Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1730 ATGGCAAGTGTAGCTACGAAGGTTTGCGTAACTGGTGCTGGAGGCTTTGTGGCGTCTTGGCTCGTTAAGCTTCTTCTTTCCAAGGGCTATTTTGTTCATGGCACCGTTAGAGAACCTGGTAATCACAAGTACGATCACTTACTTAAATTCGAGGGTGCTTCTGAGAACCTAAAGCTCTTCAAGGCTGAACTCTTAGATTACGAGTCTCTTTCTTCGGCAATTGTTGGATGTAGAGCAGTTTTCCATGTTGCTTGTCCTGTGCCCTCTACAACTGTAGCCAATCCTGAGGTTGAAATGATTGAACCTTCTGTGAAAGGCACTACTAATGTCCTCAAAGCTTGTCTTGAAGCAAAAGTGGAACGGGTTGTCTTTGTATCTTCTCAAGTTGCTGTTTCCGTGAACCCCAACTTGTCCAAGGATGAAGTAATCGATGAGTCCTGTTGGTCTGATAAAGAGTACTGCAGAAGAACTAAGAACTGGTATTGCTATGCCAAAGCAGAGGCAGAGTTGCAGGCTCTGGACTTTGCCAGGAATACTGGGCTTGCAGTGGTTAGTATTTGTCCTACCATAGTGTTGGGGCCTATTTTACAGTCAACCACTGTCAATGCAAGTAGCTTGATTCTCCTCAAACTATTTAAAGATGCTGAGTCGCTGGAGAATAAGCAACGGTGGATAGTAGATGTTCGGGATGTAGCTGATGCAATATTAATGGCTTATGAAAAGCCTGAAGCAGAGGGGAGATACTTATGCACTGCACATTCTATCAACACAGACGACTTGGTGGAGAAATTAAGGCGTTTATATCCAAACTATAGCTACCCTAAAAGCTTTATTGAAGTAGATGATCGCATAAAGTTAAGCTCAGAGAAACTGCAGAGGTTGGGTTGGAGATACAGGCCACTGGAAGAAACACTAGTTGATTCTGTTGAGAGCTATAAGGCCGCAGGGCTTCTGGAATGA 960 0.4396 MASVATKVCVTGAGGFVASWLVKLLLSKGYFVHGTVREPGNHKYDHLLKFEGASENLKLFKAELLDYESLSSAIVGCRAVFHVACPVPSTTVANPEVEMIEPSVKGTTNVLKACLEAKVERVVFVSSQVAVSVNPNLSKDEVIDESCWSDKEYCRRTKNWYCYAKAEAELQALDFARNTGLAVVSICPTIVLGPILQSTTVNASSLILLKLFKDAESLENKQRWIVDVRDVADAILMAYEKPEAEGRYLCTAHSINTDDLVEKLRRLYPNYSYPKSFIEVDDRIKLSSEKLQRLGWRYRPLEETLVDSVESYKAAGLLE 319
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1730 319 Pfam NAD dependent epimerase/dehydratase family 8 245 IPR001509 -
Prci12g1730 319 Gene3D - 2 319 - -
Prci12g1730 319 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 7 309 - -
Prci12g1730 319 FunFam NAD(P)-binding Rossmann-fold superfamily protein 1 319 - -
Prci12g1730 319 CDD FR_SDR_e 8 296 - -
Prci12g1730 319 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 7 313 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1730 Prci-Chr12 35001336 35004154 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1730 7 319 Monolignol Biosynthesis Gene Families AT2G33590 65.287 1.19e-150 424
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1730 - - pcin:129287473 551.592