Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1741 ATGTTGCAGGATATGGATGATTCTGAAGACTTCCACGACCAAGTTTGTCACATGATGATGTCTTTTGACGAGGAAGACGAAGAGTTTCTCAGAAACATAATGCACCAGCAGCAGCAGCAGCAGCCAGCTGGTAATAATAATAACAATGATGAGAATAAGAATCAGTACTTGTGCTCTTATCTAAGCGAAGAGAAATCCTTTGCCACCGTGGATCTCTCTACTGACAGCTCCGGCAACCGTCGTGGTGGTCGTTCGAATGATAAGAAACACGTGGACGGGTCTGCTAAATCATACATTTTATCATTCGATCAGTCCAACGTAATGCCAGCAGAAGCAATCTCATCGAAACAAGAAGAATCTAGTACCTCAGAACTTTGTTCATTAAAAAGGATCAGAGCGACCACGTCGTGTAATGTTGAACCCAGAAAGAAGACTAGAAGCTGTTCGGAGACTGCAAATCATATAATGGCGGAGAGGAGGAGAAGACAGCAACTCACCGAGAGATTCATTGCACTTTCAGCAACTATTCCCGGCTTGAAGAAGATGGACAAAGCCACGATTCTTCAAGAAGCTACAAGATATGTGAAACAGCTTCAAGAACGAGTAACGGAGCTAGAGAAACAGAATAGCATCATCAACACATCAGAGTCATCAATGATATCGATCAAAAAATGTGAGCTACATAGAATTAATGATGATTTATGTGAAGCAAATGAAGTTTTGCCTCAGATTGATGCAAAAGTGTTGGAGAATCAAGTGCTATTTGGAATCTTTTGTGAGAAGCAGAAGGGCATTGAGTTTAAAATATTGACTTTGCTTGAGAATTTTCATCTTCATGTCACTAGTAGCAGCGTCTTGCCCTTTGGGAATTCCACTCTTGGCATCACCATCATTGCCCAGATGGGGGAGGAATACAGAATGACAGTGAATGAAGTGATGAAAAAGCTACGACAAGTTCTGTCAAAGTCGCACGAAGTTGATCCGTACTAG 990 0.4182 MLQDMDDSEDFHDQVCHMMMSFDEEDEEFLRNIMHQQQQQQPAGNNNNNDENKNQYLCSYLSEEKSFATVDLSTDSSGNRRGGRSNDKKHVDGSAKSYILSFDQSNVMPAEAISSKQEESSTSELCSLKRIRATTSCNVEPRKKTRSCSETANHIMAERRRRQQLTERFIALSATIPGLKKMDKATILQEATRYVKQLQERVTELEKQNSIINTSESSMISIKKCELHRINDDLCEANEVLPQIDAKVLENQVLFGIFCEKQKGIEFKILTLLENFHLHVTSSSVLPFGNSTLGITIIAQMGEEYRMTVNEVMKKLRQVLSKSHEVDPY 329
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1741 329 MobiDBLite consensus disorder prediction 71 92 - -
Prci12g1741 329 Pfam Helix-loop-helix DNA-binding domain 152 199 IPR011598 GO:0046983
Prci12g1741 329 Coils Coil 188 215 - -
Prci12g1741 329 Gene3D - 140 214 IPR036638 GO:0046983
Prci12g1741 329 PANTHER BHLH TRANSCRIPTION FACTOR 19 322 - -
Prci12g1741 329 SMART finulus 155 204 IPR011598 GO:0046983
Prci12g1741 329 SUPERFAMILY HLH, helix-loop-helix DNA-binding domain 152 214 IPR036638 GO:0046983
Prci12g1741 329 ProSiteProfiles Myc-type, basic helix-loop-helix (bHLH) domain profile. 149 198 IPR011598 GO:0046983
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1741 Prci-Chr12 35088630 35091464 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1741 154 321 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G22770 40.642 1.16e-41 145
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF bHLH Prci12g1741 HLH 3.5e-11 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1741 - - pcin:129287632 627.476