Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1743 ATGGAGAGTTCCTTCTGGGAGACATGCCTTCCTTATCTGGAAATAGGTGACGATGAACAACTTGTCTGCCATCAAAGTGATCAACAACAGAGTTTCCCTGTTTTCTGTCATCAGCCAAGCACTTCAGTGCAGAACCTTCATGACTTAATAACCTTCTCTCCTATCACATTCAATAATCTTGTGTCGTTTGATGACTACGATGTTGGAAGTGTACCAAGTACTGTGCAAAAAGCTTGTACGAAACAAGAATCTGGTCGTGATTCGGTGAATCAGTTTGGGAGTAGAATTAGCAGGAACCGAGGAACAAGGAAGGGTAGGAACTCCAAAACTGGGACATTGGATCACGTTATTGCTGAGAGAAACCGAAGACATGAATTGGCTGAGAAATTTCTTGCTCTTTCAGCTACAATTCCTGGCTTGAAAAAGATGCGTGACGAATATGGCATGACAGTGGATGATCTAGTGAAGAACTTGAGACGAGATCTGTTCAAGTTACGTGAGGATGCATGGGCTTGA 516 0.4302 MESSFWETCLPYLEIGDDEQLVCHQSDQQQSFPVFCHQPSTSVQNLHDLITFSPITFNNLVSFDDYDVGSVPSTVQKACTKQESGRDSVNQFGSRISRNRGTRKGRNSKTGTLDHVIAERNRRHELAEKFLALSATIPGLKKMRDEYGMTVDDLVKNLRRDLFKLREDAWA 171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1743 171 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 106 145 IPR036638 GO:0046983
Prci12g1743 171 PANTHER BHLH TRANSCRIPTION FACTOR 36 143 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1743 Prci-Chr12 35118844 35128109 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1743 100 159 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 41.270 1.33e-09 53.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1743 - - pcin:129287877 322.398