Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1721 ATGGCAGGAGGCAGCCTCGAAGAGATCAAGAAGGAGAATGTCGACCTCGAGCGAATACCGATAGATGAAGTGTTCAGAGAATTGAACTGTACAAAAGAGGGTTTGACGAGTGAGGAGGGGCAAAAGAGAATCGCAGTTTTTGGGCTCAACAAGCTAGAAGAGAAGAAGGAAAGCAAGTTTCTTAAATTCCTGGGCTTCATGTGGAATCCTCTCTCATGGGTCATGGAAGCAGCTGCTATCATGGCTATCGTTTTGGCCAATGGAGGGGGCCAACCACCAGATTGGCAAGATTTCGTAGGAATTGTGGCATTGCTCATCATAAACTCCACTATTAGTTTCATAGAAGAAAACAATGCAGGTAATGCTGCTGCAGCACTTATGGCAAGCCTTGCATTGAAAACTAAGGTTTTAAGGGATGGAAGGTGGACTGAACAGGATGCATCTGTGTTGGTACCTGGAGATGTAATCAGCATCAAGTTAGGAGACATTATTCCCGCAGATGCTCGTCTCTTAGAAGGAGACCCTCTGAAGATTGACCAGTCTGCACTTACAGGTGAGTCTTTGCCGGTTACGAAGAACCCATCTGACGAAATCTTCTCGGGGTCGACCGTGAAGCAAGGAGAGATTGAGGCTATTGTGATTGCTACTGGAGTACACACCTTCTTTGGAAAAGCTGCTCACTTGGTTGATAGCACTAACCAAGTAGGGCACTTTCAAAAGGTATTAAATTTTCTTTCTCTGTTGATGAATTGGGATTGCTGCTACTTTTTTTGTGGCCAGGTGTTGACGGCCATTGGAAACTTCTGCATTTGTACAATAGCAATTGGGATTATTATAGAGATTGTAGTGATGTACCCAATACAACATCGCAAGTATAGGAGTGGAATTGACAACCTCTTGGTGCTTCTTATCGGAGGGATTCCAATTGCCATGCCAACTGTCTTATCGGTAACGATGGCTATTGGTTCTCACAGGTTGTCACAACAAGGTGCTATCACTAAGAGGATGACAGCCATTGAGGAGTTGGCTGGGATGGATGTTCTATGCAGTGACAAGACTGGCACCCTCACACTCAACAAGCTCACAGTTGACAAGAGCTTGGTCGAGGTTTTTGTAAAAGATATAGACAAGGACACTTTAATATTGCTTGGAGCTAGAGCCTCAAGGGTGGAGAATCAAGATGCTATTGATGCTTGTATTGTTGGAATGTTGGGTGACCCGAAGGAGGCCAGAGATGGCATCACCGAGGTGCATTTTCTTCCCTTCAATCCAGTGGACAAGCGTACGGCCATAACATACATTGATTCTGCAGGCAATTGGCACAGAGTAAGCAAAGGAGCACCAGAACAGATTGTAGAACTTTGTCAACTCAAAGAAGATGTAAAGAAAAAAGTTCACTCCATTATTGATAAGTTTGCTGAACGTGGTTTGCGTTCTCTTGCCGTATCAAGACAGGAAGTTCCGGAAAAGACCAAGGAGAGTCCAGGAGCGCCATGGCAGTTTGTGGGTCTCTTACCACTCTTTGATCCTCCAAGGCATGACAGTGCAGAGACTATCAAACGTGCTCTTCATCTTGGAGTGAATGTGAAGATGATTACTGGTGATCAGCTAGCTATTGGAAAGGAGACTGGCCGTAGGCTTGGCATGGGAAGCAACATGTATCCTTCTTCCTCACTCCTTGGTGACAATAAGGATGAGTCTATTGCTACATTGCCAATTGACGAGCTCATTGAGCAGGCTGATGGCTTTGCTGGCGTCTTTCCGGAGCACAAATATGAGATAGTGAAGCGACTACAAGATAGGAAACACATATGTGGAATGACTGGAGATGGTGTGAATGATGCTCCTGCATTGAAAAAGGCAGACATTGGGATTGCAGTGGCTGATGCAACTGATGCAGCTCGAGGTGCATCTGACATAGTTTTGACAGAACCTGGTTTAAGTGTGATTATTAGCGCAGTGTTGACAAGCCGAGCCATTTTCCAAAGAATGAAGAACTACACCATCTATGCAGTTTCTATAACAATCCGAATTGTGCTGGGCTTTCTCTTACTTGCTCTTATCTGGAAATTTGATTTCTCACCTTTTATGGTTCTGATCATTGCCATACTAAATGATGGGACCATCATGACCATTTCTAAGGACAGGGTCAAGCCATCACCTACTCCAGATTCATGGAAACTCAATGAGATTTTCGCCACTGGAATAGTACTTGGATCCTACTTGGCTGTTATGACTGTCGTCTTCTTCTGGGCCGCTCATGCTTCAGATTTCTTCACAGAAAAATTCGGGGTGAAATCTATCAGAGAAAATGATAGAGCACTAACATCAGCCGTTTACCTTCAAGTGAGTATTGTGAGTCAGGCTCTCATCTTTGTTACTCGGTCAAGAAGCTGGTCTTACGTTGAACGCCCTGGTTTGTTGCTGATGGGAGCCTTTCTCATAGCACAATTGATCGCCACGATAATAGCGGTGTATGCAAACTGGGGATTTGCAGATATAGAAGGAATCGGATGGGGATGGGCAGGAGTAATATGGATTTACAGCATTATCTTCTACGTTCCTTTGGATTTTCTGAAATTCATAATCCGATATGCACTGAGTGGGAAGGCATGGAACAATATTACTGAGAACAGGACCGCTTTCACAACGAAGAAGGATTACGGGAGAGGCGAAAGAGAAGCTCAATGGGCCACAGCTCAACGTACCCTCCACGGGCTCAATCCTCCTCAAACAGAGCAAACCCTCAATGACATGAGCTCCTATGGCGAACTATCTGAACTCGCAGAACAAGCAAGGAAACGCGCTGAAGTTGCAAGGTTGAGGGAGCTTCACACGTTGAAGGGTCACGTGGAATCGGTGGTGAAACTGAAGGGGCTTGACATAGACACGATTCAGCAACACTACACAGTTTGA 2916 0.451 MAGGSLEEIKKENVDLERIPIDEVFRELNCTKEGLTSEEGQKRIAVFGLNKLEEKKESKFLKFLGFMWNPLSWVMEAAAIMAIVLANGGGQPPDWQDFVGIVALLIINSTISFIEENNAGNAAAALMASLALKTKVLRDGRWTEQDASVLVPGDVISIKLGDIIPADARLLEGDPLKIDQSALTGESLPVTKNPSDEIFSGSTVKQGEIEAIVIATGVHTFFGKAAHLVDSTNQVGHFQKVLNFLSLLMNWDCCYFFCGQVLTAIGNFCICTIAIGIIIEIVVMYPIQHRKYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSQQGAITKRMTAIEELAGMDVLCSDKTGTLTLNKLTVDKSLVEVFVKDIDKDTLILLGARASRVENQDAIDACIVGMLGDPKEARDGITEVHFLPFNPVDKRTAITYIDSAGNWHRVSKGAPEQIVELCQLKEDVKKKVHSIIDKFAERGLRSLAVSRQEVPEKTKESPGAPWQFVGLLPLFDPPRHDSAETIKRALHLGVNVKMITGDQLAIGKETGRRLGMGSNMYPSSSLLGDNKDESIATLPIDELIEQADGFAGVFPEHKYEIVKRLQDRKHICGMTGDGVNDAPALKKADIGIAVADATDAARGASDIVLTEPGLSVIISAVLTSRAIFQRMKNYTIYAVSITIRIVLGFLLLALIWKFDFSPFMVLIIAILNDGTIMTISKDRVKPSPTPDSWKLNEIFATGIVLGSYLAVMTVVFFWAAHASDFFTEKFGVKSIRENDRALTSAVYLQVSIVSQALIFVTRSRSWSYVERPGLLLMGAFLIAQLIATIIAVYANWGFADIEGIGWGWAGVIWIYSIIFYVPLDFLKFIIRYALSGKAWNNITENRTAFTTKKDYGRGEREAQWATAQRTLHGLNPPQTEQTLNDMSSYGELSELAEQARKRAEVARLRELHTLKGHVESVVKLKGLDIDTIQQHYTV 971
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1721 971 SUPERFAMILY Calcium ATPase, transmembrane domain M 14 867 IPR023298 -
Prci12g1721 971 NCBIfam plasma-membrane proton-efflux P-type ATPase 34 826 IPR006534 GO:0008553|GO:0016020|GO:0120029
Prci12g1721 971 FunFam Plasma membrane ATPase 501 656 - -
Prci12g1721 971 SUPERFAMILY HAD-like 345 655 IPR036412 -
Prci12g1721 971 FunFam Plasma membrane ATPase 361 508 - -
Prci12g1721 971 Gene3D - 132 216 - -
Prci12g1721 971 Gene3D - 361 508 IPR023299 GO:0000166
Prci12g1721 971 SMART Cation_ATPase_N_a_2 15 87 IPR004014 -
Prci12g1721 971 Pfam haloacid dehalogenase-like hydrolase 345 622 - -
Prci12g1721 971 Pfam Cation transporter/ATPase, N-terminus 19 81 IPR004014 -
