Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1731 ATGGATCCAAATGAAAGTAGAGTGTGCTCGTGTAGCCTGGGTGCTTCTTCGAGTCTGAGTCTTGCTTGCGAGGACCTGGAAATGGCAGGTGCAGCTACGAAGGTTTGCGTGACTGGTGCTGGAGGCTTTATCGCGTCTTGGCTCGTTAAGCTTCTTCTTTCCAAGGGCTATTTTGTTCACGGCACCGTCAGAGAACCTGGTAATCAGAAGTACGATCACTTGCTTAAATTCGAGGGAGCTTCTGGGAACCTTAAGTTCTTCAAGGCTGACCTCTTAGATTACGAGTCTCTTTCTTCGGCGATTGCTGGATGCAGAGCAGTTTTCCATGTTGCTTGTCCTGTGCCCTCCACAATTGTACCCAATCCTGAGGTAGAAGTTATTGAGCCTTCTGTGAAGGGCACTGCTAATGTCCTCAAAGCTTGTCTTGAAGCAAAAGTGGAACGGGTTGTCTTTGTATCCAGTCAAGGCGCTGTTTCCAGGAACCCCAACTTGCCCAAGGATGGAGTAATTGATGAGTCCTGTTGGTCTGATAAAGATTGGTGCAGAAGAACTAAGAACTGGTATTGTTATTCCAAGACAGAGGCAGAGATGCAGGCCTTGGAATTTGCCAGAAACACAGGGCTTCCAGTGGTAACTATTTGTCCTACCCTGGTGTTGGGGCCAATTTTACAGTCAACCACTGTCAATGCAAGTAGTTTGGTTCTCCTCAAACTATGTAAAGGTCCTGAGTCACTGGAGAATAAACATCGGTGGATAGTAGATGTGCGTGATGTAGCCGATGCAACACTAATGGCTTATGAGAAGCCTGAAGCAGAAGGGAGATACATATGCACTGCACATTCTATCAACACAGATGAATTGGTGGAGAAATTAAGACGATTATATCCTAACTATAGCTACCCTAAAAGCTTTATTGAAGTAGATGATCGCATAAGGTTAAGCTCAGAGAAACTGCAGAGGTTGGGTTGGAGATACAGGCCACTGGAAGAAACACTAGTTGATTCTGTTGAGAGCTATAAGGCCGCAGGGCTTCTGGAATCAAAATAA 1047 0.4575 MDPNESRVCSCSLGASSSLSLACEDLEMAGAATKVCVTGAGGFIASWLVKLLLSKGYFVHGTVREPGNQKYDHLLKFEGASGNLKFFKADLLDYESLSSAIAGCRAVFHVACPVPSTIVPNPEVEVIEPSVKGTANVLKACLEAKVERVVFVSSQGAVSRNPNLPKDGVIDESCWSDKDWCRRTKNWYCYSKTEAEMQALEFARNTGLPVVTICPTLVLGPILQSTTVNASSLVLLKLCKGPESLENKHRWIVDVRDVADATLMAYEKPEAEGRYICTAHSINTDELVEKLRRLYPNYSYPKSFIEVDDRIRLSSEKLQRLGWRYRPLEETLVDSVESYKAAGLLESK 348
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1731 348 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 34 336 - -
Prci12g1731 348 Pfam NAD dependent epimerase/dehydratase family 35 272 IPR001509 -
Prci12g1731 348 CDD FR_SDR_e 35 323 - -
Prci12g1731 348 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 34 340 IPR036291 -
Prci12g1731 348 Gene3D - 27 348 - -
Prci12g1731 348 FunFam NAD(P)-binding Rossmann-fold superfamily protein 28 346 - -
Prci12g1731 348 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 23 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1731 Prci-Chr12 35004947 35007629 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1731 34 346 Monolignol Biosynthesis Gene Families AT2G33590 64.013 8.10e-149 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1731 - - pcin:129287473 677.167