Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Prci12g1699 ATGTCTAGCATTAAAGCAATGGTTGTAATAGCAATATTACTATTATGGGATGTTATTTCTTTGTCCCATAACACTGCTGCCACCATAGCAGAAGAGAAACATGCTCTACTTGAAAGCAGATGGTGGAATACTAGCCATGGTAGGTTCAACTTCATAATCTCAAACCATTGTGAATGGAATGGCATAACATGCAATGACTTTGGAAGCATTATCGAGATTCAGATGCCACGTGTTGCTGCACAACAGCCTCGACTTGGAGATCTTAACTTCACTGCATTTTCCAATCTGAAAATTTTATCTCTCATTGGAATGAGGCTGACAGGTACCATTCTGACTCAAATAGGAGCTCTACGGAATCTCATTCATCTAAACTTGGCATACAACGACCTTGTTGGTGAGTTACCTTCCAGCCTTATCAACCTCACTCGGTTAGAATCGTTGGATTTGACAGGAAACAATTTTGGCACAGCTAGAATTCTTGATCTTGAGTCATCCAATCAAACTCTTTTAATTGGTACCTATGGTTATATTGCTCCAGAGCAAGCATATACCTTGGTCGTGACTGAAAAATGTGATGTCTATAGTTTTGTAGTAGTGGTATTAGAAATCATCATTGGAAAGCATCCTGGAGATTTGATATTGTATTTGTCAGAGGACAATACTGAAAGCATTTTCTTAAAGGATATCTTGGACCCACGTCTTCCACTTCCCTTGCGAAAAGATGCAAAAGATTTGATTCTTTCAATCACAGTAGCATTAGCGTGCCTACATCCCTCGTCAAAATCTCGACCATCAATGAAGCAAGTCACTCAAACTCTCTCGTTCTCCAAGTTGCAACTAGCCACTCCTTTCAATGGCATTTCATTCAAACATTTAATGAACCAAGACATATAA 894 0.3915 MSSIKAMVVIAILLLWDVISLSHNTAATIAEEKHALLESRWWNTSHGRFNFIISNHCEWNGITCNDFGSIIEIQMPRVAAQQPRLGDLNFTAFSNLKILSLIGMRLTGTILTQIGALRNLIHLNLAYNDLVGELPSSLINLTRLESLDLTGNNFGTARILDLESSNQTLLIGTYGYIAPEQAYTLVVTEKCDVYSFVVVVLEIIIGKHPGDLILYLSEDNTESIFLKDILDPRLPLPLRKDAKDLILSITVALACLHPSSKSRPSMKQVTQTLSFSKLQLATPFNGISFKHLMNQDI 297
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Prci12g1699 297 ProSiteProfiles Protein kinase domain profile. 1 275 IPR000719 GO:0004672|GO:0005524|GO:0006468
Prci12g1699 297 SUPERFAMILY L domain-like 52 166 - -
Prci12g1699 297 Pfam Protein tyrosine and serine/threonine kinase 154 273 IPR001245 GO:0004672|GO:0006468
Prci12g1699 297 Gene3D Ribonuclease Inhibitor 22 169 IPR032675 -
Prci12g1699 297 SUPERFAMILY Protein kinase-like (PK-like) 153 284 IPR011009 -
Prci12g1699 297 PANTHER LEUCINE RICH REPEAT KINASE 2 55 154 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Prci12g1699 Prci-Chr12 34617132 34620072 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Prci12g1699 153 274 Receptor kinase-like Gene Family AT5G65700 36.296 1.15e-17 81.6
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Prci12g1699 PK_Tyr_Ser-Thr 4.2e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Prci12g1699 - - pcin:129298823 495.352
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Prci13g1282 13 11337907 11343566 Prci12g1699 12 34617132 34620072 CCT
Prci12g1699 12 34617132 34620072 Prci12g1699 12 34617132 34620072 ECH