Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1744 ATGCAGATTATCGAGCAGTTTGTAATATGTAAAGCATATTTGAGATGGACGTCAATAATAAGAAAGGAAATAGGTGACGATGAACAACTTGTCTGCCATCAAAGTGATCAACAACAGAGTTTCCCTGTTTTCTGTCATCAGCCAAGCACTTCAGTGCAGAACCTTCATGACTTAATAACCTTCTCTCCTATCACATTCAATAATCTTGTGTCGTTTGATGACTACGATGTTGGAAGTGTACCAAGTACTGTGCAAAAAGCTTGTACGAAACAAGAATCTGGTCGTGATTCGGTGAATCAGTTTGGGAGTAGAATTAGCAGGAACCGAGGAACAAGGAAGGGTAGGAACTCCAAAACTGGGACATTGGATCACGTTATTGCTGAGAGAAACCGAAGACATGAATTGGCTGAGAAATTTCTTGCTCTTTCAGCTACAATTCCTGGCTTGAAAAAGTGA 456 0.4035 MQIIEQFVICKAYLRWTSIIRKEIGDDEQLVCHQSDQQQSFPVFCHQPSTSVQNLHDLITFSPITFNNLVSFDDYDVGSVPSTVQKACTKQESGRDSVNQFGSRISRNRGTRKGRNSKTGTLDHVIAERNRRHELAEKFLALSATIPGLKK 151
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1744 151 PANTHER BHLH TRANSCRIPTION FACTOR 41 151 - -
Prci12g1744 151 MobiDBLite consensus disorder prediction 96 119 - -
Prci12g1744 151 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 119 151 IPR011598 GO:0046983
Prci12g1744 151 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 121 149 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1744 Prci-Chr12 35126733 35129749 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1744 109 151 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22760 52.083 8.26e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1744 - - pcin:129287877 307.375