Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1715 ATGGACGAGTTTTTAGCACTAATTTGCCCTAATTCTCCAACGGTATGGGATGGAAAGGGATTCTCAGAGTGTTTCGAAGATATGGCTTTAGGTTTTGGACTGAATGCAGTGACTATTGTTATAACTGTTGTGATTGGGTTCACAAACAAAAGCAGTCGAGGAATTCAAAGATCAGACAGCCAGATGGCCCTTTCAAAGAAGCTTTTCTTTCATCTTGTACCAGCTGTTGGAGCATGTGGTTCATTGTTGGACATGATATTTCTATGGAGGAGAGAAATTAACAGGCACTTTGTTGGTTATCATAAGTGGTTTTATAGCTGTTCTGAGTTGATGGTGTGGACAAATATCATTCTCTTCTCAAGGTGTGTCAGCAGTCATTATATGCTTTGCAACTATGTTTTGTGTTACTGGTGGATTCTGAAGCCACTATTCTGGATCTTCCATTTGCTTACAAAGTTCCCATTGCTGGAGACTCCAATATGTGTTGTGGAAAGCTCTATTCTTCTCTTGAATATCACATTTGGCATAGCCATCAATGTCATAAGAGTAAAAACATTATCTTCCAAAAACAGTTCATTTGAAGATCCACTTCTTTCCAATGATATGGACCTTGAGGAAGGTAGCCATTGCGACCCTGAAGAAAAAACTAGGAACTTTTGTGATTTGATGACTTTCAAATTCATAAATCCTGTAATGAACCATGGTGTGGTTAAACAACTGGACTTCGATGATCTTTTGCAACTTCCTCGAGACTTGGATCCTTCTTCCTGTCATGATATAATTTTGACCTGTTGGCAAGCACAACTGAGAAATAATGGTTCAAACCCATCTTTACTTAGAGCAGTCTGCTGTGCATATGGATGGCCTTATCTCCGCCTGGGTTTATTGAAGGTGGTTAATGATTGTCTTGGTTTTGCTGGACCATTGCTTCTCAATAAACTGATCCGGTTTCTTCAACAAGGCACAGAGAGTTTTGATGGATATTTATTTGCCATGTCCTTGGGCCTCACATCTGTAATTAAATCCTTTTTAGATACACAATATAGTTTTCATCTTTCCAAACTGAAGCTAAAGCTACGGTCTAGTATCATGACTCTAATCTATCACAAGTGTCTACGTGTGAACCTAGCAGAGCGTTCAAAATTCTCTAATGGAGAAATTCAGACATTTATGTCTGTTGATGCTGACCGAACTGTCAACATGTGTAATAGTTTCCATGATATGTGGAGCTTGCCTTTACAAATTGGAGTGGCGCTATATCTTTTGTATACTCAAGTCAAATTTGCGTTTCTATCTGGATTAGCAATTACCATTTTGTTGATACCAGTCAATAAATGGATATCAAAATTGATTGCAGATGCAACTGAGAAAATGATGAAGCAGAAGGATGAACGGATACGGAGGACAGGGGAACTTTTGACTTATATTCGCACTTTGAAGATGCATGGATGGGAACTTCTTTTTTCTGATTGGCTGATGGAGACAAGATCTTCTGAACTGAAACACTTGGCTACTCGGAAGTACTTGGATGCATGGTGTGTCTTCTTTTGGGCTACGACGCCAACTCTCTTTTCTCTTTTTACATTTGGACTCTATGCATTGATGGGGTACCAACTTGATGCTGCAATGGTTTTTACTTGTCTGGCTTTGTTTAACACGTTAATTTCACCACTGAATTCATTCCCTTGGGTGATTAATGGATTGATTGATGCTGTTGTATCCTCCAGGCGGTTGAGCAGGTTTCTTTCTTGTCCTGAAAATAAATCTAAGGTGAAAGAGATCAATTCATGTTCCTTGCCATTCCACAATGAACAACCTGACTCTTTACAAGGCTTAGCAGTCTTTGTCCATGATGCATGTTTTACGTGGTCTAGTAGTGATGAAGAAACATTAAATTTGGTGTTGAACCATGTCAGTCTAAGCTTGTCAAGGGGTTCCTTTGTTGCAGTGATAGGAGAGGTTGGTTCTGGGAAATCATCGCTGTTATATTCAATTCTTGGAGAAACACGGCTTGCTCATGGATCAATTAACTCTGATAGATCAGTGGCATATGTACCACAGGTCCCGTGGATTTTATCTGGAACAATACGTGACAACATAATATTTGGGAAAAATTATGATCCCCAAAGGTATGCAGAAACTGTGAGAGCATGTGCTCTAGATGTCGATATCTCATTAATGGTTGGAGGAGACATGGCTTACATTGGGGAAAAGGGAGTTAACTTATCTGGTGGACAAAGAACTCGTCTTGCTTTAGCCAGGGCATTGTATCATGGCTGTGATGTGATTATGCTTGATGATGTCCTGAGTACAGTTGATGCACAAGTTGCTCGATGGATCTTGCACAATGCCATTCTCGGTCCTCTTGTGCAGGGAAAAACTCGATTGCTTTGTACTCATAATATTCAGGCAATATCCTCTGCTGATATGGTTGTTATAATGGACAAAGGAAACATAAAGTGGGTGGGAAGTCCAAATGACCTCCAGGTCTCTTCATATATAACATTTTCCCCATTGAATGAACTTGATTCAGATGTACGGAATCAAGGAAAATCTTGCTGCACAAATTCTTCTTCCAAATTAAAAGAACTCTCAGATAGAGAAATTAAACATGTTGTGGAGGGTACTGAGGAGAACATCGAAGCTGAGTTGAGGAAAGAGGGAAAAGTGGAACTTGGAGTGTATAAGAACTACGCTATGTTCACTGGCTGGTTCATTACAGTTGTCATATGCCTGTCAGCTGTTCTAATGCAAGCTTCTCGTAATGGAAATGATTTATGGTTGTCATTTTGGGTTGATACAACAGAAAGCAGACAAACAAGATATTCTCTTTCCTTTTACCTGGCTATACTGGGTCTCTTTTGCATCATAAATTCTTTGCTCACATTGGTGAGGGCGTTCTCTTTTGCATTTGGTGGCTTACAAGCAGCAACTAAAGTGCACAACAGAATGCTTGGTGATCTTATCAATGCACCTGTGCAATTCTTTGATCAGACCCCAGGTGGAAGAATACTGAACAGGTTTTCCTCAGATCTTTATACAATTGATGACTCTCTTCCGTTCATTATGAACATTCTCCTAGCTAATTTTGTTGGCCTCTTGGGCATTGCAGTAGTTGTGTCATATGTTCAGGTTTTTTTCTTAATCCTGCTATTGCCATTTTGGTATATCTACAGTAGACTCCAGTTCTTCTACAGGTCAACATCAAGAGAACTACGACGACTAGACAGTGTTTCTCGTTCTCCAATTTATACATCTTTCACTGAAACGCTCGATGGTTCATCAACTATTAGGGCATTCAAATCTGAGGACCTATTTTTTGCCAAGTTCACTGAACACGTGACATTGTATCAGAAGACTTCTTACACGGAGACAGCAGCCAGTTTATGGCTTTCCTTACGTCTTCAATTATTAGCTGCATTTATCATCTCATTTATTGCACTGATGGCTGTGGTTGGAGCTCATGGCAGTCTGCCAATCAACTTTGGCACTCCTGGGCTGGTAGGATTGGCACTCTCATATGCAGCTCCGATAGTGTCCTTGTTGGGAAGCTTTTTAACAAGTGTCACTGAAACAGAAAAGGAAATGGTTTCAGTTGAAAGAGTCCTTGAATATATGGACATTCCTCAAGAAGAAATTGCTGGACGCCTAACCTTGAACCCTGATTGGCCAAATCAAGGAGTAATTGAGTTCCAAAATGTTACTTTAAAATACAAGCCATCTTTGCCACCTGCACTATCCAATCTTAGTTTTACAATTGGTGGAGGGACACAGATTGGAATTATTGGAAGAACAGGTGCTGGAAAGTCTAGTGTGTTGAATGCTCTTTTCCGCCTTACCCCAATATGTACAGGCTCTATTTTCATTGATGGCATAAACATTAACGATATTCCTGTCAGAGAACTACGTGCTCGTTTAGCTGTTGTTCCTCAGAGTCCATTTCTGTTTGAAGGATCATTAAGGGATAATCTAGATCCATTCCGAATGCATGGTGACTTGAAAATTTGGAATGCCTTGGAGAAATGCCATGTGAAAGAGGAAGTAGAAGCAGCTGGAGGGTTGAATATGCTCGTAAAGGAATCTGGGTCATCGTTTTCTGTTGGCCAAAGGCAACTTCTTTGCCTTGCACGTGCTCTTCTCAAATCTTCAAAGGTTCTCTGTTTGGATGAGTGTACAGCCAATGTGGACACACAAACTGCTTCACTGCTGCAAAGTACCATATGTGATGAATGCAAGGGCATGACAGTAATTACAATTGCTCACCGGATCTCGACAGTTTTAAATATGGACAACATTTTAATCCTTGACCATGGGGACCTGGCTGAACAAGGAAATCCACAGGTTCTTATCAAACATGAATCCTTATTCTCCAGTTTTGCCAAAGCTTCATCAATGTGA 