Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1724 ATGAATAATTTTCTTCTTCTGTTCCTACTCATTTGGGTATCAAGCTTTTCCCCTTCAGTTTCTCATTTTTTTGCAAATGCTGAAGCTCAATCTCCAGGTATAGCGGAGGTTAGAGAAGGCCATCACCAGAATTTGAACAAGAGAATTCTAATAGCACTTATTGTTTGTTCTGCTCTTCTTGTTTCAATCTTCCTAATTTTAACATATATCTGGTTTCATCGACACAAAATCTTCAAAGTCCCCAGTTCTAAAAGCACCGAGAATATCGAAGCTGCAAAAGGGGCGTCACTTAGCCCTATTGATGTTAAATTTAATTACTCAAAAATGGTAGACAAGAAGAGTTCAATTGCTATATTTGACTTCGAGTTGTTAGAGGTTGCAACAAACAACTTTGCCAATAGTAATATTCTGGGTGAGAGTGGTTCTAGGCTAGTTTACAGGGCTTGTTTTGATGAGCATCTCAAGGCAGCTGTGAAGAAAGCAGATAGCACTGCTGATAGAGAATTTGAGAATGAAGTGAATTGGTTAAGTAAGATTCGACATCAGAATATCATAAAACTTCTTGGTTACTGTATTCACGGTGAATCAAGGTTTCTTGTATATGAAATGATGGAGAATGGATCTTTGGAAACTCAATTACATGGGCCCAATCATGGATCATCTTTAAATTGGTGTCTCCGGTTAAGAATTGCTGTTGATGTCGCCAGAGCATTAGAATATCTCCATGAGCACTCTAATCCTCCTGTGGTTCATAGAGACCTAAAATCTTCTAATGTTCTTCTGGATTCTCGTTTTAATGCCAAGCTATCAGATTTTGGGCTTGCTGTAAGTTCTGGAATGCAAGACAAGAACATAAAGATGTCAGGAACTTTGGGTTATGTAGCACCTGAGTACATATCACACGGTAGGCTAACTGATAAGAGTGATGTATATGCTTTTGGGGTTATCCTTCTTGAGCTTCTAACAGGAAGAAAAGCCATGGACAATATGTCCTCAGACCAATACCAATCCATTGTCACATGGGCCATGCCTCAGCTAACTGACAGAACAAAACTTTCAAGTATTATAGATCCTGTAATCAGAAACACAATGGATTTGAAGCATTTATATCAGGTTGCTGCAGTGGCTGTACTTTGTGTTCAACCAGAACCAAGTTATCGGCCGCTAATTACTGATGTCCTGCACTCTCTTATCCCTTTGGTACCTACAGAACTGGGAGGGTCACTCAGAGTTTCAGAATCAGTCTGCCCTGAGAATTTGGGTTGA 1266 0.3926 MNNFLLLFLLIWVSSFSPSVSHFFANAEAQSPGIAEVREGHHQNLNKRILIALIVCSALLVSIFLILTYIWFHRHKIFKVPSSKSTENIEAAKGASLSPIDVKFNYSKMVDKKSSIAIFDFELLEVATNNFANSNILGESGSRLVYRACFDEHLKAAVKKADSTADREFENEVNWLSKIRHQNIIKLLGYCIHGESRFLVYEMMENGSLETQLHGPNHGSSLNWCLRLRIAVDVARALEYLHEHSNPPVVHRDLKSSNVLLDSRFNAKLSDFGLAVSSGMQDKNIKMSGTLGYVAPEYISHGRLTDKSDVYAFGVILLELLTGRKAMDNMSSDQYQSIVTWAMPQLTDRTKLSSIIDPVIRNTMDLKHLYQVAAVAVLCVQPEPSYRPLITDVLHSLIPLVPTELGGSLRVSESVCPENLG 421
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1724 421 Gene3D Transferase(Phosphotransferase) domain 1 204 404 - -
Prci12g1724 421 PANTHER OS01G0750732 PROTEIN 25 401 - -
Prci12g1724 421 ProSiteProfiles Protein kinase domain profile. 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1724 421 SMART serkin_6 131 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1724 421 ProSitePatterns Serine/Threonine protein kinases active-site signature. 249 261 IPR008271 GO:0004672|GO:0006468
Prci12g1724 421 FunFam probable receptor-like protein kinase At1g80640 204 402 - -
Prci12g1724 421 SUPERFAMILY Protein kinase-like (PK-like) 109 397 IPR011009 -
Prci12g1724 421 Gene3D Phosphorylase Kinase; domain 1 97 203 - -
Prci12g1724 421 Pfam Protein kinase domain 134 395 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1724 Prci-Chr12 34973687 34978064 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1724 10 343 Receptor kinase-like Gene Family AT1G80640 47.059 6.36e-102 305
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-X Prci12g1724 Pkinase 1.1e-42 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1724 - - gmx:100811491 639.417