Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Prci12g1720 | ATGGGAAGAGGAAGACCCCAGCAACGGTATCGCGGTGTTCGCCAGAGGCATTGGGGCTCCTGGGTCTCCGAGATTCGGCACCCCACCTTGAAGACGAGAATATGGCTGGGGACATTTGAAACAGCAGAAGATGCTGCGAGAGCCTATGACGAAGCAGCCAGGCTTATGTGTGGCCCCAAAGCCATAACCAATCTCTCTCCTCCTCCTCCTCCTTCTTCCTCTCACTTTCTCTCTCCAACTTTAACAGCCAAGCTTCTTCACAAGTGCCACATGGCTCCCCTTTCCCTCCCGATGAAGAAGAAACACCAGTCCCAGCAACATCGTCCTCGTCATCATCAACCAGCTGAAGAAGAGGAATTACAGACGCAGACATCTGTTAATTATCCCTCCGCCGGCAATTCTGTCGCCCAACCGAGCTCTGACACCGGATTTTTCCGGTGGCCGGAGAATGCGAAACATGAGGAGGAAAGACTTCAGGTGGAAGTGCTTGAAGATGATGACATTGAGCAGATGATTCAAGAGTTACTTCATTATGGCTCTGTTGAGCTTTCTTCTTCTCCCTCTCCTTCGTTGAACCAACATTCATGA | 588 | 0.5102 | MGRGRPQQRYRGVRQRHWGSWVSEIRHPTLKTRIWLGTFETAEDAARAYDEAARLMCGPKAITNLSPPPPPSSSHFLSPTLTAKLLHKCHMAPLSLPMKKKHQSQQHRPRHHQPAEEEELQTQTSVNYPSAGNSVAQPSSDTGFFRWPENAKHEEERLQVEVLEDDDIEQMIQELLHYGSVELSSSPSPSLNQHS | 195 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Prci12g1720 | 195 | Gene3D | AP2/ERF domain | 8 | 66 | IPR036955 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | FunFam | Ethylene-responsive transcription factor 2 | 8 | 67 | - | - | |
Prci12g1720 | 195 | SUPERFAMILY | DNA-binding domain | 9 | 66 | IPR016177 | GO:0003677 | |
Prci12g1720 | 195 | PANTHER | DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C | 8 | 167 | - | - | |
Prci12g1720 | 195 | PRINTS | Ethylene responsive element binding protein signature | 10 | 21 | IPR001471 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | PRINTS | Ethylene responsive element binding protein signature | 32 | 48 | IPR001471 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | SMART | rav1_2 | 9 | 72 | IPR001471 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | Pfam | AP2 domain | 9 | 58 | IPR001471 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | ProSiteProfiles | AP2/ERF domain profile. | 9 | 66 | IPR001471 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | CDD | AP2 | 8 | 64 | IPR001471 | GO:0003700|GO:0006355 | |
Prci12g1720 | 195 | MobiDBLite | consensus disorder prediction | 98 | 123 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Prci12g1720 | Prci-Chr12 | 34931027 | 34932291 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Prci12g1720 | 4 | 185 | AP2-EREBP Transcription Factor Family | AT5G25190 | 53.514 | 1.84e-57 | 177 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2/ERF-ERF | Prci12g1720 | AP2 | 2.8e-12 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Prci12g1720 | - | - | gmx:100777851 | 183.341 |