4398 0.4025 MDEFLALICPNSPTVWDGKGFSECFEDMALGFGLNAVTIVITVVIGFTNKSSRGIQRSDSQMALSKKLFFHLVPAVGACGSLLDMIFLWRREINRHFVGYHKWFYSCSELMVWTNIILFSRCVSSHYMLCNYVLCYWWILKPLFWIFHLLTKFPLLETPICVVESSILLLNITFGIAINVIRVKTLSSKNSSFEDPLLSNDMDLEEGSHCDPEEKTRNFCDLMTFKFINPVMNHGVVKQLDFDDLLQLPRDLDPSSCHDIILTCWQAQLRNNGSNPSLLRAVCCAYGWPYLRLGLLKVVNDCLGFAGPLLLNKLIRFLQQGTESFDGYLFAMSLGLTSVIKSFLDTQYSFHLSKLKLKLRSSIMTLIYHKCLRVNLAERSKFSNGEIQTFMSVDADRTVNMCNSFHDMWSLPLQIGVALYLLYTQVKFAFLSGLAITILLIPVNKWISKLIADATEKMMKQKDERIRRTGELLTYIRTLKMHGWELLFSDWLMETRSSELKHLATRKYLDAWCVFFWATTPTLFSLFTFGLYALMGYQLDAAMVFTCLALFNTLISPLNSFPWVINGLIDAVVSSRRLSRFLSCPENKSKVKEINSCSLPFHNEQPDSLQGLAVFVHDACFTWSSSDEETLNLVLNHVSLSLSRGSFVAVIGEVGSGKSSLLYSILGETRLAHGSINSDRSVAYVPQVPWILSGTIRDNIIFGKNYDPQRYAETVRACALDVDISLMVGGDMAYIGEKGVNLSGGQRTRLALARALYHGCDVIMLDDVLSTVDAQVARWILHNAILGPLVQGKTRLLCTHNIQAISSADMVVIMDKGNIKWVGSPNDLQVSSYITFSPLNELDSDVRNQGKSCCTNSSSKLKELSDREIKHVVEGTEENIEAELRKEGKVELGVYKNYAMFTGWFITVVICLSAVLMQASRNGNDLWLSFWVDTTESRQTRYSLSFYLAILGLFCIINSLLTLVRAFSFAFGGLQAATKVHNRMLGDLINAPVQFFDQTPGGRILNRFSSDLYTIDDSLPFIMNILLANFVGLLGIAVVVSYVQVFFLILLLPFWYIYSRLQFFYRSTSRELRRLDSVSRSPIYTSFTETLDGSSTIRAFKSEDLFFAKFTEHVTLYQKTSYTETAASLWLSLRLQLLAAFIISFIALMAVVGAHGSLPINFGTPGLVGLALSYAAPIVSLLGSFLTSVTETEKEMVSVERVLEYMDIPQEEIAGRLTLNPDWPNQGVIEFQNVTLKYKPSLPPALSNLSFTIGGGTQIGIIGRTGAGKSSVLNALFRLTPICTGSIFIDGININDIPVRELRARLAVVPQSPFLFEGSLRDNLDPFRMHGDLKIWNALEKCHVKEEVEAAGGLNMLVKESGSSFSVGQRQLLCLARALLKSSKVLCLDECTANVDTQTASLLQSTICDECKGMTVITIAHRISTVLNMDNILILDHGDLAEQGNPQVLIKHESLFSSFAKASSM 1465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1715 1465 SMART AAA_5 1255 1439 IPR003593 GO:0016887
Prci12g1715 1465 SMART AAA_5 644 818 IPR003593 GO:0016887
Prci12g1715 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 613 830 IPR027417 -
Prci12g1715 1465 Gene3D - 1214 1460 IPR027417 -
Prci12g1715 1465 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 215 1462 - -
Prci12g1715 1465 ProSitePatterns ABC transporters family signature. 742 756 IPR017871 GO:0005524|GO:0016887
Prci12g1715 1465 SUPERFAMILY ABC transporter transmembrane region 284 586 IPR036640 GO:0005524|GO:0016020
