Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1709 ATGCTTAGTTTAATCAGAGGTTCAGGATTTTTAAGGCTTTTATCTAGATATATAGAGCTGAAGGGAGATTTTTTTTTTTCTCAAGGGGTTTCAGTTCTCATAGCTTCTTTTAGATTAGATTTGGATTTGGAAGCTGCTATGGATTGTTCATCTTGGGTCAACACGTCCTTGGATCTGAACATTAGACCTCATCATCACATGCTTCATGAAGAAGTTCCAAAAAAGGAGGTGGAAAGCAAATTTTTCTCAACTGGGAAGAAATCTTCTGTAAAAGGAGAGACAAGTGGTGCGTTGGAGGATGAACTGAAGAGGGTGAGTGCAGAGAACAAGAAGTTGACAGAAATGCTCACAGAGATGTGTGAGAATTACAATTCTCTTAGAAGACACTTGGCGGAATACATGAGAAACAATCCTCAAAAGGATCTTCACAACACCATCCCTTCAAAGAAAAGGAAGCCTGACAGCAGCAGCAACAACAACAACACTAATAGTAATCCCGTGGTAATTAATGGCACCTCTGAAAGCTGCTCAACTGATGAAGAATCATGCAAGAAACCAAAGGAAGGCTCCAACAAAGCAAAAGTTTCCAAAGCTTATGTCAGGACTGAATCATCTGATACTAGCCTGATTGTGAAGGATGGATATCAATGGAGGAAATATGGGCAAAAGGTGACCAGGGATAACCCTTCTCCAAGAGCATACTTCAAATGCTCTTTTGCTCCAAGCTGTCCTGTCAAAAAGAAGGTGCAAAGAAGTGTGGAAGACCAATCTATTCTGGTTGCAACATATCTAGGTGAGCACAATCATCCTCATCCTTCTCAGATGGACACCACAACATCAGGATCTGGCCGTTTTGTGAACCAAGCTTCAGCTTCCGTACCATGTTCATCAGCATCTCCGACCTCTTCCTCTGCACCGGCAACAATTACCTTTGACTTGACAAAAGCCAAATCCAGCATCAACAACATGAATACCACTACCACCTCCACCAAGAACCCTCAATCGAAAGCTGATTCGCCGGAAGTCCCTCAGGTTTTGGTGGAACAGATGGCCTCTTCCTTAACTAAAGATCCCAATTTCAGAGCAGCACTTGTTGCTGCCATTTCGGGAAGAATGTCCCACATGAATTAA 1131 0.4244 MLSLIRGSGFLRLLSRYIELKGDFFFSQGVSVLIASFRLDLDLEAAMDCSSWVNTSLDLNIRPHHHMLHEEVPKKEVESKFFSTGKKSSVKGETSGALEDELKRVSAENKKLTEMLTEMCENYNSLRRHLAEYMRNNPQKDLHNTIPSKKRKPDSSSNNNNTNSNPVVINGTSESCSTDEESCKKPKEGSNKAKVSKAYVRTESSDTSLIVKDGYQWRKYGQKVTRDNPSPRAYFKCSFAPSCPVKKKVQRSVEDQSILVATYLGEHNHPHPSQMDTTTSGSGRFVNQASASVPCSSASPTSSSAPATITFDLTKAKSSINNMNTTTTSTKNPQSKADSPEVPQVLVEQMASSLTKDPNFRAALVAAISGRMSHMN 376
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1709 376 SMART WRKY_cls 211 271 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g1709 376 MobiDBLite consensus disorder prediction 320 342 - -
Prci12g1709 376 MobiDBLite consensus disorder prediction 178 194 - -
Prci12g1709 376 MobiDBLite consensus disorder prediction 320 339 - -
Prci12g1709 376 SUPERFAMILY WRKY DNA-binding domain 207 272 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g1709 376 ProSiteProfiles WRKY domain profile. 206 272 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g1709 376 PANTHER WRKY TRANSCRIPTION FACTOR 36-RELATED 61 372 IPR044810 GO:0003700
Prci12g1709 376 FunFam WRKY transcription factor 40 196 273 - -
Prci12g1709 376 Coils Coil 95 122 - -
Prci12g1709 376 MobiDBLite consensus disorder prediction 137 195 - -
Prci12g1709 376 Gene3D WRKY domain 193 273 IPR036576 GO:0003700|GO:0006355|GO:0043565
Prci12g1709 376 Pfam WRKY DNA -binding domain 212 270 IPR003657 GO:0003700|GO:0006355|GO:0043565
Prci12g1709 376 MobiDBLite consensus disorder prediction 151 177 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1709 Prci-Chr12 34778897 34781003 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1709 50 376 WRKY Transcription Factor Family AT1G80840 49.394 8.87e-96 286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF WRKY Prci12g1709 WRKY 1.4e-22 CL0274
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1709 - - pcin:129289519 687.952