Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1720 ATGGGAAGAGGAAGACCCCAGCAACGGTATCGCGGTGTTCGCCAGAGGCATTGGGGCTCCTGGGTCTCCGAGATTCGGCACCCCACCTTGAAGACGAGAATATGGCTGGGGACATTTGAAACAGCAGAAGATGCTGCGAGAGCCTATGACGAAGCAGCCAGGCTTATGTGTGGCCCCAAAGCCATAACCAATCTCTCTCCTCCTCCTCCTCCTTCTTCCTCTCACTTTCTCTCTCCAACTTTAACAGCCAAGCTTCTTCACAAGTGCCACATGGCTCCCCTTTCCCTCCCGATGAAGAAGAAACACCAGTCCCAGCAACATCGTCCTCGTCATCATCAACCAGCTGAAGAAGAGGAATTACAGACGCAGACATCTGTTAATTATCCCTCCGCCGGCAATTCTGTCGCCCAACCGAGCTCTGACACCGGATTTTTCCGGTGGCCGGAGAATGCGAAACATGAGGAGGAAAGACTTCAGGTGGAAGTGCTTGAAGATGATGACATTGAGCAGATGATTCAAGAGTTACTTCATTATGGCTCTGTTGAGCTTTCTTCTTCTCCCTCTCCTTCGTTGAACCAACATTCATGA 588 0.5102 MGRGRPQQRYRGVRQRHWGSWVSEIRHPTLKTRIWLGTFETAEDAARAYDEAARLMCGPKAITNLSPPPPPSSSHFLSPTLTAKLLHKCHMAPLSLPMKKKHQSQQHRPRHHQPAEEEELQTQTSVNYPSAGNSVAQPSSDTGFFRWPENAKHEEERLQVEVLEDDDIEQMIQELLHYGSVELSSSPSPSLNQHS 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1720 195 Gene3D AP2/ERF domain 8 66 IPR036955 GO:0003700|GO:0006355
Prci12g1720 195 FunFam Ethylene-responsive transcription factor 2 8 67 - -
Prci12g1720 195 SUPERFAMILY DNA-binding domain 9 66 IPR016177 GO:0003677
Prci12g1720 195 PANTHER DEHYDRATION-RESPONSIVE ELEMENT-BINDING PROTEIN 2C 8 167 - -
Prci12g1720 195 PRINTS Ethylene responsive element binding protein signature 10 21 IPR001471 GO:0003700|GO:0006355
Prci12g1720 195 PRINTS Ethylene responsive element binding protein signature 32 48 IPR001471 GO:0003700|GO:0006355
Prci12g1720 195 SMART rav1_2 9 72 IPR001471 GO:0003700|GO:0006355
Prci12g1720 195 Pfam AP2 domain 9 58 IPR001471 GO:0003700|GO:0006355
Prci12g1720 195 ProSiteProfiles AP2/ERF domain profile. 9 66 IPR001471 GO:0003700|GO:0006355
Prci12g1720 195 CDD AP2 8 64 IPR001471 GO:0003700|GO:0006355
Prci12g1720 195 MobiDBLite consensus disorder prediction 98 123 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1720 Prci-Chr12 34931027 34932291 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1720 4 185 AP2-EREBP Transcription Factor Family AT5G25190 53.514 1.84e-57 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Prci12g1720 AP2 2.8e-12 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1720 - - gmx:100777851 183.341