Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1710 ATGCTTAGTTTAATCAGAGGTTCAGGATTTTTAAGGCTTTTATCTAGATATATAGAGCTGAAGGGAGATTTTTTTTTTTCTCAAGGGGTTTCAGTTCTCATAGCTTCTTTTAGATTAGATTTGGATTTGGAAGCTGCTATGGATTGTTCATCTTGGGTCAACACGTCCTTGGATCTGAACATTAGACCTCATCATCACATGCTTCATGAAGAAGTTCCAAAAAAGGAGGTGGAAAGCAAATTTTTCTCAACTGGGAAGAAATCTTCTGTAAAAGGAGAGTCATTTCAGACAAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTGAGTGCAGAGAACAAGAAGTTGACAGAAATGCTCACAGAGATGTGTGAGAATTACAATTCTCTTAGAAGACACTTGGCGGAATACATGAGAAACAATCCTCAAAAGGATCTTCACAACACCATCCCTTCAAAGAAAAGGAAGCCTGACAGCAGCAGCAACAACAACAACACTAATAGTAATCCCGTGGTAATTAATGGCACCTCTGAAAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCAAAGGAAGGCTCCAACAAAGCAAAAGTTTCCAAAGCTTATGTCAGGACTGAATCATCTGATACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAATATGGGCAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGTCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGACCAATCTATTCTGGTTGCAACATATCTAGGTGAGCACAATCATCCTCATCCTTCTCAGATGGACACCACAACATCAGGATCTGGCCGTTTTGTGAACCAAGCTTCAGCTTCCGTACCATGTTCATCAGCATCTCCGACCTCTTCCTCTGCACCGGCAACAATTACCTTTGACTTGACAAAAGCCAAATCCAGCATCAACAACATGAATACCACTACCACCTCCACCAAGAACCCTCAATCGAAAGCTGATTCGCCGGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCCTCTTCCTTAACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCTGCCATTTCGGGAAGAATGTCCCACATGAATTAA 1140 0.4237 MLSLIRGSGFLRLLSRYIELKGDFFFSQGVSVLIASFRLDLDLEAAMDCSSWVNTSLDLNIRPHHHMLHEEVPKKEVESKFFSTGKKSSVKGESFQTSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAEYMRNNPQKDLHNTIPSKKRKPDSSSNNNNTNSNPVVINGTSESCSTDEESCKKPKEGSNKAKVSKAYVRTESSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMDTTTSGSGRFVNQASASVPCSSASPTSSSAPATITFDLTKAKSSINNMNTTTTSTKNPQSKADSPEVPQVLVEQMASSLTKDPNFRAALVAAISGRMSHMN 379
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1710 379 Gene3D WRKY domain 196 276 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g1710 379 MobiDBLite consensus disorder prediction 323 342 - -
Prci12g1710 379 MobiDBLite consensus disorder prediction 154 180 - -
Prci12g1710 379 SMART WRKY_cls 214 274 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g1710 379 SUPERFAMILY WRKY DNA-binding domain 210 275 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g1710 379 MobiDBLite consensus disorder prediction 181 197 - -
Prci12g1710 379 FunFam WRKY transcription factor 40 199 276 - -
Prci12g1710 379 Coils Coil 98 125 - -
Prci12g1710 379 MobiDBLite consensus disorder prediction 140 198 - -
Prci12g1710 379 Pfam WRKY DNA -binding domain 215 273 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g1710 379 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 75 375 IPR044810 GO:0003700
Prci12g1710 379 MobiDBLite consensus disorder prediction 323 345 - -
Prci12g1710 379 ProSiteProfiles WRKY domain profile. 209 275 IPR003657 GO:0003700|GO:0006355|GO:0043565
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1710 Prci-Chr12 34778911 34781003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1710 50 379 WRKY Transcription Factor Family AT1G80840 48.949 3.42e-95 285
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci12g1710 WRKY 1.5e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1710 - - pcin:129289519 699.123