Prci12g1721 971 PANTHER CALCIUM-TRANSPORTING ATPASE 18 903 - -
Prci12g1721 971 Gene3D - 920 971 - -
Prci12g1721 971 SFLD p-type atpase 331 659 IPR044492 -
Prci12g1721 971 PRINTS P-type cation-transporting ATPase superfamily signature 608 627 - -
Prci12g1721 971 PRINTS P-type cation-transporting ATPase superfamily signature 525 535 - -
Prci12g1721 971 PRINTS P-type cation-transporting ATPase superfamily signature 503 514 - -
Prci12g1721 971 PRINTS P-type cation-transporting ATPase superfamily signature 349 363 - -
Prci12g1721 971 PRINTS P-type cation-transporting ATPase superfamily signature 179 193 - -
Prci12g1721 971 PRINTS P-type cation-transporting ATPase superfamily signature 631 643 - -
Prci12g1721 971 ProSitePatterns E1-E2 ATPases phosphorylation site. 351 357 IPR018303 -
Prci12g1721 971 Pfam E1-E2 ATPase 132 328 - -
Prci12g1721 971 SFLD Haloacid Dehalogenase 331 659 - -
Prci12g1721 971 PRINTS H+-transporting ATPase (proton pump) signature 580 596 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 PRINTS H+-transporting ATPase (proton pump) signature 639 664 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 PRINTS H+-transporting ATPase (proton pump) signature 780 801 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 PRINTS H+-transporting ATPase (proton pump) signature 465 483 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 PRINTS H+-transporting ATPase (proton pump) signature 608 624 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 NCBIfam HAD-IC family P-type ATPase 101 227 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 NCBIfam HAD-IC family P-type ATPase 582 694 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Prci12g1721 971 FunFam ATPase 4 plasma membrane-type 593 835 - -
Prci12g1721 971 SUPERFAMILY Calcium ATPase, transduction domain A 133 229 IPR008250 -
Prci12g1721 971 Gene3D - 346 645 IPR023214 -
Prci12g1721 971 FunFam Plasma membrane ATPase 132 216 - -
Prci12g1721 971 CDD P-type_ATPase_H 34 861 IPR006534 GO:0008553|GO:0016020|GO:0120029
Prci12g1721 971 Gene3D - 94 835 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1721 Prci-Chr12 34947999 34952763 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1721 5 971 Primary Pumps ATPases AT3G42640 80.869 0.0 1601
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1721 K01535 - zju:107408630 1606.65