Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1742 ATGCAGATTATCGAGCAGTTTGTAATATGTAAAGCATATTTGAGATGGACGTCAATAATAAGAAAGGAAATAGGTGACGATGAACAACTTGTCTGCCATCAAAGTGATCAACAACAGAGTTTCCCTGTTTTCTGTCATCAGCCAAGCACTTCAGTGCAGAACCTTCATGACTTAATAACCTTCTCTCCTATCACATTCAATAATCTTGTGTCGTTTGATGACTACGATGTTGGAAGTGTACCAAGTACTGTGCAAAAAGCTTGTACGAAACAAGAATCTGGTCGTGATTCGGTGAATCAGTTTGGGAGTAGAATTAGCAGGAACCGAGGAACAAGGAAGGGTAGGAACTCCAAAACTGGGACATTGGATCACGTTATTGCTGAGAGAAACCGAAGACATGAATTGGCTGAGAAATTTCTTGCTCTTTCAGCTACAATTCCTGGCTTGAAAAAGATGCGTGACGAATATGGCATGACAGTGGATGATCTAGTGAAGAACTTGAGACGAGATCTGTTCAAGTTACGTGAGGATGCATGGGCTTGA 543 0.4125 MQIIEQFVICKAYLRWTSIIRKEIGDDEQLVCHQSDQQQSFPVFCHQPSTSVQNLHDLITFSPITFNNLVSFDDYDVGSVPSTVQKACTKQESGRDSVNQFGSRISRNRGTRKGRNSKTGTLDHVIAERNRRHELAEKFLALSATIPGLKKMRDEYGMTVDDLVKNLRRDLFKLREDAWA 180
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1742 180 PANTHER BHLH TRANSCRIPTION FACTOR 41 152 - -
Prci12g1742 180 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 115 153 IPR036638 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1742 Prci-Chr12 35118844 35129749 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1742 109 168 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22750 41.270 2.18e-09 53.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1742 - - pcin:129287877 366.311