Prci12g1715 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1229 1462 IPR003439 GO:0005524
Prci12g1715 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 908 1194 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci12g1715 1465 Pfam ABC transporter 1246 1393 IPR003439 GO:0005524
Prci12g1715 1465 FunFam ABC transporter C family member 13 595 850 - -
Prci12g1715 1465 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 295 570 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci12g1715 1465 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1223 1460 IPR027417 -
Prci12g1715 1465 CDD ABCC_MRP_domain1 616 817 - -
Prci12g1715 1465 Pfam ABC transporter 635 767 IPR003439 GO:0005524
Prci12g1715 1465 FunFam ABC transporter C family member 5 873 1212 - -
Prci12g1715 1465 FunFam ATP-binding cassette subfamily C member 10 270 587 - -
Prci12g1715 1465 SUPERFAMILY ABC transporter transmembrane region 904 1211 IPR036640 GO:0005524|GO:0016020
Prci12g1715 1465 FunFam ATP-binding cassette (ABC) transporter, putative 1216 1462 - -
Prci12g1715 1465 Gene3D ABC transporter type 1, transmembrane domain 873 1212 IPR036640 GO:0005524|GO:0016020
Prci12g1715 1465 Gene3D ABC transporter type 1, transmembrane domain 267 588 IPR036640 GO:0005524|GO:0016020
Prci12g1715 1465 CDD ABC_6TM_MRP7_D1_like 293 578 - -
Prci12g1715 1465 CDD ABCC_MRP_domain2 1227 1446 - -
Prci12g1715 1465 ProSitePatterns ABC transporters family signature. 1365 1379 IPR017871 GO:0005524|GO:0016887
Prci12g1715 1465 Gene3D - 590 852 IPR027417 -
Prci12g1715 1465 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 614 841 IPR003439 GO:0005524
Prci12g1715 1465 CDD ABC_6TM_MRP7_D2_like 907 1206 - -
Prci12g1715 1465 Pfam ABC transporter transmembrane region 294 558 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Prci12g1715 1465 Pfam ABC transporter transmembrane region 909 1156 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1715 Prci-Chr12 34844608 34870668 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1715 606 863 Calmodulin-binding Proteins AT2G36910 28.000 4.17e-21 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1715 K05674 - gmx:100814181 2291.54