATAATGTTGGAGATATTGCTGGAATGGGTTCTGATTTGTTTGGATCATATGCAGAATCATCCTGTGCTGCTCTGGTTGTTGCTTCCATATCTTCATTTGGGGTCAACCATGAGCTTACAGCAATGTTATATCCCTTGCTTATTAGTTCTATGGGAATTCTTGTCTGTTTGCTCTCTACTCTCTTTGCTACTGACTTTTTTGAGATCAAGGCTGTTAAGGAAATTGAACCAGCATTGAAGAGGCAACTTATCATCTCCACAGTTCTTATGACCATTGGAATTGCAATTGTTTCCTGGATAGCTCTGCCATCATCCTTCACAATTTTCAACTTCGGAGCTCAAAAAGTTGTAAAGAGCTGGCAGTTGTTCCTATGTGTTGGGGTTGGCCTCTGGGCTGGACTTATTATTGGATTTGTGACTGAGTATTATACTAGCAATGCTTACAGCCCTGTACAAGATGTAGCTGATTCTTGCCGGACTGGAGCTGCAACTAACGTTATCTTTGGCCTTGCCCTGGGATACAAATCTGTTATCATTCCTATTTTTGCTATTGCAGTCAGCATTTTTGTTAGTTTTAGTTTTGCTGCAATGTATGGCATTGCTGTGGCTGCCCTTGGGATGCTGAGCACCATTGCTACTGGGTTGGCTATTGATGCTTATGGGCCCATCAGTGACAATGCTGGCGGTATTGCTGAGATGGCGGGCATGAGCCACCGTATCCGTGAGAGAACTGATGCCCTTGATGCTGCTGGCAACACAACTGCTGCCATTGGAAAGGGCTTTGCCATTGGATCTGCTGCATTAGTGTCTTTGGCCCTATTTGGTGCCTTTGTGAGCCGAGCTGCAATCTCAACTGTAGATGTCTTGACCCCTAAGGTCTTCATTGGACTCCTAGTTGGTGCCATGCTTCCCTACTGGTTCTCTGCCATGACCATGAAGAGTGTGGGAAGTGCTGCCTTGAAGATGGTTGAGGAGGTTCGCAGGCAATTCAACACCATTCCCGGCATCATCGAGGGCCATTCCAAGCCTGATTATGCTACTTGTGTCAAAATCTCTACTGATGCATCCATCAAAGAGATGATTCCTCCTGGTGCCCTTGTCATGCTCACCCCACTCATCGTTGGCACATTTTTCGGTGTTGAAACTCTCTCAGGTGTTCTTGCTGGCTCTCTAGTGTCCGGTGTTCAGATCGCAATATCAGCATCCAACACTGGGGGTGCTTGGGACAACGCTAAGAAGTACATTGAGGCTGGTGCATCTGAGCATGCGAGGACCTTGGGGCCAAAGGGATCTGATCCACACAAAGCGGCTGTGATCGGTGACACAATCGGAGATCCTCTCAAGGACACTTCTGGCCCGTCGCTCAACATCCTGATAAAGCTCATGGCAGTGGAGTCGCTGGTGTTTGCTCCATTTTTTGCCACGCATGGTGGTTTACTTTTTAAGATCTTTTAA 2304 0.467 MGGALLSELATEIAIPVCAIVGIVFSLVQWFLVSRVKLTPERHGPSSSPSNKNGYGDYLIEEEEGINDHNVVMKCADIQNAFSEGATSFLFTEYQYVGVFMAAFAILIFLFLGSVESFSTKSQPCTYDKERMCKPALATAIFSTVSFLLGAITSVLSGYLGMKIATYANARTTLEARKGVGKAFIAAFRSGAVMGFLLAANGLLVLYIAINLFKLYYGDDWEGLFEAITGYGLGGSSMALFGRVGGGIYTKAADVGADLVGKVERNIPEDDPRNPAVIADNVGDNVGDIAGMGSDLFGSYAESSCAALVVASISSFGVNHELTAMLYPLLISSMGILVCLLSTLFATDFFEIKAVKEIEPALKRQLIISTVLMTIGIAIVSWIALPSSFTIFNFGAQKVVKSWQLFLCVGVGLWAGLIIGFVTEYYTSNAYSPVQDVADSCRTGAATNVIFGLALGYKSVIIPIFAIAVSIFVSFSFAAMYGIAVAALGMLSTIATGLAIDAYGPISDNAGGIAEMAGMSHRIRERTDALDAAGNTTAAIGKGFAIGSAALVSLALFGAFVSRAAISTVDVLTPKVFIGLLVGAMLPYWFSAMTMKSVGSAALKMVEEVRRQFNTIPGIIEGHSKPDYATCVKISTDASIKEMIPPGALVMLTPLIVGTFFGVETLSGVLAGSLVSGVQIAISASNTGGAWDNAKKYIEAGASEHARTLGPKGSDPHKAAVIGDTIGDPLKDTSGPSLNILIKLMAVESLVFAPFFATHGGLLFKIF 767
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1797 767 Hamap Putative K(+)-stimulated pyrophosphate-energized sodium pump [hppA]. 9 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Prci12g1797 767 Pfam Inorganic H+ pyrophosphatase 43 752 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Prci12g1797 767 PANTHER K(+)-INSENSITIVE PYROPHOSPHATE-ENERGIZED PROTON PUMP 6 757 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Prci12g1797 767 NCBIfam V-type H(+)-translocating pyrophosphatase 10 762 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
Prci12g1797 767 PIRSF H+-PPtase 9 765 IPR004131 GO:0004427|GO:0009678|GO:0016020|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1797 Prci-Chr12 35744467 35749316 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1797 4 630 Primary Pumps ATPases AT1G15690 87.281 0.0 1116
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1797 K23025 - gmx:100803691 1422.53