Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1708 ATGTCCGGCCAAAGCCAGCGTCTTAATGTGGTTCCCACAGTCACAATGCTTGGAGTCATGAAGGCTCGCCTTGTTGGAGCCACGCGAGGCCATGCTCTTCTCAAAAAGAAGAGTGATGCTCTGACTGTTCAGTTCCGTTCCATCCTCAAGAAGATCGTCTCCACCAAGGAATCAATGGGGGAGATCATGAAAACTTCTTCTTTTGCACTAACTGAAGCCAAGTACGTTGCTGGTGATAACATCAAACATGTTGTGCTAGAGAATGTTCGAGAAGCTTCCTTAAAGGTTCGTTCTCGTCAAGAGAACGTAGCTGGTGTTAAGCTTCCCAAGTTTGAGTACACAAATGATGGCGAGGTCACCAAGAATGATCTTACTGGATTAGCAAGGGGTGGGCAACAAGTTCAGCAGTGCCGTGCTGCTTATATTAAGGCAATTGAAGTTCTTGTTGAACTTGCTTCACTTCAGACATCCTTCTTGACACTTGATGAGGCTATCAAGACGACGAATCGGAGAGTGAATGCCCTTGAAAATGTGGTCAAGCCTAGGTTGGAGAATACCATCAGTTATATTAAGGGAGAGTTGGATGAACTAGAAAGAGAGGATTTCTTTAGGTTGAAGAAGATTCAAGGGTATAAGAAGAGAGAAATAGAGAGGCAGAGGTTGATGGCTAAGCAGTTCGCTGAGGAACAGGTTGCTGAGAAAATTTCATTGCAGAAAGGAATTTCACTGAATTCAGCCCACAACATGTTGTCTGCTGCAACTGAGAAAGATGAGGACATCATTTTCTAA 789 0.4423 MSGQSQRLNVVPTVTMLGVMKARLVGATRGHALLKKKSDALTVQFRSILKKIVSTKESMGEIMKTSSFALTEAKYVAGDNIKHVVLENVREASLKVRSRQENVAGVKLPKFEYTNDGEVTKNDLTGLARGGQQVQQCRAAYIKAIEVLVELASLQTSFLTLDEAIKTTNRRVNALENVVKPRLENTISYIKGELDELEREDFFRLKKIQGYKKREIERQRLMAKQFAEEQVAEKISLQKGISLNSAHNMLSAATEKDEDIIF 262
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1708 262 NCBIfam V-type ATP synthase subunit D 9 213 IPR002699 GO:0046961
Prci12g1708 262 PANTHER V-TYPE ATP SYNTHASE SUBUNIT D 1 262 IPR002699 GO:0046961
Prci12g1708 262 FunFam V-type proton ATPase subunit D 1 199 - -
Prci12g1708 262 Pfam ATP synthase subunit D 17 209 IPR002699 GO:0046961
Prci12g1708 262 Coils Coil 180 200 - -
Prci12g1708 262 Gene3D - 1 199 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1708 Prci-Chr12 34758001 34759665 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1708 1 262 Primary Pumps ATPases(2) AT3G58730 82.443 5.42e-161 445
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1708 K02149 - tcc:18612121 461.07